EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0012816 (Gene tree)
Gene ID: 110323009
Gene Symbol: Gpatch1
Alias: 1300003A17Rik|Gpatc1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 42614 bases
Position: chr1:8235765-8278378
Accession: 110323009
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0015876	DUF1604	PF07713.13	6.8e-36	1	1
MGP_PahariEiJ_P0015876	G-patch	PF01585.23	9.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0015876	-	3074	XM_021200028	MGP_PahariEiJ_P0015876	932 (aa)	XP_021055687	UPI000A304674
MGP_PahariEiJ_T0015877	-	2947	-	MGP_PahariEiJ_P0015877	883 (aa)	-	-
MGP_PahariEiJ_T0015880	-	692	-	-	- (aa)	-	-
MGP_PahariEiJ_T0015878	-	2590	-	MGP_PahariEiJ_P0015878	98 (aa)	-	-
MGP_PahariEiJ_T0015879	-	627	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0012816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0012816's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0012816	Gpatch1	100	95.918	ENSG00000076650	GPATCH1	100	83.850	Homo_sapiens
MGP_PahariEiJ_G0012816	Gpatch1	98	78.125	ENSAPOG00000009586	-	80	78.125	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0012816	Gpatch1	100	96.939	ENSAMEG00000015575	GPATCH1	100	84.368	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0012816	Gpatch1	98	77.083	ENSACIG00000001397	-	74	77.083	Amphilophus_citrinellus
MGP_PahariEiJ_G0012816	Gpatch1	78	75.000	ENSAOCG00000009040	-	80	75.000	Amphiprion_ocellaris
MGP_PahariEiJ_G0012816	Gpatch1	98	77.083	ENSAOCG00000006668	gpatch1	75	71.271	Amphiprion_ocellaris
MGP_PahariEiJ_G0012816	Gpatch1	98	78.125	ENSAPEG00000000026	gpatch1	94	50.891	Amphiprion_percula
MGP_PahariEiJ_G0012816	Gpatch1	98	78.125	ENSATEG00000014494	gpatch1	94	50.823	Anabas_testudineus
MGP_PahariEiJ_G0012816	Gpatch1	79	79.221	ENSAPLG00000007584	GPATCH1	99	59.933	Anas_platyrhynchos
MGP_PahariEiJ_G0012816	Gpatch1	100	97.959	ENSANAG00000027002	GPATCH1	100	83.957	Aotus_nancymaae
MGP_PahariEiJ_G0012816	Gpatch1	98	78.125	ENSACLG00000024740	gpatch1	79	54.592	Astatotilapia_calliptera
MGP_PahariEiJ_G0012816	Gpatch1	98	75.000	ENSAMXG00000020177	gpatch1	98	53.491	Astyanax_mexicanus
MGP_PahariEiJ_G0012816	Gpatch1	100	96.939	ENSBTAG00000000721	GPATCH1	100	82.013	Bos_taurus
MGP_PahariEiJ_G0012816	Gpatch1	71	57.143	WBGene00011109	R07E5.1	68	30.317	Caenorhabditis_elegans
MGP_PahariEiJ_G0012816	Gpatch1	100	97.959	ENSCJAG00000000684	GPATCH1	100	83.209	Callithrix_jacchus
MGP_PahariEiJ_G0012816	Gpatch1	100	95.918	ENSCAFG00000007457	GPATCH1	84	84.278	Canis_familiaris
MGP_PahariEiJ_G0012816	Gpatch1	100	95.918	ENSCAFG00020019731	GPATCH1	93	84.411	Canis_lupus_dingo
MGP_PahariEiJ_G0012816	Gpatch1	100	96.939	ENSCHIG00000019626	GPATCH1	100	82.548	Capra_hircus
MGP_PahariEiJ_G0012816	Gpatch1	97	77.888	ENSCAPG00000008827	GPATCH1	100	77.754	Cavia_aperea
MGP_PahariEiJ_G0012816	Gpatch1	100	91.837	ENSCPOG00000024477	GPATCH1	100	80.149	Cavia_porcellus
