EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0012691 (Gene tree)
Gene ID: 110333721
Gene Symbol: Mrps12
Alias: Rpms12|mitoribosomal protein s12|rps12
Full Name: mitochondrial ribosomal protein S12
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 2532 bases
Position: chr1:1737124-1739655
Accession: 110333721
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0015286	Ribosom_S12_S23	PF00164.25	8.7e-26	1	1
MGP_PahariEiJ_P0015287	Ribosom_S12_S23	PF00164.25	8.7e-26	1	1
MGP_PahariEiJ_P0015288	Ribosom_S12_S23	PF00164.25	1.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0015288	-	447	-	MGP_PahariEiJ_P0015288	125 (aa)	-	-
MGP_PahariEiJ_T0015285	-	407	-	-	- (aa)	-	-
MGP_PahariEiJ_T0015287	-	749	XM_021215400	MGP_PahariEiJ_P0015287	139 (aa)	XP_021071059	UPI000A30CF8D
MGP_PahariEiJ_T0015286	-	914	-	MGP_PahariEiJ_P0015286	139 (aa)	-	UPI000A30CF8D

Gene Model

Click here to download MGP_PahariEiJ_G0012691's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0012691's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0012691	Mrps12	64	40.909	MGP_PahariEiJ_G0015839	Rps23	62	40.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0012691	Mrps12	99	84.058	ENSG00000128626	MRPS12	100	84.058	Homo_sapiens
MGP_PahariEiJ_G0012691	Mrps12	85	77.358	ENSAPOG00000005047	si:dkey-17e16.10	79	76.991	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0012691	Mrps12	100	82.014	ENSAMEG00000008722	MRPS12	100	82.014	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0012691	Mrps12	99	70.161	ENSACIG00000016095	si:dkey-17e16.10	79	78.761	Amphilophus_citrinellus
MGP_PahariEiJ_G0012691	Mrps12	85	77.358	ENSAOCG00000018530	si:dkey-17e16.10	79	76.991	Amphiprion_ocellaris
MGP_PahariEiJ_G0012691	Mrps12	85	77.358	ENSAPEG00000019785	si:dkey-17e16.10	79	76.991	Amphiprion_percula
MGP_PahariEiJ_G0012691	Mrps12	85	80.189	ENSATEG00000018924	si:dkey-17e16.10	79	79.646	Anabas_testudineus
MGP_PahariEiJ_G0012691	Mrps12	98	69.853	ENSAPLG00000011925	-	98	69.853	Anas_platyrhynchos
MGP_PahariEiJ_G0012691	Mrps12	87	69.725	ENSAPLG00000014350	-	77	69.565	Anas_platyrhynchos
MGP_PahariEiJ_G0012691	Mrps12	99	71.831	ENSACAG00000003829	MRPS12	99	71.831	Anolis_carolinensis
MGP_PahariEiJ_G0012691	Mrps12	100	85.612	ENSANAG00000033654	MRPS12	100	85.612	Aotus_nancymaae
MGP_PahariEiJ_G0012691	Mrps12	85	79.245	ENSACLG00000013979	si:dkey-17e16.10	75	78.761	Astatotilapia_calliptera
MGP_PahariEiJ_G0012691	Mrps12	85	75.472	ENSAMXG00000025945	si:dkey-17e16.10	77	75.221	Astyanax_mexicanus
MGP_PahariEiJ_G0012691	Mrps12	100	82.734	ENSBTAG00000001782	MRPS12	100	82.734	Bos_taurus
