EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0012821 (Gene tree)
Gene ID: 110335385
Gene Symbol: -
Alias: -
Full Name: tudor domain containing 12
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 69029 bases
Position: chr1:8433842-8502870
Accession: 110335385
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0015905	TUDOR	PF00567.24	4.3e-34	1	2
MGP_PahariEiJ_P0015905	TUDOR	PF00567.24	4.3e-34	2	2
MGP_PahariEiJ_P0015904	TUDOR	PF00567.24	5.2e-34	1	2
MGP_PahariEiJ_P0015904	TUDOR	PF00567.24	5.2e-34	2	2
MGP_PahariEiJ_P0015907	TUDOR	PF00567.24	1.5e-23	1	1
MGP_PahariEiJ_P0015909	TUDOR	PF00567.24	1.3e-12	1	1
MGP_PahariEiJ_P0015906	TUDOR	PF00567.24	2.9e-12	1	1
MGP_PahariEiJ_P0015905	DEAD	PF00270.29	1.6e-06	1	1
MGP_PahariEiJ_P0015904	DEAD	PF00270.29	2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0015908	-	543	-	MGP_PahariEiJ_P0015908	127 (aa)	-	-
MGP_PahariEiJ_T0015909	-	775	-	MGP_PahariEiJ_P0015909	204 (aa)	-	-
MGP_PahariEiJ_T0015906	-	1418	-	MGP_PahariEiJ_P0015906	354 (aa)	-	-
MGP_PahariEiJ_T0015907	-	1627	-	MGP_PahariEiJ_P0015907	407 (aa)	-	-
MGP_PahariEiJ_T0015904	-	3651	XM_021217514	MGP_PahariEiJ_P0015904	1216 (aa)	XP_021073173	UPI000A312764
MGP_PahariEiJ_T0015905	-	3341	-	MGP_PahariEiJ_P0015905	1113 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0012821's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0012821's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0012821	-	83	42.917	ENSAPOG00000006421	tdrd12	90	42.917	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0012821	-	73	81.605	ENSAMEG00000015440	-	99	81.605	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0012821	-	88	45.498	ENSACIG00000021652	tdrd12	98	45.498	Amphilophus_citrinellus
MGP_PahariEiJ_G0012821	-	88	42.522	ENSAOCG00000016463	tdrd12	85	43.200	Amphiprion_ocellaris
MGP_PahariEiJ_G0012821	-	89	44.412	ENSAPEG00000015105	tdrd12	87	48.800	Amphiprion_percula
MGP_PahariEiJ_G0012821	-	84	42.974	ENSATEG00000011608	tdrd12	93	42.974	Anabas_testudineus
MGP_PahariEiJ_G0012821	-	94	58.031	ENSAPLG00000011417	-	99	52.941	Anas_platyrhynchos
MGP_PahariEiJ_G0012821	-	69	53.530	ENSACAG00000029615	-	87	50.867	Anolis_carolinensis
MGP_PahariEiJ_G0012821	-	100	74.979	ENSANAG00000023166	-	99	74.979	Aotus_nancymaae
MGP_PahariEiJ_G0012821	-	91	47.178	ENSAMXG00000013811	tdrd12	99	47.178	Astyanax_mexicanus
MGP_PahariEiJ_G0012821	-	90	81.522	ENSBTAG00000019266	TDRD12	99	74.242	Bos_taurus
MGP_PahariEiJ_G0012821	-	100	75.514	ENSCJAG00000000763	-	99	75.514	Callithrix_jacchus
MGP_PahariEiJ_G0012821	-	97	82.741	ENSCAFG00000007505	TDRD12	98	76.578	Canis_familiaris
MGP_PahariEiJ_G0012821	-	97	82.741	ENSCAFG00020019790	-	94	78.994	Canis_lupus_dingo
MGP_PahariEiJ_G0012821	-	99	75.473	ENSTSYG00000012034	-	99	75.473	Carlito_syrichta
MGP_PahariEiJ_G0012821	-	99	80.100	ENSCPOG00000002876	-	99	74.875	Cavia_porcellus
MGP_PahariEiJ_G0012821	-	100	71.575	ENSCCAG00000037592	-	99	71.575	Cebus_capucinus
MGP_PahariEiJ_G0012821	-	99	70.603	ENSCATG00000038627	-	99	70.603	Cercocebus_atys
MGP_PahariEiJ_G0012821	-	99	77.478	ENSCLAG00000012138	-	93	74.270	Chinchilla_lanigera