MGP_PahariEiJ_G0012816	Gpatch1	100	95.918	ENSCCAG00000024676	GPATCH1	100	83.102	Cebus_capucinus
MGP_PahariEiJ_G0012816	Gpatch1	100	96.939	ENSCATG00000043637	GPATCH1	100	83.333	Cercocebus_atys
MGP_PahariEiJ_G0012816	Gpatch1	96	79.530	ENSCLAG00000003395	-	100	80.201	Chinchilla_lanigera
MGP_PahariEiJ_G0012816	Gpatch1	100	96.939	ENSCSAG00000004743	GPATCH1	100	81.944	Chlorocebus_sabaeus
MGP_PahariEiJ_G0012816	Gpatch1	92	72.055	ENSCHOG00000012865	GPATCH1	100	72.055	Choloepus_hoffmanni
MGP_PahariEiJ_G0012816	Gpatch1	70	89.855	ENSCPBG00000000666	GPATCH1	92	68.076	Chrysemys_picta_bellii
MGP_PahariEiJ_G0012816	Gpatch1	96	56.383	ENSCING00000012518	-	84	34.501	Ciona_intestinalis
MGP_PahariEiJ_G0012816	Gpatch1	90	78.870	ENSCANG00000012540	GPATCH1	100	78.870	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0012816	Gpatch1	97	87.706	ENSCGRG00001016736	Gpatch1	100	88.364	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0012816	Gpatch1	94	72.738	ENSCGRG00000005069	Gpatch1	92	72.454	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0012816	Gpatch1	98	69.792	ENSCSEG00000019456	-	84	62.385	Cynoglossus_semilaevis
MGP_PahariEiJ_G0012816	Gpatch1	98	76.042	ENSDARG00000033418	gpatch1	93	51.023	Danio_rerio
MGP_PahariEiJ_G0012816	Gpatch1	100	92.857	ENSDNOG00000005291	GPATCH1	96	81.293	Dasypus_novemcinctus
MGP_PahariEiJ_G0012816	Gpatch1	100	94.898	ENSDORG00000012546	Gpatch1	96	78.613	Dipodomys_ordii
MGP_PahariEiJ_G0012816	Gpatch1	94	58.511	FBgn0036386	CG8833	67	33.866	Drosophila_melanogaster
MGP_PahariEiJ_G0012816	Gpatch1	100	90.816	ENSETEG00000003626	GPATCH1	94	73.818	Echinops_telfairi
MGP_PahariEiJ_G0012816	Gpatch1	96	62.766	ENSEBUG00000011286	gpatch1	94	37.017	Eptatretus_burgeri
MGP_PahariEiJ_G0012816	Gpatch1	100	94.898	ENSEASG00005021162	GPATCH1	100	79.229	Equus_asinus_asinus
MGP_PahariEiJ_G0012816	Gpatch1	100	94.898	ENSECAG00000022743	GPATCH1	90	83.699	Equus_caballus
MGP_PahariEiJ_G0012816	Gpatch1	100	90.816	ENSEEUG00000012925	GPATCH1	77	77.387	Erinaceus_europaeus
MGP_PahariEiJ_G0012816	Gpatch1	98	72.917	ENSELUG00000018195	gpatch1	92	49.890	Esox_lucius
MGP_PahariEiJ_G0012816	Gpatch1	100	95.918	ENSFCAG00000014917	GPATCH1	100	82.655	Felis_catus
MGP_PahariEiJ_G0012816	Gpatch1	99	76.531	ENSFALG00000007821	GPATCH1	99	62.355	Ficedula_albicollis
MGP_PahariEiJ_G0012816	Gpatch1	96	80.756	ENSFDAG00000003871	GPATCH1	100	81.090	Fukomys_damarensis
MGP_PahariEiJ_G0012816	Gpatch1	98	72.917	ENSFHEG00000007459	-	84	73.196	Fundulus_heteroclitus
MGP_PahariEiJ_G0012816	Gpatch1	78	75.000	ENSGMOG00000003830	gpatch1	99	52.204	Gadus_morhua
MGP_PahariEiJ_G0012816	Gpatch1	100	75.758	ENSGALG00000004839	GPATCH1	96	62.288	Gallus_gallus
MGP_PahariEiJ_G0012816	Gpatch1	97	74.737	ENSGAFG00000006163	-	85	74.737	Gambusia_affinis
MGP_PahariEiJ_G0012816	Gpatch1	98	73.958	ENSGACG00000017544	gpatch1	96	49.601	Gasterosteus_aculeatus
MGP_PahariEiJ_G0012816	Gpatch1	100	83.000	ENSGAGG00000010067	GPATCH1	100	64.179	Gopherus_agassizii
