EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0012677 (Gene tree)
Gene ID: 110334059
Gene Symbol: Supt5
Alias: Spt5|Supt5h
Full Name: SPT5 homolog%2C DSIF elongation factor subunit
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 24864 bases
Position: chr1:1303517-1328380
Accession: 110334059
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0015229	KOW	PF00467.29	5.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0015229	-	3508	XM_021215905	MGP_PahariEiJ_P0015229	1083 (aa)	XP_021071564	UPI000A30821C
MGP_PahariEiJ_T0015228	-	3527	-	MGP_PahariEiJ_P0015228	1079 (aa)	-	UPI000A309DC5

Gene Model

Click here to download MGP_PahariEiJ_G0012677's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0012677's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0012677	Supt5	100	97.151	ENSG00000196235	SUPT5H	100	100.000	Homo_sapiens
MGP_PahariEiJ_G0012677	Supt5	94	81.693	ENSAPOG00000012970	supt5h	96	81.791	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0012677	Supt5	100	97.151	ENSAMEG00000008382	SUPT5H	100	97.151	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0012677	Supt5	94	67.581	ENSACIG00000021245	supt5h	93	69.442	Amphilophus_citrinellus
MGP_PahariEiJ_G0012677	Supt5	94	86.588	ENSAOCG00000001136	supt5h	96	85.378	Amphiprion_ocellaris
MGP_PahariEiJ_G0012677	Supt5	94	82.087	ENSAPEG00000021060	supt5h	96	82.069	Amphiprion_percula
MGP_PahariEiJ_G0012677	Supt5	94	88.264	ENSATEG00000002626	supt5h	99	85.820	Anabas_testudineus
MGP_PahariEiJ_G0012677	Supt5	100	92.336	ENSACAG00000000375	SUPT5H	100	92.336	Anolis_carolinensis
MGP_PahariEiJ_G0012677	Supt5	100	97.059	ENSANAG00000033469	SUPT5H	100	97.059	Aotus_nancymaae
MGP_PahariEiJ_G0012677	Supt5	94	85.335	ENSACLG00000011374	supt5h	95	85.335	Astatotilapia_calliptera
MGP_PahariEiJ_G0012677	Supt5	94	89.381	ENSAMXG00000009128	supt5h	99	87.142	Astyanax_mexicanus
MGP_PahariEiJ_G0012677	Supt5	100	97.151	ENSBTAG00000010467	SUPT5H	100	97.151	Bos_taurus
MGP_PahariEiJ_G0012677	Supt5	88	39.672	WBGene00005015	spt-5	90	39.568	Caenorhabditis_elegans
MGP_PahariEiJ_G0012677	Supt5	100	97.151	ENSCJAG00000014182	SUPT5H	100	97.151	Callithrix_jacchus
MGP_PahariEiJ_G0012677	Supt5	100	97.059	ENSCAFG00000005469	SUPT5H	100	97.059	Canis_familiaris
MGP_PahariEiJ_G0012677	Supt5	99	93.948	ENSCAFG00020015732	SUPT5H	99	96.329	Canis_lupus_dingo
MGP_PahariEiJ_G0012677	Supt5	100	97.151	ENSCHIG00000023821	SUPT5H	100	97.151	Capra_hircus
MGP_PahariEiJ_G0012677	Supt5	99	96.075	ENSTSYG00000010636	SUPT5H	99	96.075	Carlito_syrichta
MGP_PahariEiJ_G0012677	Supt5	98	95.202	ENSCAPG00000008285	SUPT5H	100	95.202	Cavia_aperea
MGP_PahariEiJ_G0012677	Supt5	100	97.059	ENSCPOG00000011367	SUPT5H	100	97.059	Cavia_porcellus
MGP_PahariEiJ_G0012677	Supt5	100	97.151	ENSCCAG00000034052	SUPT5H	100	97.151	Cebus_capucinus
