EuRBPDB

Description

Ensembl ID: MGP_PWKPhJ_G0032646 (Gene tree)
Gene ID: -
Gene Symbol: Chd9
Alias: 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|Kiaa0308|PRIC320|Pric320|mKIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 225787 bases
Position: chr8:87293310-87519096
Accession: 1924001
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0089486	ResIII	PF04851.15	4.8e-06	1	1
MGP_PWKPhJ_P0089487	ResIII	PF04851.15	4.8e-06	1	1
MGP_PWKPhJ_P0089487	BRK	PF07533.16	3.1e-30	1	2
MGP_PWKPhJ_P0089487	BRK	PF07533.16	3.1e-30	2	2
MGP_PWKPhJ_P0089486	BRK	PF07533.16	3.1e-30	1	2
MGP_PWKPhJ_P0089486	BRK	PF07533.16	3.1e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0089489	-	2504	-	MGP_PWKPhJ_P0089489	716 (aa)	-	-
MGP_PWKPhJ_T0089486	-	11818	XM_006530568	MGP_PWKPhJ_P0089486	2885 (aa)	XP_006530631	Q8BYH8
MGP_PWKPhJ_T0089487	-	11770	-	MGP_PWKPhJ_P0089487	2869 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0032646	Chd9	74	61.654	MGP_PWKPhJ_G0025723	Chd6	87	69.720
MGP_PWKPhJ_G0032646	Chd9	82	70.874	MGP_PWKPhJ_G0026915	Chd7	94	54.243