MGP_PahariEiJ_G0012821	-	99	75.279	ENSCSAG00000004794	-	98	75.279	Chlorocebus_sabaeus
MGP_PahariEiJ_G0012821	-	68	92.308	ENSCHOG00000009768	-	53	92.308	Choloepus_hoffmanni
MGP_PahariEiJ_G0012821	-	97	68.159	ENSCPBG00000000147	-	94	64.632	Chrysemys_picta_bellii
MGP_PahariEiJ_G0012821	-	100	72.860	ENSCANG00000040785	-	99	72.860	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0012821	-	98	93.970	ENSCGRG00001021407	-	99	91.133	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0012821	-	94	93.229	ENSCGRG00000007286	-	100	87.738	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0012821	-	86	41.192	ENSCSEG00000001744	-	74	41.940	Cynoglossus_semilaevis
MGP_PahariEiJ_G0012821	-	61	43.086	ENSCVAG00000004277	tdrd12	96	39.153	Cyprinodon_variegatus
MGP_PahariEiJ_G0012821	-	85	46.540	ENSDARG00000075217	tdrd12	69	46.540	Danio_rerio
MGP_PahariEiJ_G0012821	-	97	81.218	ENSDNOG00000017244	-	92	76.255	Dasypus_novemcinctus
MGP_PahariEiJ_G0012821	-	97	82.234	ENSDORG00000012134	-	98	74.792	Dipodomys_ordii
MGP_PahariEiJ_G0012821	-	71	73.973	ENSETEG00000015088	-	79	74.737	Echinops_telfairi
MGP_PahariEiJ_G0012821	-	94	83.333	ENSEASG00005021053	-	98	73.942	Equus_asinus_asinus
MGP_PahariEiJ_G0012821	-	88	88.776	ENSEEUG00000008457	-	92	88.776	Erinaceus_europaeus
MGP_PahariEiJ_G0012821	-	96	40.782	ENSELUG00000017494	tdrd12	91	43.329	Esox_lucius
MGP_PahariEiJ_G0012821	-	97	48.744	ENSFALG00000000259	-	92	44.045	Ficedula_albicollis
MGP_PahariEiJ_G0012821	-	99	79.104	ENSFDAG00000014797	-	99	74.938	Fukomys_damarensis
MGP_PahariEiJ_G0012821	-	73	47.973	ENSFHEG00000002884	-	56	46.486	Fundulus_heteroclitus
MGP_PahariEiJ_G0012821	-	94	55.897	ENSGALG00000004704	-	93	55.686	Gallus_gallus
MGP_PahariEiJ_G0012821	-	89	42.723	ENSGAFG00000003729	tdrd12	82	42.723	Gambusia_affinis
MGP_PahariEiJ_G0012821	-	97	69.154	ENSGAGG00000000247	-	93	68.061	Gopherus_agassizii
MGP_PahariEiJ_G0012821	-	100	75.514	ENSGGOG00000011938	-	99	75.514	Gorilla_gorilla
MGP_PahariEiJ_G0012821	-	80	45.508	ENSHBUG00000020426	tdrd12	90	45.508	Haplochromis_burtoni
MGP_PahariEiJ_G0012821	-	99	82.587	ENSHGLG00000015608	-	100	76.471	Heterocephalus_glaber_female
MGP_PahariEiJ_G0012821	-	95	80.102	ENSHGLG00100008227	-	99	77.901	Heterocephalus_glaber_male
MGP_PahariEiJ_G0012821	-	51	38.095	ENSHCOG00000016160	-	75	47.183	Hippocampus_comes
MGP_PahariEiJ_G0012821	-	83	44.292	ENSIPUG00000016825	tdrd12	79	42.105	Ictalurus_punctatus
MGP_PahariEiJ_G0012821	-	100	86.765	ENSSTOG00000013638	-	100	80.882	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0012821	-	65	44.037	ENSKMAG00000008031	tdrd12	83	44.037	Kryptolebias_marmoratus
MGP_PahariEiJ_G0012821	-	96	38.668	ENSLBEG00000005601	tdrd12	99	38.668	Labrus_bergylta
MGP_PahariEiJ_G0012821	-	97	55.825	ENSLACG00000010650	-	99	50.721	Latimeria_chalumnae
MGP_PahariEiJ_G0012821	-	86	48.158	ENSLOCG00000001690	tdrd12	80	43.721	Lepisosteus_oculatus
MGP_PahariEiJ_G0012821	-	94	81.675	ENSLAFG00000008698	-	99	79.457	Loxodonta_africana
MGP_PahariEiJ_G0012821	-	100	75.942	ENSMFAG00000044756	-	99	75.942	Macaca_fascicularis
MGP_PahariEiJ_G0012821	-	100	76.113	ENSMMUG00000015608	-	99	76.113	Macaca_mulatta