MGP_PahariEiJ_G0012816	Gpatch1	98	83.134	ENSGGOG00000010862	GPATCH1	100	83.626	Gorilla_gorilla
MGP_PahariEiJ_G0012816	Gpatch1	98	79.167	ENSHBUG00000023462	gpatch1	90	52.283	Haplochromis_burtoni
MGP_PahariEiJ_G0012816	Gpatch1	100	93.878	ENSHGLG00000009334	GPATCH1	100	81.410	Heterocephalus_glaber_female
MGP_PahariEiJ_G0012816	Gpatch1	100	93.878	ENSHGLG00100018074	GPATCH1	100	81.517	Heterocephalus_glaber_male
MGP_PahariEiJ_G0012816	Gpatch1	90	72.727	ENSHCOG00000006876	-	70	72.727	Hippocampus_comes
MGP_PahariEiJ_G0012816	Gpatch1	98	73.958	ENSIPUG00000014977	gpatch1	93	50.598	Ictalurus_punctatus
MGP_PahariEiJ_G0012816	Gpatch1	100	91.837	ENSSTOG00000003720	GPATCH1	100	83.209	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0012816	Gpatch1	100	94.898	ENSJJAG00000023765	Gpatch1	100	84.227	Jaculus_jaculus
MGP_PahariEiJ_G0012816	Gpatch1	98	76.042	ENSKMAG00000017950	gpatch1	93	50.664	Kryptolebias_marmoratus
MGP_PahariEiJ_G0012816	Gpatch1	69	73.529	ENSLBEG00000028648	-	78	67.105	Labrus_bergylta
MGP_PahariEiJ_G0012816	Gpatch1	98	75.000	ENSLBEG00000026527	gpatch1	92	50.054	Labrus_bergylta
MGP_PahariEiJ_G0012816	Gpatch1	71	82.857	ENSLACG00000008130	GPATCH1	99	57.174	Latimeria_chalumnae
MGP_PahariEiJ_G0012816	Gpatch1	100	74.490	ENSLOCG00000001800	gpatch1	92	54.362	Lepisosteus_oculatus
MGP_PahariEiJ_G0012816	Gpatch1	100	97.959	ENSLAFG00000013589	GPATCH1	100	82.762	Loxodonta_africana
MGP_PahariEiJ_G0012816	Gpatch1	100	96.939	ENSMFAG00000034418	GPATCH1	96	84.452	Macaca_fascicularis
MGP_PahariEiJ_G0012816	Gpatch1	100	95.918	ENSMMUG00000011790	GPATCH1	100	83.868	Macaca_mulatta
MGP_PahariEiJ_G0012816	Gpatch1	100	92.857	ENSMNEG00000045084	GPATCH1	100	83.636	Macaca_nemestrina
MGP_PahariEiJ_G0012816	Gpatch1	100	73.476	ENSMLEG00000043840	GPATCH1	100	73.476	Mandrillus_leucophaeus
MGP_PahariEiJ_G0012816	Gpatch1	98	78.125	ENSMZEG00005001926	gpatch1	80	54.592	Maylandia_zebra
MGP_PahariEiJ_G0012816	Gpatch1	92	77.778	ENSMGAG00000005775	GPATCH1	92	63.036	Meleagris_gallopavo
MGP_PahariEiJ_G0012816	Gpatch1	95	76.824	ENSMICG00000004829	GPATCH1	96	76.261	Microcebus_murinus
MGP_PahariEiJ_G0012816	Gpatch1	100	94.898	ENSMOCG00000000174	Gpatch1	100	87.957	Microtus_ochrogaster
MGP_PahariEiJ_G0012816	Gpatch1	98	73.958	ENSMMOG00000002140	gpatch1	87	50.440	Mola_mola
MGP_PahariEiJ_G0012816	Gpatch1	100	86.735	ENSMODG00000012226	GPATCH1	100	70.296	Monodelphis_domestica
MGP_PahariEiJ_G0012816	Gpatch1	98	75.000	ENSMALG00000014386	gpatch1	94	50.442	Monopterus_albus
MGP_PahariEiJ_G0012816	Gpatch1	100	98.980	ENSMUSG00000063808	Gpatch1	100	98.980	Mus_musculus
MGP_PahariEiJ_G0012816	Gpatch1	100	100.000	MGP_SPRETEiJ_G0030681	Gpatch1	100	100.000	Mus_spretus
MGP_PahariEiJ_G0012816	Gpatch1	100	95.918	ENSMPUG00000007658	GPATCH1	100	83.833	Mustela_putorius_furo
MGP_PahariEiJ_G0012816	Gpatch1	100	93.878	ENSMLUG00000012161	GPATCH1	100	82.422	Myotis_lucifugus