MGP_PahariEiJ_G0012691	Mrps12	79	53.333	WBGene00011391	mrps-12	68	52.830	Caenorhabditis_elegans
MGP_PahariEiJ_G0012691	Mrps12	100	84.173	ENSCJAG00000043176	MRPS12	100	84.173	Callithrix_jacchus
MGP_PahariEiJ_G0012691	Mrps12	100	82.734	ENSCAFG00000005623	MRPS12	100	82.734	Canis_familiaris
MGP_PahariEiJ_G0012691	Mrps12	100	82.734	ENSCAFG00020016784	MRPS12	100	82.734	Canis_lupus_dingo
MGP_PahariEiJ_G0012691	Mrps12	100	82.014	ENSCHIG00000013852	MRPS12	100	82.014	Capra_hircus
MGP_PahariEiJ_G0012691	Mrps12	99	84.783	ENSTSYG00000009568	MRPS12	100	84.783	Carlito_syrichta
MGP_PahariEiJ_G0012691	Mrps12	96	89.167	ENSCAPG00000009543	MRPS12	98	85.294	Cavia_aperea
MGP_PahariEiJ_G0012691	Mrps12	100	88.489	ENSCPOG00000035217	MRPS12	100	88.489	Cavia_porcellus
MGP_PahariEiJ_G0012691	Mrps12	99	84.783	ENSCCAG00000035388	MRPS12	100	84.783	Cebus_capucinus
MGP_PahariEiJ_G0012691	Mrps12	100	83.453	ENSCATG00000038438	MRPS12	100	83.453	Cercocebus_atys
MGP_PahariEiJ_G0012691	Mrps12	100	87.770	ENSCLAG00000013286	MRPS12	100	87.770	Chinchilla_lanigera
MGP_PahariEiJ_G0012691	Mrps12	100	84.173	ENSCSAG00000003929	MRPS12	100	84.173	Chlorocebus_sabaeus
MGP_PahariEiJ_G0012691	Mrps12	100	64.029	ENSCHOG00000008451	MRPS12	100	64.029	Choloepus_hoffmanni
MGP_PahariEiJ_G0012691	Mrps12	100	65.359	ENSCPBG00000018941	MRPS12	98	65.359	Chrysemys_picta_bellii
MGP_PahariEiJ_G0012691	Mrps12	64	67.500	ENSCING00000014236	-	53	59.596	Ciona_intestinalis
MGP_PahariEiJ_G0012691	Mrps12	74	60.215	ENSCSAVG00000008777	-	52	60.204	Ciona_savignyi
MGP_PahariEiJ_G0012691	Mrps12	100	83.453	ENSCANG00000003652	MRPS12	100	83.453	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0012691	Mrps12	100	92.086	ENSCGRG00001018968	Mrps12	100	92.086	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0012691	Mrps12	100	92.086	ENSCGRG00000007113	Mrps12	100	92.086	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0012691	Mrps12	85	80.189	ENSCSEG00000001174	si:dkey-17e16.10	79	79.646	Cynoglossus_semilaevis
MGP_PahariEiJ_G0012691	Mrps12	99	71.774	ENSCVAG00000003253	si:dkey-17e16.10	79	79.646	Cyprinodon_variegatus
MGP_PahariEiJ_G0012691	Mrps12	94	64.179	ENSDARG00000089836	MRPS12	92	64.179	Danio_rerio
MGP_PahariEiJ_G0012691	Mrps12	100	81.295	ENSDNOG00000003918	MRPS12	100	81.295	Dasypus_novemcinctus
MGP_PahariEiJ_G0012691	Mrps12	100	86.331	ENSDORG00000001544	Mrps12	100	86.331	Dipodomys_ordii
MGP_PahariEiJ_G0012691	Mrps12	96	56.738	FBgn0003714	tko	94	57.895	Drosophila_melanogaster
MGP_PahariEiJ_G0012691	Mrps12	100	83.453	ENSETEG00000017985	MRPS12	100	83.453	Echinops_telfairi