MGP_PahariEiJ_G0012821	-	99	76.034	ENSMNEG00000043067	-	99	76.034	Macaca_nemestrina
MGP_PahariEiJ_G0012821	-	97	76.142	ENSMLEG00000042036	-	99	70.258	Mandrillus_leucophaeus
MGP_PahariEiJ_G0012821	-	95	39.721	ENSMAMG00000013867	tdrd12	99	39.721	Mastacembelus_armatus
MGP_PahariEiJ_G0012821	-	81	45.180	ENSMZEG00005024214	tdrd12	91	45.180	Maylandia_zebra
MGP_PahariEiJ_G0012821	-	69	50.588	ENSMGAG00000005627	-	100	56.936	Meleagris_gallopavo
MGP_PahariEiJ_G0012821	-	100	85.808	ENSMAUG00000013767	-	100	85.808	Mesocricetus_auratus
MGP_PahariEiJ_G0012821	-	97	81.218	ENSMICG00000003623	-	99	77.991	Microcebus_murinus
MGP_PahariEiJ_G0012821	-	97	90.863	ENSMOCG00000002366	-	99	88.696	Microtus_ochrogaster
MGP_PahariEiJ_G0012821	-	95	39.192	ENSMMOG00000018662	tdrd12	99	39.192	Mola_mola
MGP_PahariEiJ_G0012821	-	97	76.768	ENSMODG00000012286	-	92	67.273	Monodelphis_domestica
MGP_PahariEiJ_G0012821	-	87	42.723	ENSMALG00000006918	tdrd12	82	42.723	Monopterus_albus
MGP_PahariEiJ_G0012821	-	100	95.098	MGP_CAROLIEiJ_G0029587	-	100	95.098	Mus_caroli
MGP_PahariEiJ_G0012821	-	100	96.078	MGP_SPRETEiJ_G0030686	-	100	96.078	Mus_spretus
MGP_PahariEiJ_G0012821	-	97	82.741	ENSMPUG00000007791	-	92	74.652	Mustela_putorius_furo
MGP_PahariEiJ_G0012821	-	97	82.741	ENSMLUG00000010694	-	99	79.939	Myotis_lucifugus
MGP_PahariEiJ_G0012821	-	100	86.275	ENSNGAG00000000793	-	99	81.946	Nannospalax_galili
MGP_PahariEiJ_G0012821	-	64	42.061	ENSNBRG00000017878	-	95	44.330	Neolamprologus_brichardi
MGP_PahariEiJ_G0012821	-	100	71.795	ENSNLEG00000007635	-	99	71.795	Nomascus_leucogenys
MGP_PahariEiJ_G0012821	-	63	86.111	ENSMEUG00000014059	-	60	84.177	Notamacropus_eugenii
MGP_PahariEiJ_G0012821	-	97	71.066	ENSOPRG00000015809	-	93	69.780	Ochotona_princeps
MGP_PahariEiJ_G0012821	-	99	82.090	ENSODEG00000014443	-	99	75.214	Octodon_degus
MGP_PahariEiJ_G0012821	-	95	41.475	ENSONIG00000010630	tdrd12	99	41.376	Oreochromis_niloticus
MGP_PahariEiJ_G0012821	-	94	67.876	ENSOANG00000029442	-	99	60.284	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0012821	-	97	80.711	ENSOCUG00000016911	-	98	77.638	Oryctolagus_cuniculus
MGP_PahariEiJ_G0012821	-	79	42.044	ENSORLG00000027859	tdrd12	77	40.927	Oryzias_latipes
MGP_PahariEiJ_G0012821	-	85	44.951	ENSORLG00015020835	tdrd12	70	44.951	Oryzias_latipes_hsok
MGP_PahariEiJ_G0012821	-	84	42.254	ENSOMEG00000021862	tdrd12	90	42.254	Oryzias_melastigma
MGP_PahariEiJ_G0012821	-	96	80.417	ENSOGAG00000001571	-	99	80.417	Otolemur_garnettii
MGP_PahariEiJ_G0012821	-	99	81.491	ENSOARG00000004254	-	92	78.198	Ovis_aries
MGP_PahariEiJ_G0012821	-	97	75.635	ENSPPAG00000042284	-	99	73.259	Pan_paniscus
MGP_PahariEiJ_G0012821	-	97	82.234	ENSPPRG00000002389	-	99	77.163	Panthera_pardus
MGP_PahariEiJ_G0012821	-	100	72.688	ENSPTRG00000010795	TDRD12	99	72.712	Pan_troglodytes
MGP_PahariEiJ_G0012821	-	93	87.129	ENSPANG00000001203	-	93	87.129	Papio_anubis
MGP_PahariEiJ_G0012821	-	92	47.214	ENSPKIG00000006407	tdrd12	76	47.214	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0012821	-	94	69.430	ENSPSIG00000012970	-	100	67.000	Pelodiscus_sinensis
