EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0034411 (Gene tree)
Gene ID: -
Gene Symbol: Zic3
Alias: Bn|Ka
Full Name: zinc finger protein of the cerebellum 3
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 19008 bases
Position: chrX:37977504-37996511
Accession: 106676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0095771	zf-C2H2	PF00096.26	8.7e-23	1	4
MGP_PWKPhJ_P0095771	zf-C2H2	PF00096.26	8.7e-23	2	4
MGP_PWKPhJ_P0095771	zf-C2H2	PF00096.26	8.7e-23	3	4
MGP_PWKPhJ_P0095771	zf-C2H2	PF00096.26	8.7e-23	4	4
MGP_PWKPhJ_P0095770	zf-C2H2	PF00096.26	3.4e-21	1	4
MGP_PWKPhJ_P0095770	zf-C2H2	PF00096.26	3.4e-21	2	4
MGP_PWKPhJ_P0095770	zf-C2H2	PF00096.26	3.4e-21	3	4
MGP_PWKPhJ_P0095770	zf-C2H2	PF00096.26	3.4e-21	4	4
MGP_PWKPhJ_P0095772	zf-C2H2	PF00096.26	2.1e-20	1	4
MGP_PWKPhJ_P0095772	zf-C2H2	PF00096.26	2.1e-20	2	4
MGP_PWKPhJ_P0095772	zf-C2H2	PF00096.26	2.1e-20	3	4
MGP_PWKPhJ_P0095772	zf-C2H2	PF00096.26	2.1e-20	4	4
MGP_PWKPhJ_P0095771	zf-met	PF12874.7	8e-05	1	1
MGP_PWKPhJ_P0095772	zf-met	PF12874.7	0.00078	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0095771	-	2980	-	MGP_PWKPhJ_P0095771	246 (aa)	-	-
MGP_PWKPhJ_T0095770	-	3949	-	MGP_PWKPhJ_P0095770	466 (aa)	-	-
MGP_PWKPhJ_T0095772	-	1948	-	MGP_PWKPhJ_P0095772	456 (aa)	-	-
MGP_PWKPhJ_T0095769	-	566	XM_006527973	MGP_PWKPhJ_P0095769	89 (aa)	XP_006528036	Q62521

Gene Model

Click here to download MGP_PWKPhJ_G0034411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0034411's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0034411	Zic3	64	38.849	MGP_PWKPhJ_G0021550	Snai2	50	38.776
MGP_PWKPhJ_G0034411	Zic3	64	33.540	MGP_PWKPhJ_G0025843	Zfp64	56	33.540