MGP_PahariEiJ_G0012677	Supt5	100	97.243	ENSCATG00000035589	SUPT5H	100	97.243	Cercocebus_atys
MGP_PahariEiJ_G0012677	Supt5	100	96.967	ENSCLAG00000013796	SUPT5H	100	96.967	Chinchilla_lanigera
MGP_PahariEiJ_G0012677	Supt5	100	97.243	ENSCSAG00000003826	SUPT5H	100	97.243	Chlorocebus_sabaeus
MGP_PahariEiJ_G0012677	Supt5	99	93.043	ENSCPBG00000018792	SUPT5H	100	95.652	Chrysemys_picta_bellii
MGP_PahariEiJ_G0012677	Supt5	94	59.095	ENSCING00000021624	-	93	61.359	Ciona_intestinalis
MGP_PahariEiJ_G0012677	Supt5	99	61.031	ENSCSAVG00000000030	-	99	59.188	Ciona_savignyi
MGP_PahariEiJ_G0012677	Supt5	100	97.243	ENSCANG00000043752	SUPT5H	100	97.243	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0012677	Supt5	100	98.618	ENSCGRG00001012522	Supt5	100	98.618	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0012677	Supt5	97	99.053	ENSCGRG00000006779	Supt5	97	99.053	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0012677	Supt5	94	80.957	ENSCSEG00000015699	supt5h	97	81.481	Cynoglossus_semilaevis
MGP_PahariEiJ_G0012677	Supt5	71	68.052	ENSCSEG00000017151	-	94	67.792	Cynoglossus_semilaevis
MGP_PahariEiJ_G0012677	Supt5	94	87.230	ENSCVAG00000007501	supt5h	94	86.816	Cyprinodon_variegatus
MGP_PahariEiJ_G0012677	Supt5	94	88.529	ENSDARG00000042724	supt5h	99	86.150	Danio_rerio
MGP_PahariEiJ_G0012677	Supt5	96	96.944	ENSDNOG00000033920	SUPT5H	100	96.944	Dasypus_novemcinctus
MGP_PahariEiJ_G0012677	Supt5	100	90.472	ENSDORG00000016582	Supt5	100	91.489	Dipodomys_ordii
MGP_PahariEiJ_G0012677	Supt5	94	54.207	FBgn0040273	Spt5	90	54.413	Drosophila_melanogaster
MGP_PahariEiJ_G0012677	Supt5	54	94.891	ENSETEG00000009497	-	54	94.891	Echinops_telfairi
MGP_PahariEiJ_G0012677	Supt5	89	75.544	ENSEBUG00000011892	supt5h	99	75.337	Eptatretus_burgeri
MGP_PahariEiJ_G0012677	Supt5	100	96.310	ENSEASG00005011861	SUPT5H	100	96.884	Equus_asinus_asinus
MGP_PahariEiJ_G0012677	Supt5	100	96.402	ENSECAG00000013309	SUPT5H	100	97.254	Equus_caballus
MGP_PahariEiJ_G0012677	Supt5	97	86.944	ENSEEUG00000012879	SUPT5H	99	85.606	Erinaceus_europaeus
MGP_PahariEiJ_G0012677	Supt5	98	86.431	ENSELUG00000011402	supt5h	98	87.167	Esox_lucius
MGP_PahariEiJ_G0012677	Supt5	100	97.151	ENSFCAG00000010744	SUPT5H	100	97.151	Felis_catus
MGP_PahariEiJ_G0012677	Supt5	100	96.967	ENSFDAG00000015803	SUPT5H	100	96.967	Fukomys_damarensis
MGP_PahariEiJ_G0012677	Supt5	94	85.884	ENSFHEG00000012497	supt5h	95	85.785	Fundulus_heteroclitus
MGP_PahariEiJ_G0012677	Supt5	99	72.544	ENSGMOG00000003422	supt5h	93	74.125	Gadus_morhua
MGP_PahariEiJ_G0012677	Supt5	97	79.434	ENSGACG00000004934	supt5h	99	78.938	Gasterosteus_aculeatus
MGP_PahariEiJ_G0012677	Supt5	92	94.652	ENSGAGG00000019112	SUPT5H	99	95.759	Gopherus_agassizii
MGP_PahariEiJ_G0012677	Supt5	100	97.151	ENSGGOG00000014425	SUPT5H	100	97.140	Gorilla_gorilla