MGP_PahariEiJ_G0012821	-	83	43.454	ENSPMGG00000022691	tdrd12	92	43.454	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0012821	-	98	94.472	ENSPEMG00000009233	-	100	90.461	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0012821	-	97	74.112	ENSPCIG00000020993	-	92	65.136	Phascolarctos_cinereus
MGP_PahariEiJ_G0012821	-	89	42.723	ENSPFOG00000008184	tdrd12	84	42.723	Poecilia_formosa
MGP_PahariEiJ_G0012821	-	74	43.709	ENSPMEG00000006420	tdrd12	92	44.685	Poecilia_mexicana
MGP_PahariEiJ_G0012821	-	76	43.843	ENSPREG00000004916	tdrd12	77	43.243	Poecilia_reticulata
MGP_PahariEiJ_G0012821	-	100	75.771	ENSPPYG00000009821	-	97	75.771	Pongo_abelii
MGP_PahariEiJ_G0012821	-	93	78.421	ENSPCAG00000013510	-	85	69.574	Procavia_capensis
MGP_PahariEiJ_G0012821	-	100	73.150	ENSPCOG00000023600	-	99	73.173	Propithecus_coquereli
MGP_PahariEiJ_G0012821	-	90	91.237	ENSPVAG00000014599	-	91	91.237	Pteropus_vampyrus
MGP_PahariEiJ_G0012821	-	80	45.508	ENSPNYG00000022866	tdrd12	88	45.508	Pundamilia_nyererei
MGP_PahariEiJ_G0012821	-	80	45.614	ENSPNAG00000003413	tdrd12	87	44.539	Pygocentrus_nattereri
MGP_PahariEiJ_G0012821	-	100	92.133	ENSRNOG00000012719	Tdrd12	94	91.509	Rattus_norvegicus
MGP_PahariEiJ_G0012821	-	99	70.645	ENSRBIG00000019899	-	99	70.645	Rhinopithecus_bieti
MGP_PahariEiJ_G0012821	-	100	75.257	ENSRROG00000036351	-	99	75.257	Rhinopithecus_roxellana
MGP_PahariEiJ_G0012821	-	100	75.257	ENSSBOG00000034916	-	99	75.257	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0012821	-	97	76.263	ENSSHAG00000002599	-	99	68.312	Sarcophilus_harrisii
MGP_PahariEiJ_G0012821	-	78	46.494	ENSSFOG00015000297	tdrd12	81	46.189	Scleropages_formosus
MGP_PahariEiJ_G0012821	-	95	39.437	ENSSMAG00000002870	tdrd12	89	44.702	Scophthalmus_maximus
MGP_PahariEiJ_G0012821	-	80	45.735	ENSSDUG00000017304	tdrd12	88	45.735	Seriola_dumerili
MGP_PahariEiJ_G0012821	-	80	44.853	ENSSLDG00000004415	tdrd12	87	44.853	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0012821	-	97	79.188	ENSSARG00000005357	-	91	83.175	Sorex_araneus
MGP_PahariEiJ_G0012821	-	94	63.077	ENSSPUG00000013174	-	96	59.664	Sphenodon_punctatus
MGP_PahariEiJ_G0012821	-	67	58.696	ENSSPAG00000005706	tdrd12	77	58.696	Stegastes_partitus
MGP_PahariEiJ_G0012821	-	86	76.118	ENSSSCG00000002857	-	96	76.118	Sus_scrofa
MGP_PahariEiJ_G0012821	-	59	50.906	ENSTGUG00000009121	-	100	52.510	Taeniopygia_guttata
MGP_PahariEiJ_G0012821	-	81	39.362	ENSTRUG00000021888	tdrd12	91	39.362	Takifugu_rubripes
MGP_PahariEiJ_G0012821	-	77	41.772	ENSTNIG00000000465	-	70	47.407	Tetraodon_nigroviridis
MGP_PahariEiJ_G0012821	-	75	85.185	ENSTBEG00000007609	-	76	85.185	Tupaia_belangeri
MGP_PahariEiJ_G0012821	-	96	79.273	ENSTTRG00000012206	-	99	79.273	Tursiops_truncatus
MGP_PahariEiJ_G0012821	-	99	77.632	ENSUAMG00000007298	-	96	77.632	Ursus_americanus
MGP_PahariEiJ_G0012821	-	99	77.281	ENSUMAG00000014314	-	96	77.281	Ursus_maritimus
MGP_PahariEiJ_G0012821	-	97	73.096	ENSVPAG00000012051	-	100	71.209	Vicugna_pacos
MGP_PahariEiJ_G0012821	-	97	82.741	ENSVVUG00000016637	-	90	79.156	Vulpes_vulpes
MGP_PahariEiJ_G0012821	-	70	42.691	ENSXETG00000031945	-	98	42.463	Xenopus_tropicalis
MGP_PahariEiJ_G0012821	-	94	40.227	ENSXMAG00000020908	tdrd12	97	40.227	Xiphophorus_maculatus