EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0033928 (Gene tree)
Gene ID: -
Gene Symbol: Poc1a
Alias: 2510040D07Rik|Wdr51a|cha
Full Name: POC1 centriolar protein A
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 71107 bases
Position: chr9:103930169-104001275
Accession: 1917485
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0093730	eIF2A	PF08662.11	2.7e-10	1	1
MGP_PWKPhJ_P0093729	eIF2A	PF08662.11	4.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0093733	-	533	-	-	- (aa)	-	-
MGP_PWKPhJ_T0093729	-	1696	XM_006511831	MGP_PWKPhJ_P0093729	405 (aa)	XP_006511894	Q8JZX3
MGP_PWKPhJ_T0093731	-	1417	-	-	- (aa)	-	-
MGP_PWKPhJ_T0093730	-	1242	-	MGP_PWKPhJ_P0093730	356 (aa)	-	-
MGP_PWKPhJ_T0093732	-	727	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0033928's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0033928's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0033928	Poc1a	93	32.716	MGP_PWKPhJ_G0026549	Wdr3	61	30.818
MGP_PWKPhJ_G0033928	Poc1a	83	34.109	MGP_PWKPhJ_G0021777	Wdr5b	92	34.135
MGP_PWKPhJ_G0033928	Poc1a	80	30.037	MGP_PWKPhJ_G0023813	Prpf19	55	30.037
MGP_PWKPhJ_G0033928	Poc1a	83	35.659	MGP_PWKPhJ_G0024460	Wdr5	98	30.973
MGP_PWKPhJ_G0033928	Poc1a	81	32.353	MGP_PWKPhJ_G0033538	Wdr61	97	31.658
MGP_PWKPhJ_G0033928	Poc1a	82	30.000	MGP_PWKPhJ_G0027213	Prpf4	56	30.000
MGP_PWKPhJ_G0033928	Poc1a	80	36.364	MGP_PWKPhJ_G0025369	Ciao1	85	36.364