EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0033933 (Gene tree)
Gene ID: -
Gene Symbol: Pcbp4
Alias: 1200003L19Rik|AlphaCP-4
Full Name: poly(rC) binding protein 4
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 11613 bases
Position: chr9:104110153-104121765
Accession: 1890471
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0093762	KH_1	PF00013.29	3.4e-50	1	3
MGP_PWKPhJ_P0093762	KH_1	PF00013.29	3.4e-50	2	3
MGP_PWKPhJ_P0093762	KH_1	PF00013.29	3.4e-50	3	3
MGP_PWKPhJ_P0093764	KH_1	PF00013.29	2.8e-32	1	2
MGP_PWKPhJ_P0093764	KH_1	PF00013.29	2.8e-32	2	2
MGP_PWKPhJ_P0093771	KH_1	PF00013.29	1.6e-21	1	1
MGP_PWKPhJ_P0093759	KH_1	PF00013.29	1.3e-18	1	1
MGP_PWKPhJ_P0093766	KH_1	PF00013.29	2.3e-15	1	1
MGP_PWKPhJ_P0093768	KH_1	PF00013.29	1.2e-13	1	1
MGP_PWKPhJ_P0093773	KH_1	PF00013.29	5.5e-09	1	1
MGP_PWKPhJ_P0093764	KH_2	PF07650.17	8.4e-12	1	1
MGP_PWKPhJ_P0093759	KH_2	PF07650.17	2.3e-06	1	1
MGP_PWKPhJ_P0093766	KH_2	PF07650.17	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0093759	-	651	XM_006511779	MGP_PWKPhJ_P0093759	119 (aa)	XP_006511842	A0A087WP16
MGP_PWKPhJ_T0093764	-	893	-	MGP_PWKPhJ_P0093764	197 (aa)	-	-
MGP_PWKPhJ_T0093766	-	752	-	MGP_PWKPhJ_P0093766	113 (aa)	-	-
MGP_PWKPhJ_T0093767	-	253	-	-	- (aa)	-	-
MGP_PWKPhJ_T0093760	-	389	-	-	- (aa)	-	-
MGP_PWKPhJ_T0093761	-	610	-	-	- (aa)	-	-
MGP_PWKPhJ_T0093762	-	1987	-	MGP_PWKPhJ_P0093762	403 (aa)	-	-
MGP_PWKPhJ_T0093763	-	381	-	-	- (aa)	-	-
MGP_PWKPhJ_T0093765	-	477	-	-	- (aa)	-	-
MGP_PWKPhJ_T0093768	-	232	-	MGP_PWKPhJ_P0093768	77 (aa)	-	-
MGP_PWKPhJ_T0093769	-	846	-	MGP_PWKPhJ_P0093769	150 (aa)	-	-
MGP_PWKPhJ_T0093771	-	770	-	MGP_PWKPhJ_P0093771	168 (aa)	-	-
MGP_PWKPhJ_T0093774	-	450	-	-	- (aa)	-	-
MGP_PWKPhJ_T0093773	-	924	-	MGP_PWKPhJ_P0093773	215 (aa)	-	-
MGP_PWKPhJ_T0093770	-	289	-	-	- (aa)	-	-
MGP_PWKPhJ_T0093772	-	314	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0033933's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0033933's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0033933	Pcbp4	93	70.652	MGP_PWKPhJ_G0016505	Pcbp3	85	69.811
MGP_PWKPhJ_G0033933	Pcbp4	73	32.558	MGP_PWKPhJ_G0022900	Khsrp	50	34.091
MGP_PWKPhJ_G0033933	Pcbp4	97	67.826	MGP_PWKPhJ_G0029781	Pcbp1	98	53.541
MGP_PWKPhJ_G0033933	Pcbp4	85	31.731	MGP_PWKPhJ_G0021667	Igf2bp2	62	31.111
MGP_PWKPhJ_G0033933	Pcbp4	76	33.684	MGP_PWKPhJ_G0026865	Fubp1	72	34.524
MGP_PWKPhJ_G0033933	Pcbp4	51	38.462	MGP_PWKPhJ_G0018780	Nova1	52	38.462
MGP_PWKPhJ_G0033933	Pcbp4	98	66.321	MGP_PWKPhJ_G0021414	Pcbp2	97	59.877
MGP_PWKPhJ_G0033933	Pcbp4	86	33.728	MGP_PWKPhJ_G0019652	Hnrnpk	78	32.414
MGP_PWKPhJ_G0033933	Pcbp4	76	41.538	MGP_PWKPhJ_G0030519	-	54	41.538
MGP_PWKPhJ_G0033933	Pcbp4	84	32.039	MGP_PWKPhJ_G0018073	Igf2bp1	59	30.597
MGP_PWKPhJ_G0033933	Pcbp4	83	36.000	MGP_PWKPhJ_G0024530	Fubp3	70	36.000