EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0034096 (Gene tree)
Gene ID: -
Gene Symbol: Rbms3
Alias: 6720477E09Rik|8430436O14Rik
Full Name: RNA binding motif%2C single stranded interacting protein
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 1086781 bases
Position: chr9:114572452-115659232
Accession: 2444477
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0094732	RRM_1	PF00076.22	1.6e-32	1	2
MGP_PWKPhJ_P0094732	RRM_1	PF00076.22	1.6e-32	2	2
MGP_PWKPhJ_P0094729	RRM_1	PF00076.22	1.2e-31	1	2
MGP_PWKPhJ_P0094729	RRM_1	PF00076.22	1.2e-31	2	2
MGP_PWKPhJ_P0094727	RRM_1	PF00076.22	1.4e-31	1	2
MGP_PWKPhJ_P0094727	RRM_1	PF00076.22	1.4e-31	2	2
MGP_PWKPhJ_P0094724	RRM_1	PF00076.22	1.5e-31	1	2
MGP_PWKPhJ_P0094724	RRM_1	PF00076.22	1.5e-31	2	2
MGP_PWKPhJ_P0094728	RRM_1	PF00076.22	1.6e-31	1	2
MGP_PWKPhJ_P0094728	RRM_1	PF00076.22	1.6e-31	2	2
MGP_PWKPhJ_P0094723	RRM_1	PF00076.22	1.7e-31	1	2
MGP_PWKPhJ_P0094723	RRM_1	PF00076.22	1.7e-31	2	2
MGP_PWKPhJ_P0094726	RRM_1	PF00076.22	2e-31	1	2
MGP_PWKPhJ_P0094726	RRM_1	PF00076.22	2e-31	2	2
MGP_PWKPhJ_P0094730	RRM_1	PF00076.22	2.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0094725	-	1634	-	MGP_PWKPhJ_P0094725	185 (aa)	-	-
MGP_PWKPhJ_T0094724	-	3422	-	MGP_PWKPhJ_P0094724	414 (aa)	-	-
MGP_PWKPhJ_T0094727	-	2265	-	MGP_PWKPhJ_P0094727	402 (aa)	-	-
MGP_PWKPhJ_T0094726	-	2226	-	MGP_PWKPhJ_P0094726	463 (aa)	-	-
MGP_PWKPhJ_T0094723	-	7912	XM_017313248	MGP_PWKPhJ_P0094723	431 (aa)	XP_017168737	Q8BWL5
MGP_PWKPhJ_T0094732	-	619	-	MGP_PWKPhJ_P0094732	206 (aa)	-	-
MGP_PWKPhJ_T0094733	-	1440	-	-	- (aa)	-	-
MGP_PWKPhJ_T0094730	-	585	-	MGP_PWKPhJ_P0094730	194 (aa)	-	-
MGP_PWKPhJ_T0094731	-	2029	-	-	- (aa)	-	-
MGP_PWKPhJ_T0094729	-	1980	-	MGP_PWKPhJ_P0094729	386 (aa)	-	-
MGP_PWKPhJ_T0094728	-	2335	-	MGP_PWKPhJ_P0094728	415 (aa)	-	-
MGP_PWKPhJ_T0094734	-	1736	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0034096's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0034096's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0034096	Rbms3	70	38.562	MGP_PWKPhJ_G0033183	Elavl3	63	37.931
MGP_PWKPhJ_G0034096	Rbms3	75	37.079	MGP_PWKPhJ_G0024279	Celf2	77	39.474
MGP_PWKPhJ_G0034096	Rbms3	77	31.447	MGP_PWKPhJ_G0025746	Pabpc1l	59	31.447
MGP_PWKPhJ_G0034096	Rbms3	68	43.421	MGP_PWKPhJ_G0025058	Celf1	53	43.421
MGP_PWKPhJ_G0034096	Rbms3	76	39.474	MGP_PWKPhJ_G0026435	Celf3	91	39.474
MGP_PWKPhJ_G0034096	Rbms3	77	33.708	MGP_PWKPhJ_G0022132	Pabpc6	60	34.091
MGP_PWKPhJ_G0034096	Rbms3	83	37.097	MGP_PWKPhJ_G0027434	Elavl4	80	33.333
MGP_PWKPhJ_G0034096	Rbms3	99	80.841	MGP_PWKPhJ_G0024701	Rbms1	96	71.538
MGP_PWKPhJ_G0034096	Rbms3	93	36.134	MGP_PWKPhJ_G0016671	Celf5	57	42.105
MGP_PWKPhJ_G0034096	Rbms3	83	37.222	MGP_PWKPhJ_G0027303	Elavl2	69	37.209
MGP_PWKPhJ_G0034096	Rbms3	83	80.663	MGP_PWKPhJ_G0016957	Rbms2	86	66.484
MGP_PWKPhJ_G0034096	Rbms3	72	40.789	MGP_PWKPhJ_G0023160	Celf4	68	40.789
MGP_PWKPhJ_G0034096	Rbms3	82	42.105	MGP_PWKPhJ_G0033610	Celf6	52	42.105