MGP_PahariEiJ_G0012691	Mrps12	86	79.439	ENSEBUG00000003529	si:dkey-17e16.10	65	79.825	Eptatretus_burgeri
MGP_PahariEiJ_G0012691	Mrps12	100	82.734	ENSEASG00005019736	MRPS12	100	82.734	Equus_asinus_asinus
MGP_PahariEiJ_G0012691	Mrps12	100	82.734	ENSECAG00000013794	MRPS12	100	82.734	Equus_caballus
MGP_PahariEiJ_G0012691	Mrps12	67	75.789	ENSEEUG00000013868	MRPS12	100	75.789	Erinaceus_europaeus
MGP_PahariEiJ_G0012691	Mrps12	99	70.968	ENSELUG00000014973	si:dkey-17e16.10	78	78.761	Esox_lucius
MGP_PahariEiJ_G0012691	Mrps12	100	82.734	ENSFCAG00000014573	MRPS12	100	82.734	Felis_catus
MGP_PahariEiJ_G0012691	Mrps12	82	79.412	ENSFALG00000015276	MRPS12	95	78.899	Ficedula_albicollis
MGP_PahariEiJ_G0012691	Mrps12	100	86.331	ENSFDAG00000008482	MRPS12	100	86.331	Fukomys_damarensis
MGP_PahariEiJ_G0012691	Mrps12	85	80.189	ENSFHEG00000004575	si:dkey-17e16.10	96	71.324	Fundulus_heteroclitus
MGP_PahariEiJ_G0012691	Mrps12	83	80.769	ENSGMOG00000020611	si:dkey-17e16.10	100	80.180	Gadus_morhua
MGP_PahariEiJ_G0012691	Mrps12	85	80.189	ENSGALG00000038667	MRPS12	84	80.531	Gallus_gallus
MGP_PahariEiJ_G0012691	Mrps12	85	81.132	ENSGAFG00000007521	si:dkey-17e16.10	80	80.531	Gambusia_affinis
MGP_PahariEiJ_G0012691	Mrps12	83	79.808	ENSGACG00000003011	si:dkey-17e16.10	99	80.000	Gasterosteus_aculeatus
MGP_PahariEiJ_G0012691	Mrps12	85	82.075	ENSGAGG00000009748	MRPS12	72	82.143	Gopherus_agassizii
MGP_PahariEiJ_G0012691	Mrps12	99	84.058	ENSGGOG00000002500	MRPS12	100	84.058	Gorilla_gorilla
MGP_PahariEiJ_G0012691	Mrps12	85	79.245	ENSHBUG00000014480	si:dkey-17e16.10	80	78.761	Haplochromis_burtoni
MGP_PahariEiJ_G0012691	Mrps12	100	87.050	ENSHGLG00000014942	MRPS12	99	87.050	Heterocephalus_glaber_female
MGP_PahariEiJ_G0012691	Mrps12	100	87.050	ENSHGLG00100017710	MRPS12	99	87.050	Heterocephalus_glaber_male
MGP_PahariEiJ_G0012691	Mrps12	99	69.355	ENSHCOG00000010444	si:dkey-17e16.10	76	76.316	Hippocampus_comes
MGP_PahariEiJ_G0012691	Mrps12	85	82.075	ENSIPUG00000024651	MRPS12	79	81.416	Ictalurus_punctatus
MGP_PahariEiJ_G0012691	Mrps12	100	87.770	ENSSTOG00000009006	MRPS12	100	87.770	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0012691	Mrps12	100	89.928	ENSJJAG00000017837	Mrps12	100	89.928	Jaculus_jaculus
MGP_PahariEiJ_G0012691	Mrps12	85	76.415	ENSKMAG00000007949	si:dkey-17e16.10	72	76.106	Kryptolebias_marmoratus
MGP_PahariEiJ_G0012691	Mrps12	98	73.600	ENSLBEG00000001112	si:dkey-17e16.10	89	73.600	Labrus_bergylta
MGP_PahariEiJ_G0012691	Mrps12	85	81.132	ENSLACG00000018393	MRPS12	71	81.416	Latimeria_chalumnae