MGP_PahariEiJ_G0012677	Supt5	94	88.409	ENSHBUG00000017144	supt5h	94	88.409	Haplochromis_burtoni
MGP_PahariEiJ_G0012677	Supt5	100	97.059	ENSHGLG00000018339	SUPT5H	100	97.059	Heterocephalus_glaber_female
MGP_PahariEiJ_G0012677	Supt5	100	96.507	ENSHGLG00100017126	SUPT5H	100	96.507	Heterocephalus_glaber_male
MGP_PahariEiJ_G0012677	Supt5	94	86.444	ENSHCOG00000004932	supt5h	94	86.542	Hippocampus_comes
MGP_PahariEiJ_G0012677	Supt5	94	89.339	ENSIPUG00000007308	supt5h	94	89.339	Ictalurus_punctatus
MGP_PahariEiJ_G0012677	Supt5	100	97.151	ENSSTOG00000026638	SUPT5H	100	97.151	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0012677	Supt5	100	98.343	ENSJJAG00000022374	Supt5	100	98.343	Jaculus_jaculus
MGP_PahariEiJ_G0012677	Supt5	94	84.691	ENSKMAG00000004401	supt5h	94	84.789	Kryptolebias_marmoratus
MGP_PahariEiJ_G0012677	Supt5	100	89.299	ENSLACG00000008663	SUPT5H	100	89.299	Latimeria_chalumnae
MGP_PahariEiJ_G0012677	Supt5	84	78.331	ENSLOCG00000014703	SUPT5H	87	91.825	Lepisosteus_oculatus
MGP_PahariEiJ_G0012677	Supt5	100	92.216	ENSLAFG00000027736	SUPT5H	100	93.040	Loxodonta_africana
MGP_PahariEiJ_G0012677	Supt5	100	97.243	ENSMFAG00000038707	SUPT5H	100	97.243	Macaca_fascicularis
MGP_PahariEiJ_G0012677	Supt5	100	97.243	ENSMMUG00000019372	SUPT5H	100	97.243	Macaca_mulatta
MGP_PahariEiJ_G0012677	Supt5	100	97.243	ENSMNEG00000041553	SUPT5H	100	97.243	Macaca_nemestrina
MGP_PahariEiJ_G0012677	Supt5	100	97.243	ENSMLEG00000036432	SUPT5H	100	97.243	Mandrillus_leucophaeus
MGP_PahariEiJ_G0012677	Supt5	94	87.882	ENSMAMG00000019715	supt5h	94	88.276	Mastacembelus_armatus
MGP_PahariEiJ_G0012677	Supt5	94	88.235	ENSMZEG00005024864	supt5h	94	88.235	Maylandia_zebra
MGP_PahariEiJ_G0012677	Supt5	94	95.196	ENSMGAG00000012449	SUPT5H	100	92.811	Meleagris_gallopavo
MGP_PahariEiJ_G0012677	Supt5	100	93.796	ENSMAUG00000009006	Supt5	100	93.889	Mesocricetus_auratus
MGP_PahariEiJ_G0012677	Supt5	100	97.151	ENSMICG00000006115	SUPT5H	100	97.151	Microcebus_murinus
MGP_PahariEiJ_G0012677	Supt5	100	98.985	ENSMOCG00000012211	Supt5	100	98.985	Microtus_ochrogaster
MGP_PahariEiJ_G0012677	Supt5	94	86.575	ENSMMOG00000009770	supt5h	97	86.065	Mola_mola
MGP_PahariEiJ_G0012677	Supt5	94	88.218	ENSMODG00000013570	SUPT5H	99	88.574	Monodelphis_domestica
MGP_PahariEiJ_G0012677	Supt5	99	85.978	ENSMALG00000017833	supt5h	96	87.179	Monopterus_albus
MGP_PahariEiJ_G0012677	Supt5	100	99.538	MGP_CAROLIEiJ_G0029441	Supt5	100	99.538	Mus_caroli
MGP_PahariEiJ_G0012677	Supt5	100	99.446	ENSMUSG00000003435	Supt5	100	99.446	Mus_musculus
MGP_PahariEiJ_G0012677	Supt5	100	99.631	MGP_SPRETEiJ_G0030539	Supt5	100	99.631	Mus_spretus
MGP_PahariEiJ_G0012677	Supt5	100	97.151	ENSMPUG00000017721	SUPT5H	100	97.151	Mustela_putorius_furo
MGP_PahariEiJ_G0012677	Supt5	100	96.694	ENSMLUG00000013886	-	100	96.694	Myotis_lucifugus
