EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0033610 (Gene tree)
Gene ID: -
Gene Symbol: Celf6
Alias: 6330569O16Rik|Brunol6
Full Name: CUGBP%2C Elav-like family member 6
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 32967 bases
Position: chr9:56917613-56950579
Accession: 1923433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0092261	RRM_1	PF00076.22	2.1e-51	1	3
MGP_PWKPhJ_P0092261	RRM_1	PF00076.22	2.1e-51	2	3
MGP_PWKPhJ_P0092261	RRM_1	PF00076.22	2.1e-51	3	3
MGP_PWKPhJ_P0092259	RRM_1	PF00076.22	2.6e-51	1	3
MGP_PWKPhJ_P0092259	RRM_1	PF00076.22	2.6e-51	2	3
MGP_PWKPhJ_P0092259	RRM_1	PF00076.22	2.6e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0092262	-	449	-	-	- (aa)	-	-
MGP_PWKPhJ_T0092263	-	591	-	-	- (aa)	-	-
MGP_PWKPhJ_T0092260	-	2880	-	MGP_PWKPhJ_P0092260	162 (aa)	-	-
MGP_PWKPhJ_T0092261	-	3313	-	MGP_PWKPhJ_P0092261	460 (aa)	-	-
MGP_PWKPhJ_T0092259	-	2929	-	MGP_PWKPhJ_P0092259	481 (aa)	-	-
MGP_PWKPhJ_T0092258	-	3054	XM_006511540	MGP_PWKPhJ_P0092258	182 (aa)	XP_006511603	Q7TN33

Gene Model

Click here to download MGP_PWKPhJ_G0033610's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0033610's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0033610	Celf6	91	45.567	MGP_PWKPhJ_G0024279	Celf2	79	80.952
MGP_PWKPhJ_G0033610	Celf6	95	35.802	MGP_PWKPhJ_G0027434	Elavl4	85	40.741
MGP_PWKPhJ_G0033610	Celf6	57	42.308	MGP_PWKPhJ_G0033183	Elavl3	80	41.975
MGP_PWKPhJ_G0033610	Celf6	89	37.037	MGP_PWKPhJ_G0027303	Elavl2	78	40.741
MGP_PWKPhJ_G0033610	Celf6	75	85.526	MGP_PWKPhJ_G0026435	Celf3	80	87.368
MGP_PWKPhJ_G0033610	Celf6	77	39.062	MGP_PWKPhJ_G0022132	Pabpc6	64	39.062
MGP_PWKPhJ_G0033610	Celf6	52	42.105	MGP_PWKPhJ_G0034096	Rbms3	82	42.105
MGP_PWKPhJ_G0033610	Celf6	51	34.483	MGP_PWKPhJ_G0034702	Pabpc5	63	34.483
MGP_PWKPhJ_G0033610	Celf6	100	67.200	MGP_PWKPhJ_G0023160	Celf4	99	67.066
MGP_PWKPhJ_G0033610	Celf6	54	36.250	MGP_PWKPhJ_G0016957	Rbms2	52	36.250
MGP_PWKPhJ_G0033610	Celf6	66	32.500	MGP_PWKPhJ_G0017360	Hnrnpab	65	31.414
MGP_PWKPhJ_G0033610	Celf6	55	36.986	MGP_PWKPhJ_G0020798	Pabpc1	67	36.986
MGP_PWKPhJ_G0033610	Celf6	62	32.955	MGP_PWKPhJ_G0029778	Tia1	85	36.000
MGP_PWKPhJ_G0033610	Celf6	91	45.549	MGP_PWKPhJ_G0025058	Celf1	98	45.135
MGP_PWKPhJ_G0033610	Celf6	75	84.783	MGP_PWKPhJ_G0016671	Celf5	100	66.443