MGP_PahariEiJ_G0012691	Mrps12	84	83.962	ENSLOCG00000000535	si:dkey-17e16.10	80	82.051	Lepisosteus_oculatus
MGP_PahariEiJ_G0012691	Mrps12	99	80.292	ENSLAFG00000022140	MRPS12	99	80.292	Loxodonta_africana
MGP_PahariEiJ_G0012691	Mrps12	100	84.173	ENSMFAG00000044563	MRPS12	100	84.173	Macaca_fascicularis
MGP_PahariEiJ_G0012691	Mrps12	100	83.453	ENSMNEG00000040379	MRPS12	100	83.453	Macaca_nemestrina
MGP_PahariEiJ_G0012691	Mrps12	100	83.453	ENSMLEG00000036963	MRPS12	100	83.453	Mandrillus_leucophaeus
MGP_PahariEiJ_G0012691	Mrps12	99	69.355	ENSMAMG00000017962	si:dkey-17e16.10	81	77.876	Mastacembelus_armatus
MGP_PahariEiJ_G0012691	Mrps12	85	79.245	ENSMZEG00005017336	si:dkey-17e16.10	79	78.761	Maylandia_zebra
MGP_PahariEiJ_G0012691	Mrps12	99	69.014	ENSMGAG00000005414	MRPS12	99	67.606	Meleagris_gallopavo
MGP_PahariEiJ_G0012691	Mrps12	74	93.204	ENSMAUG00000019146	Mrps12	100	93.204	Mesocricetus_auratus
MGP_PahariEiJ_G0012691	Mrps12	100	84.892	ENSMICG00000045111	MRPS12	100	84.892	Microcebus_murinus
MGP_PahariEiJ_G0012691	Mrps12	99	93.478	ENSMOCG00000012666	Mrps12	100	93.478	Microtus_ochrogaster
MGP_PahariEiJ_G0012691	Mrps12	83	81.731	ENSMMOG00000010803	si:dkey-17e16.10	77	81.982	Mola_mola
MGP_PahariEiJ_G0012691	Mrps12	100	68.750	ENSMODG00000013431	MRPS12	100	68.750	Monodelphis_domestica
MGP_PahariEiJ_G0012691	Mrps12	99	70.968	ENSMALG00000004190	si:dkey-17e16.10	79	78.761	Monopterus_albus
MGP_PahariEiJ_G0012691	Mrps12	100	96.000	MGP_CAROLIEiJ_G0029457	Mrps12	100	96.000	Mus_caroli
MGP_PahariEiJ_G0012691	Mrps12	100	96.000	ENSMUSG00000045948	Mrps12	100	96.000	Mus_musculus
MGP_PahariEiJ_G0012691	Mrps12	100	96.000	MGP_SPRETEiJ_G0030553	Mrps12	100	96.000	Mus_spretus
MGP_PahariEiJ_G0012691	Mrps12	100	82.014	ENSMPUG00000017750	MRPS12	100	82.014	Mustela_putorius_furo
MGP_PahariEiJ_G0012691	Mrps12	100	84.892	ENSMLUG00000006076	MRPS12	100	84.892	Myotis_lucifugus
MGP_PahariEiJ_G0012691	Mrps12	100	88.489	ENSNGAG00000022099	Mrps12	100	88.489	Nannospalax_galili
MGP_PahariEiJ_G0012691	Mrps12	85	79.245	ENSNBRG00000007244	si:dkey-17e16.10	79	78.761	Neolamprologus_brichardi
MGP_PahariEiJ_G0012691	Mrps12	83	77.885	ENSMEUG00000005688	MRPS12	99	79.279	Notamacropus_eugenii
MGP_PahariEiJ_G0012691	Mrps12	100	87.050	ENSODEG00000016161	MRPS12	100	87.050	Octodon_degus
MGP_PahariEiJ_G0012691	Mrps12	84	80.000	ENSONIG00000002022	si:dkey-17e16.10	78	79.464	Oreochromis_niloticus
MGP_PahariEiJ_G0012691	Mrps12	99	87.681	ENSOCUG00000000689	MRPS12	100	87.681	Oryctolagus_cuniculus
MGP_PahariEiJ_G0012691	Mrps12	97	72.727	ENSORLG00000007040	si:dkey-17e16.10	96	73.134	Oryzias_latipes