MGP_PahariEiJ_G0012677	Supt5	100	90.766	ENSMLUG00000008079	-	95	93.039	Myotis_lucifugus
MGP_PahariEiJ_G0012677	Supt5	100	98.802	ENSNGAG00000022458	Supt5	100	98.802	Nannospalax_galili
MGP_PahariEiJ_G0012677	Supt5	80	80.995	ENSNBRG00000005030	supt5h	71	80.995	Neolamprologus_brichardi
MGP_PahariEiJ_G0012677	Supt5	99	90.419	ENSNLEG00000014365	SUPT5H	99	94.981	Nomascus_leucogenys
MGP_PahariEiJ_G0012677	Supt5	93	89.552	ENSMEUG00000016423	SUPT5H	99	89.718	Notamacropus_eugenii
MGP_PahariEiJ_G0012677	Supt5	97	92.264	ENSOPRG00000016844	SUPT5H	100	91.977	Ochotona_princeps
MGP_PahariEiJ_G0012677	Supt5	100	96.875	ENSODEG00000016445	SUPT5H	100	96.875	Octodon_degus
MGP_PahariEiJ_G0012677	Supt5	94	88.212	ENSONIG00000001100	supt5h	94	88.212	Oreochromis_niloticus
MGP_PahariEiJ_G0012677	Supt5	81	90.827	ENSOANG00000008175	SUPT5H	100	90.147	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0012677	Supt5	100	96.679	ENSOCUG00000002155	SUPT5H	100	96.679	Oryctolagus_cuniculus
MGP_PahariEiJ_G0012677	Supt5	94	86.824	ENSORLG00000000394	supt5h	94	86.824	Oryzias_latipes
MGP_PahariEiJ_G0012677	Supt5	94	86.922	ENSORLG00020021680	supt5h	94	86.922	Oryzias_latipes_hni
MGP_PahariEiJ_G0012677	Supt5	94	86.922	ENSORLG00015010686	supt5h	94	86.922	Oryzias_latipes_hsok
MGP_PahariEiJ_G0012677	Supt5	100	96.967	ENSOGAG00000033979	SUPT5H	100	96.967	Otolemur_garnettii
MGP_PahariEiJ_G0012677	Supt5	100	95.864	ENSOARG00000006174	SUPT5H	100	95.864	Ovis_aries
MGP_PahariEiJ_G0012677	Supt5	100	97.243	ENSPPAG00000040180	SUPT5H	100	97.243	Pan_paniscus
MGP_PahariEiJ_G0012677	Supt5	100	97.151	ENSPPRG00000009686	SUPT5H	100	97.151	Panthera_pardus
MGP_PahariEiJ_G0012677	Supt5	100	97.151	ENSPTIG00000011633	SUPT5H	100	97.151	Panthera_tigris_altaica
MGP_PahariEiJ_G0012677	Supt5	100	97.243	ENSPTRG00000010971	SUPT5H	100	97.243	Pan_troglodytes
MGP_PahariEiJ_G0012677	Supt5	100	97.243	ENSPANG00000007383	SUPT5H	100	97.243	Papio_anubis
MGP_PahariEiJ_G0012677	Supt5	94	88.692	ENSPKIG00000006261	supt5h	94	88.714	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0012677	Supt5	99	90.485	ENSPSIG00000014117	SUPT5H	99	90.485	Pelodiscus_sinensis
MGP_PahariEiJ_G0012677	Supt5	90	84.497	ENSPMGG00000020581	supt5h	96	84.497	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0012677	Supt5	100	99.077	ENSPEMG00000015730	Supt5	100	99.077	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0012677	Supt5	99	78.774	ENSPMAG00000006913	supt5h	94	80.214	Petromyzon_marinus
MGP_PahariEiJ_G0012677	Supt5	100	93.388	ENSPCIG00000010477	SUPT5H	100	93.939	Phascolarctos_cinereus
MGP_PahariEiJ_G0012677	Supt5	92	84.523	ENSPFOG00000011126	supt5h	94	87.196	Poecilia_formosa
MGP_PahariEiJ_G0012677	Supt5	94	87.525	ENSPLAG00000013092	supt5h	94	87.623	Poecilia_latipinna
MGP_PahariEiJ_G0012677	Supt5	87	87.779	ENSPMEG00000020479	supt5h	92	87.885	Poecilia_mexicana