MGP_PahariEiJ_G0012816	Gpatch1	100	96.939	ENSNGAG00000012455	Gpatch1	100	84.673	Nannospalax_galili
MGP_PahariEiJ_G0012816	Gpatch1	100	77.551	ENSNBRG00000003140	-	88	70.270	Neolamprologus_brichardi
MGP_PahariEiJ_G0012816	Gpatch1	100	95.918	ENSNLEG00000007659	GPATCH1	100	83.850	Nomascus_leucogenys
MGP_PahariEiJ_G0012816	Gpatch1	82	65.706	ENSMEUG00000015174	GPATCH1	78	65.706	Notamacropus_eugenii
MGP_PahariEiJ_G0012816	Gpatch1	100	91.837	ENSODEG00000007103	GPATCH1	99	80.214	Octodon_degus
MGP_PahariEiJ_G0012816	Gpatch1	100	77.551	ENSONIG00000003302	gpatch1	94	52.477	Oreochromis_niloticus
MGP_PahariEiJ_G0012816	Gpatch1	96	89.362	ENSOANG00000012732	GPATCH1	99	70.601	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0012816	Gpatch1	100	94.898	ENSOCUG00000015905	GPATCH1	100	85.332	Oryctolagus_cuniculus
MGP_PahariEiJ_G0012816	Gpatch1	98	72.917	ENSORLG00000018706	gpatch1	92	50.281	Oryzias_latipes
MGP_PahariEiJ_G0012816	Gpatch1	98	72.917	ENSORLG00020014884	-	93	58.885	Oryzias_latipes_hni
MGP_PahariEiJ_G0012816	Gpatch1	98	72.917	ENSORLG00015012287	-	96	58.885	Oryzias_latipes_hsok
MGP_PahariEiJ_G0012816	Gpatch1	98	72.917	ENSOMEG00000022688	gpatch1	95	48.948	Oryzias_melastigma
MGP_PahariEiJ_G0012816	Gpatch1	100	94.898	ENSOGAG00000004016	GPATCH1	96	86.561	Otolemur_garnettii
MGP_PahariEiJ_G0012816	Gpatch1	93	95.604	ENSOARG00000004365	GPATCH1	99	82.093	Ovis_aries
MGP_PahariEiJ_G0012816	Gpatch1	100	94.949	ENSPPAG00000020990	GPATCH1	100	83.316	Pan_paniscus
MGP_PahariEiJ_G0012816	Gpatch1	100	95.918	ENSPPRG00000017245	GPATCH1	100	82.869	Panthera_pardus
MGP_PahariEiJ_G0012816	Gpatch1	100	95.918	ENSPTIG00000019649	GPATCH1	100	83.619	Panthera_tigris_altaica
MGP_PahariEiJ_G0012816	Gpatch1	100	95.918	ENSPTRG00000010803	GPATCH1	100	83.316	Pan_troglodytes
MGP_PahariEiJ_G0012816	Gpatch1	100	96.939	ENSPANG00000012374	GPATCH1	97	84.180	Papio_anubis
MGP_PahariEiJ_G0012816	Gpatch1	96	73.404	ENSPKIG00000020745	gpatch1	77	56.505	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0012816	Gpatch1	100	82.653	ENSPSIG00000013433	GPATCH1	100	62.803	Pelodiscus_sinensis
MGP_PahariEiJ_G0012816	Gpatch1	100	71.429	ENSPMGG00000014320	-	74	71.429	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0012816	Gpatch1	100	97.959	ENSPEMG00000000636	Gpatch1	100	89.282	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0012816	Gpatch1	100	87.755	ENSPCIG00000021003	GPATCH1	98	70.529	Phascolarctos_cinereus
MGP_PahariEiJ_G0012816	Gpatch1	98	77.083	ENSPLAG00000017953	-	99	77.083	Poecilia_latipinna
MGP_PahariEiJ_G0012816	Gpatch1	100	76.531	ENSPMEG00000017559	-	100	76.531	Poecilia_mexicana
MGP_PahariEiJ_G0012816	Gpatch1	98	76.042	ENSPREG00000008264	gpatch1	84	49.014	Poecilia_reticulata
MGP_PahariEiJ_G0012816	Gpatch1	100	95.918	ENSPPYG00000009824	GPATCH1	100	81.070	Pongo_abelii
MGP_PahariEiJ_G0012816	Gpatch1	87	74.292	ENSPCAG00000005931	GPATCH1	93	74.603	Procavia_capensis
