EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0033183 (Gene tree)
Gene ID: -
Gene Symbol: Elavl3
Alias: 2600009P04Rik|Huc|PLE21|mHuC
Full Name: ELAV (embryonic lethal%2C abnormal vision%2C Drosophila)-like 3 (Hu antigen C)
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 37803 bases
Position: chr9:18889670-18927472
Accession: 109157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0091083	RRM_5	PF13893.6	4.2e-13	1	2
MGP_PWKPhJ_P0091083	RRM_5	PF13893.6	4.2e-13	2	2
MGP_PWKPhJ_P0091083	RRM_1	PF00076.22	5.4e-64	1	3
MGP_PWKPhJ_P0091083	RRM_1	PF00076.22	5.4e-64	2	3
MGP_PWKPhJ_P0091083	RRM_1	PF00076.22	5.4e-64	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0091083	-	5098	XM_006510021	MGP_PWKPhJ_P0091083	367 (aa)	XP_006510084	Q60900
MGP_PWKPhJ_T0091084	-	1014	-	MGP_PWKPhJ_P0091084	337 (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0033183's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0033183's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0033183	Elavl3	92	36.145	MGP_PWKPhJ_G0022132	Pabpc6	62	36.145
MGP_PWKPhJ_G0033183	Elavl3	99	80.323	MGP_PWKPhJ_G0027434	Elavl4	99	79.893
MGP_PWKPhJ_G0033183	Elavl3	77	38.272	MGP_PWKPhJ_G0016671	Celf5	65	38.462
MGP_PWKPhJ_G0033183	Elavl3	62	37.500	MGP_PWKPhJ_G0016597	Cirbp	79	37.500
MGP_PWKPhJ_G0033183	Elavl3	90	36.145	MGP_PWKPhJ_G0026090	Pabpc4l	96	36.145
MGP_PWKPhJ_G0033183	Elavl3	59	31.098	MGP_PWKPhJ_G0025746	Pabpc1l	63	38.889
MGP_PWKPhJ_G0033183	Elavl3	63	37.931	MGP_PWKPhJ_G0034096	Rbms3	70	38.562
MGP_PWKPhJ_G0033183	Elavl3	70	39.506	MGP_PWKPhJ_G0023160	Celf4	67	39.744
MGP_PWKPhJ_G0033183	Elavl3	73	40.741	MGP_PWKPhJ_G0024279	Celf2	82	34.667
MGP_PWKPhJ_G0033183	Elavl3	69	33.708	MGP_PWKPhJ_G0034409	Rbmx	86	33.708
MGP_PWKPhJ_G0033183	Elavl3	71	42.391	MGP_PWKPhJ_G0025058	Celf1	57	43.590
MGP_PWKPhJ_G0033183	Elavl3	100	78.400	MGP_PWKPhJ_G0027303	Elavl2	100	79.292
MGP_PWKPhJ_G0033183	Elavl3	90	34.940	MGP_PWKPhJ_G0023321	Pabpc2	61	34.940
MGP_PWKPhJ_G0033183	Elavl3	90	37.179	MGP_PWKPhJ_G0029778	Tia1	98	31.169
MGP_PWKPhJ_G0033183	Elavl3	80	41.975	MGP_PWKPhJ_G0033610	Celf6	57	42.308
MGP_PWKPhJ_G0033183	Elavl3	89	34.940	MGP_PWKPhJ_G0026435	Celf3	98	35.632
MGP_PWKPhJ_G0033183	Elavl3	92	36.145	MGP_PWKPhJ_G0020798	Pabpc1	78	36.145
MGP_PWKPhJ_G0033183	Elavl3	50	36.207	MGP_PWKPhJ_G0024701	Rbms1	51	33.645