MGP_PahariEiJ_G0012677	Supt5	99	83.287	ENSPREG00000006712	supt5h	94	85.108	Poecilia_reticulata
MGP_PahariEiJ_G0012677	Supt5	100	96.218	ENSPPYG00000009968	SUPT5H	100	96.218	Pongo_abelii
MGP_PahariEiJ_G0012677	Supt5	100	77.665	ENSPCAG00000010830	SUPT5H	100	80.239	Procavia_capensis
MGP_PahariEiJ_G0012677	Supt5	100	97.243	ENSPCOG00000021231	SUPT5H	100	97.243	Propithecus_coquereli
MGP_PahariEiJ_G0012677	Supt5	80	96.739	ENSPVAG00000011129	SUPT5H	80	96.739	Pteropus_vampyrus
MGP_PahariEiJ_G0012677	Supt5	94	85.419	ENSPNYG00000009203	supt5h	95	85.419	Pundamilia_nyererei
MGP_PahariEiJ_G0012677	Supt5	94	82.446	ENSPNAG00000010925	supt5h	98	81.881	Pygocentrus_nattereri
MGP_PahariEiJ_G0012677	Supt5	100	96.587	ENSRNOG00000032034	Supt5h	100	99.810	Rattus_norvegicus
MGP_PahariEiJ_G0012677	Supt5	98	96.324	ENSRBIG00000039828	SUPT5H	94	95.984	Rhinopithecus_bieti
MGP_PahariEiJ_G0012677	Supt5	100	97.243	ENSRROG00000019625	SUPT5H	100	97.243	Rhinopithecus_roxellana
MGP_PahariEiJ_G0012677	Supt5	100	97.151	ENSSBOG00000022657	SUPT5H	100	97.151	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0012677	Supt5	91	90.385	ENSSHAG00000009504	SUPT5H	100	91.055	Sarcophilus_harrisii
MGP_PahariEiJ_G0012677	Supt5	97	88.623	ENSSFOG00015005973	supt5h	99	86.452	Scleropages_formosus
MGP_PahariEiJ_G0012677	Supt5	87	87.002	ENSSMAG00000004503	supt5h	92	87.120	Scophthalmus_maximus
MGP_PahariEiJ_G0012677	Supt5	94	88.374	ENSSDUG00000014520	supt5h	99	86.296	Seriola_dumerili
MGP_PahariEiJ_G0012677	Supt5	94	88.299	ENSSLDG00000008112	supt5h	99	86.044	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0012677	Supt5	55	97.101	ENSSARG00000000997	-	64	97.101	Sorex_araneus
MGP_PahariEiJ_G0012677	Supt5	91	91.113	ENSSPUG00000011434	SUPT5H	95	90.993	Sphenodon_punctatus
MGP_PahariEiJ_G0012677	Supt5	94	87.968	ENSSPAG00000010429	supt5h	99	85.728	Stegastes_partitus
MGP_PahariEiJ_G0012677	Supt5	99	93.721	ENSSSCG00000023556	SUPT5H	99	93.721	Sus_scrofa
MGP_PahariEiJ_G0012677	Supt5	94	86.502	ENSTRUG00000002370	supt5h	100	84.337	Takifugu_rubripes
MGP_PahariEiJ_G0012677	Supt5	94	87.353	ENSTNIG00000011178	supt5h	94	87.207	Tetraodon_nigroviridis
MGP_PahariEiJ_G0012677	Supt5	62	83.161	ENSTBEG00000017617	SUPT5H	94	83.752	Tupaia_belangeri
MGP_PahariEiJ_G0012677	Supt5	100	96.232	ENSTTRG00000003573	SUPT5H	100	96.232	Tursiops_truncatus
MGP_PahariEiJ_G0012677	Supt5	100	97.151	ENSUAMG00000020014	SUPT5H	100	97.151	Ursus_americanus
MGP_PahariEiJ_G0012677	Supt5	100	94.756	ENSUMAG00000019558	SUPT5H	100	94.756	Ursus_maritimus
MGP_PahariEiJ_G0012677	Supt5	91	97.157	ENSVVUG00000006193	SUPT5H	94	97.157	Vulpes_vulpes
MGP_PahariEiJ_G0012677	Supt5	99	88.355	ENSXETG00000002888	supt5h	99	88.447	Xenopus_tropicalis
MGP_PahariEiJ_G0012677	Supt5	99	83.116	ENSXMAG00000004169	supt5h	94	85.123	Xiphophorus_maculatus