EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0032940 (Gene tree)
Gene ID: -
Gene Symbol: Snai3
Alias: AI643946|Smuc|Snail-related gene from muscle cells|Zfp293
Full Name: snail family zinc finger 3
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 6520 bases
Position: chr8:119790067-119796586
Accession: 1353563
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0090379	zf-C2H2	PF00096.26	3.2e-24	1	4
MGP_PWKPhJ_P0090379	zf-C2H2	PF00096.26	3.2e-24	2	4
MGP_PWKPhJ_P0090379	zf-C2H2	PF00096.26	3.2e-24	3	4
MGP_PWKPhJ_P0090379	zf-C2H2	PF00096.26	3.2e-24	4	4
MGP_PWKPhJ_P0090379	zf-met	PF12874.7	3.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0090379	-	1585	XM_006531074	MGP_PWKPhJ_P0090379	287 (aa)	XP_006531137	Q9QY31

Gene Model

Click here to download MGP_PWKPhJ_G0032940's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0032940's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0032940	Snai3	100	40.667	MGP_PWKPhJ_G0025828	Snai1	99	41.333
MGP_PWKPhJ_G0032940	Snai3	67	47.297	MGP_PWKPhJ_G0023554	Zfp236	57	36.242
MGP_PWKPhJ_G0032940	Snai3	99	46.552	MGP_PWKPhJ_G0021550	Snai2	99	46.599
MGP_PWKPhJ_G0032940	Snai3	55	42.336	MGP_PWKPhJ_G0029639	Prdm5	68	48.544