MGP_PahariEiJ_G0012816	Gpatch1	100	96.939	ENSPCOG00000009674	GPATCH1	98	80.324	Propithecus_coquereli
MGP_PahariEiJ_G0012816	Gpatch1	100	95.918	ENSPVAG00000017767	GPATCH1	91	83.956	Pteropus_vampyrus
MGP_PahariEiJ_G0012816	Gpatch1	100	77.551	ENSPNYG00000018189	gpatch1	89	55.270	Pundamilia_nyererei
MGP_PahariEiJ_G0012816	Gpatch1	98	75.000	ENSPNAG00000013187	gpatch1	93	51.935	Pygocentrus_nattereri
MGP_PahariEiJ_G0012816	Gpatch1	100	98.980	ENSRNOG00000011584	Gpatch1	100	94.742	Rattus_norvegicus
MGP_PahariEiJ_G0012816	Gpatch1	100	76.496	ENSRBIG00000034723	GPATCH1	100	74.600	Rhinopithecus_bieti
MGP_PahariEiJ_G0012816	Gpatch1	100	95.918	ENSRROG00000024428	GPATCH1	100	84.064	Rhinopithecus_roxellana
MGP_PahariEiJ_G0012816	Gpatch1	100	95.918	ENSSBOG00000034650	GPATCH1	100	83.743	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0012816	Gpatch1	100	89.796	ENSSHAG00000016016	GPATCH1	99	70.975	Sarcophilus_harrisii
MGP_PahariEiJ_G0012816	Gpatch1	98	69.792	ENSSFOG00015011535	gpatch1	92	53.177	Scleropages_formosus
MGP_PahariEiJ_G0012816	Gpatch1	98	72.917	ENSSMAG00000002883	gpatch1	96	46.779	Scophthalmus_maximus
MGP_PahariEiJ_G0012816	Gpatch1	98	77.083	ENSSDUG00000007444	gpatch1	80	52.298	Seriola_dumerili
MGP_PahariEiJ_G0012816	Gpatch1	98	77.083	ENSSLDG00000002856	gpatch1	89	51.737	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0012816	Gpatch1	100	91.837	ENSSARG00000004108	GPATCH1	72	81.751	Sorex_araneus
MGP_PahariEiJ_G0012816	Gpatch1	92	81.111	ENSSPUG00000013348	-	94	76.113	Sphenodon_punctatus
MGP_PahariEiJ_G0012816	Gpatch1	98	79.167	ENSSPAG00000022432	-	86	77.451	Stegastes_partitus
MGP_PahariEiJ_G0012816	Gpatch1	100	95.918	ENSSSCG00000002865	GPATCH1	96	84.971	Sus_scrofa
MGP_PahariEiJ_G0012816	Gpatch1	100	75.758	ENSTGUG00000009401	GPATCH1	100	62.995	Taeniopygia_guttata
MGP_PahariEiJ_G0012816	Gpatch1	98	73.958	ENSTRUG00000005785	-	93	49.266	Takifugu_rubripes
MGP_PahariEiJ_G0012816	Gpatch1	98	73.958	ENSTRUG00000025081	gpatch1	93	49.266	Takifugu_rubripes
MGP_PahariEiJ_G0012816	Gpatch1	98	74.490	ENSTNIG00000002554	gpatch1	97	53.351	Tetraodon_nigroviridis
MGP_PahariEiJ_G0012816	Gpatch1	74	98.630	ENSTBEG00000007750	-	82	74.265	Tupaia_belangeri
MGP_PahariEiJ_G0012816	Gpatch1	100	91.837	ENSTTRG00000012221	GPATCH1	100	76.709	Tursiops_truncatus
MGP_PahariEiJ_G0012816	Gpatch1	100	96.939	ENSUAMG00000015638	-	74	96.939	Ursus_americanus
MGP_PahariEiJ_G0012816	Gpatch1	100	96.939	ENSUMAG00000014645	GPATCH1	100	82.619	Ursus_maritimus
MGP_PahariEiJ_G0012816	Gpatch1	100	94.898	ENSVPAG00000010313	GPATCH1	87	94.565	Vicugna_pacos
MGP_PahariEiJ_G0012816	Gpatch1	100	94.898	ENSVVUG00000016572	GPATCH1	93	84.411	Vulpes_vulpes
MGP_PahariEiJ_G0012816	Gpatch1	99	50.678	ENSXETG00000018276	gpatch1	100	51.569	Xenopus_tropicalis
MGP_PahariEiJ_G0012816	Gpatch1	97	75.789	ENSXCOG00000009851	-	69	75.789	Xiphophorus_couchianus
MGP_PahariEiJ_G0012816	Gpatch1	97	75.789	ENSXMAG00000018182	-	71	75.789	Xiphophorus_maculatus