EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0033651 (Gene tree)
Gene ID: -
Gene Symbol: Rab11a
Alias: Rab11|Rab11A
Full Name: RAB11A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 26539 bases
Position: chr9:62172453-62198991
Accession: 1858202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0092444	MMR_HSR1	PF01926.23	2.4e-07	1	1
MGP_PWKPhJ_P0092445	MMR_HSR1	PF01926.23	2.5e-07	1	1
MGP_PWKPhJ_P0092439	MMR_HSR1	PF01926.23	5.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0092442	-	500	-	MGP_PWKPhJ_P0092442	86 (aa)	-	-
MGP_PWKPhJ_T0092443	-	397	-	-	- (aa)	-	-
MGP_PWKPhJ_T0092440	-	726	-	MGP_PWKPhJ_P0092440	86 (aa)	-	-
MGP_PWKPhJ_T0092441	-	603	-	-	- (aa)	-	-
MGP_PWKPhJ_T0092446	-	695	-	-	- (aa)	-	-
MGP_PWKPhJ_T0092444	-	462	-	MGP_PWKPhJ_P0092444	153 (aa)	-	-
MGP_PWKPhJ_T0092445	-	595	-	MGP_PWKPhJ_P0092445	155 (aa)	-	-
MGP_PWKPhJ_T0092439	-	6123	-	MGP_PWKPhJ_P0092439	216 (aa)	-	P62492

Gene Model

Click here to download MGP_PWKPhJ_G0033651's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0033651's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0033651	Rab11a	93	41.379	MGP_PWKPhJ_G0026098	Rab33b	85	37.799
MGP_PWKPhJ_G0033651	Rab11a	89	42.143	MGP_PWKPhJ_G0034766	Rab9b	86	41.040
MGP_PWKPhJ_G0033651	Rab11a	89	43.885	MGP_PWKPhJ_G0018439	Rab37	77	45.181
MGP_PWKPhJ_G0033651	Rab11a	100	50.000	MGP_PWKPhJ_G0017160	Rab1a	85	52.299
MGP_PWKPhJ_G0033651	Rab11a	92	34.752	MGP_PWKPhJ_G0015037	Rab23	80	32.984
MGP_PWKPhJ_G0033651	Rab11a	74	30.303	MGP_PWKPhJ_G0018632	Dnajc27	60	30.303
MGP_PWKPhJ_G0033651	Rab11a	91	46.763	MGP_PWKPhJ_G0018926	Rab15	93	40.887
MGP_PWKPhJ_G0033651	Rab11a	94	35.780	MGP_PWKPhJ_G0016465	Rab36	79	35.780
MGP_PWKPhJ_G0033651	Rab11a	84	38.281	MGP_PWKPhJ_G0031319	Rab6a	84	35.955
MGP_PWKPhJ_G0033651	Rab11a	75	40.000	MGP_PWKPhJ_G0021239	Rabl2	67	37.908
MGP_PWKPhJ_G0033651	Rab11a	88	49.265	MGP_PWKPhJ_G0034524	Rab39b	82	46.857
MGP_PWKPhJ_G0033651	Rab11a	91	56.835	MGP_PWKPhJ_G0026914	Rab2a	81	54.971
MGP_PWKPhJ_G0033651	Rab11a	95	54.110	MGP_PWKPhJ_G0024594	Rab14	99	54.362
MGP_PWKPhJ_G0033651	Rab11a	88	48.148	MGP_PWKPhJ_G0022839	Rab5a	91	41.951
MGP_PWKPhJ_G0033651	Rab11a	81	31.746	MGP_PWKPhJ_G0033871	Mras	85	32.768
MGP_PWKPhJ_G0033651	Rab11a	95	70.748	MGP_PWKPhJ_G0026295	Rab25	99	62.150
MGP_PWKPhJ_G0033651	Rab11a	81	34.921	MGP_PWKPhJ_G0031945	Hras	85	37.654
MGP_PWKPhJ_G0033651	Rab11a	68	30.065	MGP_PWKPhJ_G0015652	Arl8a	77	30.065
MGP_PWKPhJ_G0033651	Rab11a	86	34.586	MGP_PWKPhJ_G0028189	Rheb	89	32.927
MGP_PWKPhJ_G0033651	Rab11a	81	34.127	MGP_PWKPhJ_G0030278	Kras	87	37.725
MGP_PWKPhJ_G0033651	Rab11a	90	40.426	MGP_PWKPhJ_G0034357	Rab33a	74	39.665
MGP_PWKPhJ_G0033651	Rab11a	90	43.796	MGP_PWKPhJ_G0022939	Rab12	84	37.799
MGP_PWKPhJ_G0033651	Rab11a	88	31.293	MGP_PWKPhJ_G0029192	Rasl11a	60	31.293
MGP_PWKPhJ_G0033651	Rab11a	90	43.066	MGP_PWKPhJ_G0025872	Rab22a	81	42.038
MGP_PWKPhJ_G0033651	Rab11a	88	49.630	MGP_PWKPhJ_G0018235	Rab5c	90	41.262
MGP_PWKPhJ_G0033651	Rab11a	91	56.115	MGP_PWKPhJ_G0020303	Rab2b	95	51.366
MGP_PWKPhJ_G0033651	Rab11a	87	38.686	MGP_PWKPhJ_G0029808	Rab7	91	45.833
MGP_PWKPhJ_G0033651	Rab11a	97	52.201	MGP_PWKPhJ_G0023645	Rab1b	84	55.357
MGP_PWKPhJ_G0033651	Rab11a	88	35.821	MGP_PWKPhJ_G0033895	Rab6b	77	35.404
MGP_PWKPhJ_G0033651	Rab11a	100	96.078	MGP_PWKPhJ_G0022511	Rab11b	100	90.367
MGP_PWKPhJ_G0033651	Rab11a	94	39.423	MGP_PWKPhJ_G0034923	Rab9	91	39.423
MGP_PWKPhJ_G0033651	Rab11a	93	48.252	MGP_PWKPhJ_G0023083	Rab18	78	47.531
MGP_PWKPhJ_G0033651	Rab11a	91	44.604	MGP_PWKPhJ_G0031259	Rab30	97	37.981
MGP_PWKPhJ_G0033651	Rab11a	93	42.254	MGP_PWKPhJ_G0022930	Rab31	86	41.071
MGP_PWKPhJ_G0033651	Rab11a	78	31.746	MGP_PWKPhJ_G0018767	Arl4a	60	31.746
MGP_PWKPhJ_G0033651	Rab11a	79	39.669	MGP_PWKPhJ_G0030381	Rasl2-9	70	36.364