MGP_PahariEiJ_G0012691	Mrps12	97	72.727	ENSORLG00020011268	MRPS12	96	73.134	Oryzias_latipes_hni
MGP_PahariEiJ_G0012691	Mrps12	97	72.727	ENSORLG00015009378	MRPS12	96	73.134	Oryzias_latipes_hsok
MGP_PahariEiJ_G0012691	Mrps12	98	72.131	ENSOMEG00000001427	si:dkey-17e16.10	96	73.134	Oryzias_melastigma
MGP_PahariEiJ_G0012691	Mrps12	100	79.856	ENSOGAG00000025634	-	100	79.856	Otolemur_garnettii
MGP_PahariEiJ_G0012691	Mrps12	100	86.331	ENSOGAG00000008295	-	100	86.331	Otolemur_garnettii
MGP_PahariEiJ_G0012691	Mrps12	100	82.014	ENSOARG00000005927	MRPS12	100	82.014	Ovis_aries
MGP_PahariEiJ_G0012691	Mrps12	99	84.058	ENSPPAG00000041637	MRPS12	100	84.058	Pan_paniscus
MGP_PahariEiJ_G0012691	Mrps12	100	83.453	ENSPPRG00000011742	MRPS12	100	83.453	Panthera_pardus
MGP_PahariEiJ_G0012691	Mrps12	100	71.942	ENSPTIG00000008427	MRPS12	100	74.820	Panthera_tigris_altaica
MGP_PahariEiJ_G0012691	Mrps12	99	84.058	ENSPTRG00000010948	MRPS12	100	84.058	Pan_troglodytes
MGP_PahariEiJ_G0012691	Mrps12	100	84.173	ENSPANG00000021673	MRPS12	100	84.173	Papio_anubis
MGP_PahariEiJ_G0012691	Mrps12	85	81.132	ENSPKIG00000006716	si:dkey-17e16.10	79	80.531	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0012691	Mrps12	90	79.130	ENSPSIG00000014383	MRPS12	100	67.974	Pelodiscus_sinensis
MGP_PahariEiJ_G0012691	Mrps12	98	70.492	ENSPMGG00000009631	si:dkey-17e16.10	85	74.380	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0012691	Mrps12	100	94.245	ENSPEMG00000016700	Mrps12	100	94.245	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0012691	Mrps12	81	72.277	ENSPMAG00000008051	si:dkey-17e16.10	70	73.148	Petromyzon_marinus
MGP_PahariEiJ_G0012691	Mrps12	100	71.631	ENSPCIG00000010531	-	100	71.631	Phascolarctos_cinereus
MGP_PahariEiJ_G0012691	Mrps12	85	78.302	ENSPFOG00000018863	si:dkey-17e16.10	79	77.876	Poecilia_formosa
MGP_PahariEiJ_G0012691	Mrps12	85	78.302	ENSPLAG00000008933	si:dkey-17e16.10	79	77.876	Poecilia_latipinna
MGP_PahariEiJ_G0012691	Mrps12	100	69.600	ENSPMEG00000005155	si:dkey-17e16.10	75	78.571	Poecilia_mexicana
MGP_PahariEiJ_G0012691	Mrps12	85	78.302	ENSPREG00000014123	si:dkey-17e16.10	76	77.876	Poecilia_reticulata
MGP_PahariEiJ_G0012691	Mrps12	99	84.058	ENSPPYG00000009950	MRPS12	100	84.058	Pongo_abelii
MGP_PahariEiJ_G0012691	Mrps12	99	84.672	ENSPCAG00000010853	MRPS12	99	84.672	Procavia_capensis
MGP_PahariEiJ_G0012691	Mrps12	100	86.331	ENSPCOG00000020370	MRPS12	100	86.331	Propithecus_coquereli
MGP_PahariEiJ_G0012691	Mrps12	100	81.295	ENSPVAG00000011605	MRPS12	100	81.295	Pteropus_vampyrus
MGP_PahariEiJ_G0012691	Mrps12	85	79.245	ENSPNYG00000015506	si:dkey-17e16.10	75	78.761	Pundamilia_nyererei
MGP_PahariEiJ_G0012691	Mrps12	90	79.464	ENSPNAG00000016315	si:dkey-17e16.10	80	78.992	Pygocentrus_nattereri
MGP_PahariEiJ_G0012691	Mrps12	100	95.683	ENSRNOG00000019949	Mrps12	100	95.683	Rattus_norvegicus
MGP_PahariEiJ_G0012691	Mrps12	100	83.453	ENSRBIG00000029741	MRPS12	100	83.453	Rhinopithecus_bieti
MGP_PahariEiJ_G0012691	Mrps12	100	82.734	ENSRROG00000030787	MRPS12	100	82.734	Rhinopithecus_roxellana
MGP_PahariEiJ_G0012691	Mrps12	100	85.612	ENSSBOG00000025707	MRPS12	100	85.612	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0012691	Mrps12	88	77.273	ENSSFOG00015018102	mrps12	82	76.923	Scleropages_formosus
MGP_PahariEiJ_G0012691	Mrps12	99	70.161	ENSSMAG00000004249	si:dkey-17e16.10	79	77.876	Scophthalmus_maximus
MGP_PahariEiJ_G0012691	Mrps12	85	77.358	ENSSDUG00000020424	si:dkey-17e16.10	78	76.991	Seriola_dumerili
MGP_PahariEiJ_G0012691	Mrps12	85	77.358	ENSSLDG00000016320	si:dkey-17e16.10	78	76.991	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0012691	Mrps12	100	79.137	ENSSARG00000006985	MRPS12	100	79.137	Sorex_araneus
MGP_PahariEiJ_G0012691	Mrps12	85	83.019	ENSSPUG00000004675	MRPS12	73	83.036	Sphenodon_punctatus
MGP_PahariEiJ_G0012691	Mrps12	85	75.472	ENSSPAG00000012951	si:dkey-17e16.10	79	75.221	Stegastes_partitus
MGP_PahariEiJ_G0012691	Mrps12	100	84.173	ENSSSCG00000031860	MRPS12	100	84.173	Sus_scrofa
MGP_PahariEiJ_G0012691	Mrps12	82	76.699	ENSTGUG00000016491	MRPS12	100	76.364	Taeniopygia_guttata
MGP_PahariEiJ_G0012691	Mrps12	84	80.952	ENSTRUG00000017342	si:dkey-17e16.10	79	80.357	Takifugu_rubripes
MGP_PahariEiJ_G0012691	Mrps12	96	70.896	ENSTNIG00000004898	si:dkey-17e16.10	96	70.896	Tetraodon_nigroviridis
MGP_PahariEiJ_G0012691	Mrps12	100	84.892	ENSTBEG00000001288	MRPS12	100	84.892	Tupaia_belangeri
MGP_PahariEiJ_G0012691	Mrps12	100	82.014	ENSTTRG00000011794	MRPS12	100	82.014	Tursiops_truncatus
MGP_PahariEiJ_G0012691	Mrps12	100	79.856	ENSUAMG00000011626	MRPS12	100	79.856	Ursus_americanus
MGP_PahariEiJ_G0012691	Mrps12	100	80.576	ENSUMAG00000019235	MRPS12	100	80.576	Ursus_maritimus
MGP_PahariEiJ_G0012691	Mrps12	100	82.734	ENSVVUG00000006433	MRPS12	71	82.734	Vulpes_vulpes
MGP_PahariEiJ_G0012691	Mrps12	86	78.505	ENSXETG00000005326	mrps12	77	78.070	Xenopus_tropicalis
MGP_PahariEiJ_G0012691	Mrps12	85	81.132	ENSXCOG00000020766	si:dkey-17e16.10	76	80.531	Xiphophorus_couchianus
MGP_PahariEiJ_G0012691	Mrps12	85	81.132	ENSXMAG00000027119	si:dkey-17e16.10	80	80.531	Xiphophorus_maculatus