EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0013129 (Gene tree)
Gene ID: 110318609
Gene Symbol: Blm
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 89271 bases
Position: chr1:51968870-52058140
Accession: 110318609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0017242	HRDC	PF00570.23	1.8e-11	1	1
MGP_PahariEiJ_P0017243	HRDC	PF00570.23	1.8e-11	1	1
MGP_PahariEiJ_P0017242	BDHCT	PF08072.11	2.8e-21	1	1
MGP_PahariEiJ_P0017243	BDHCT	PF08072.11	2.8e-21	1	1
MGP_PahariEiJ_P0017242	DEAD	PF00270.29	9.8e-20	1	1
MGP_PahariEiJ_P0017243	DEAD	PF00270.29	9.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0017250	-	754	-	-	- (aa)	-	-
MGP_PahariEiJ_T0017249	-	2297	-	-	- (aa)	-	-
MGP_PahariEiJ_T0017248	-	3555	-	-	- (aa)	-	-
MGP_PahariEiJ_T0017247	-	463	-	MGP_PahariEiJ_P0017247	49 (aa)	-	-
MGP_PahariEiJ_T0017246	-	392	-	MGP_PahariEiJ_P0017246	45 (aa)	-	-
MGP_PahariEiJ_T0017245	-	482	-	-	- (aa)	-	-
MGP_PahariEiJ_T0017244	-	555	-	-	- (aa)	-	-
MGP_PahariEiJ_T0017243	-	4851	-	MGP_PahariEiJ_P0017243	1408 (aa)	-	UPI000A30B57E
MGP_PahariEiJ_T0017242	-	4567	XM_021193780	MGP_PahariEiJ_P0017242	1408 (aa)	XP_021049439	UPI000A30B57E
MGP_PahariEiJ_T0017241	-	965	-	MGP_PahariEiJ_P0017241	153 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0013129's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0013129's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0013129	Blm	100	76.297	ENSG00000197299	BLM	100	76.772	Homo_sapiens
MGP_PahariEiJ_G0013129	Blm	59	61.657	ENSAPOG00000017966	blm	62	61.657	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0013129	Blm	100	75.473	ENSAMEG00000013843	BLM	100	75.964	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0013129	Blm	68	62.233	ENSACIG00000023762	blm	68	62.134	Amphilophus_citrinellus
MGP_PahariEiJ_G0013129	Blm	59	62.338	ENSAOCG00000003318	blm	60	62.102	Amphiprion_ocellaris
MGP_PahariEiJ_G0013129	Blm	59	62.220	ENSAPEG00000018105	blm	59	61.983	Amphiprion_percula
MGP_PahariEiJ_G0013129	Blm	84	66.879	ENSATEG00000006421	blm	85	66.624	Anabas_testudineus
MGP_PahariEiJ_G0013129	Blm	81	57.427	ENSAPLG00000006878	BLM	99	57.190	Anas_platyrhynchos
MGP_PahariEiJ_G0013129	Blm	74	57.553	ENSACAG00000014275	BLM	99	49.216	Anolis_carolinensis
MGP_PahariEiJ_G0013129	Blm	100	75.264	ENSANAG00000038415	BLM	100	75.966	Aotus_nancymaae
MGP_PahariEiJ_G0013129	Blm	88	62.854	ENSACLG00000020354	blm	85	62.515	Astatotilapia_calliptera
MGP_PahariEiJ_G0013129	Blm	84	65.345	ENSAMXG00000016970	blm	88	62.209	Astyanax_mexicanus
MGP_PahariEiJ_G0013129	Blm	93	77.778	ENSBTAG00000020301	BLM	100	77.778	Bos_taurus
MGP_PahariEiJ_G0013129	Blm	100	74.842	ENSCJAG00000009803	BLM	100	75.615	Callithrix_jacchus
MGP_PahariEiJ_G0013129	Blm	100	75.140	ENSCAFG00000012385	BLM	100	74.930	Canis_familiaris
MGP_PahariEiJ_G0013129	Blm	100	75.070	ENSCAFG00020016111	BLM	93	89.481	Canis_lupus_dingo
MGP_PahariEiJ_G0013129	Blm	100	75.000	ENSCHIG00000010329	BLM	100	77.632	Capra_hircus
MGP_PahariEiJ_G0013129	Blm	100	76.017	ENSTSYG00000012368	BLM	100	76.508	Carlito_syrichta
MGP_PahariEiJ_G0013129	Blm	88	82.709	ENSCAPG00000017976	BLM	99	81.988	Cavia_aperea
MGP_PahariEiJ_G0013129	Blm	100	73.931	ENSCPOG00000001761	BLM	100	73.791	Cavia_porcellus
MGP_PahariEiJ_G0013129	Blm	100	73.629	ENSCCAG00000023069	BLM	100	74.895	Cebus_capucinus
MGP_PahariEiJ_G0013129	Blm	100	75.685	ENSCATG00000040609	BLM	92	92.183	Cercocebus_atys
MGP_PahariEiJ_G0013129	Blm	100	75.386	ENSCLAG00000012111	BLM	100	75.456	Chinchilla_lanigera
MGP_PahariEiJ_G0013129	Blm	100	75.122	ENSCSAG00000017040	BLM	100	75.961	Chlorocebus_sabaeus
MGP_PahariEiJ_G0013129	Blm	91	74.105	ENSCHOG00000006255	BLM	93	72.765	Choloepus_hoffmanni
MGP_PahariEiJ_G0013129	Blm	89	54.670	ENSCPBG00000025000	BLM	90	73.640	Chrysemys_picta_bellii
MGP_PahariEiJ_G0013129	Blm	89	66.161	ENSCANG00000034808	BLM	100	66.959	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0013129	Blm	100	85.057	ENSCGRG00001024897	Blm	100	85.198	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0013129	Blm	68	81.505	ENSCGRG00000016261	Blm	97	81.714	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0013129	Blm	55	65.985	ENSCSEG00000013483	blm	60	65.732	Cynoglossus_semilaevis
MGP_PahariEiJ_G0013129	Blm	84	65.823	ENSDARG00000077089	blm	72	79.512	Danio_rerio
MGP_PahariEiJ_G0013129	Blm	99	72.568	ENSDNOG00000010159	BLM	99	72.638	Dasypus_novemcinctus
MGP_PahariEiJ_G0013129	Blm	73	80.153	ENSDORG00000011033	Blm	100	80.537	Dipodomys_ordii
MGP_PahariEiJ_G0013129	Blm	79	80.833	ENSETEG00000015019	BLM	85	63.095	Echinops_telfairi
MGP_PahariEiJ_G0013129	Blm	100	73.836	ENSEASG00005006727	BLM	100	73.843	Equus_asinus_asinus
MGP_PahariEiJ_G0013129	Blm	100	75.539	ENSECAG00000011405	BLM	100	75.678	Equus_caballus
MGP_PahariEiJ_G0013129	Blm	98	70.719	ENSEEUG00000001434	BLM	98	70.187	Erinaceus_europaeus
MGP_PahariEiJ_G0013129	Blm	84	67.045	ENSELUG00000019098	blm	83	66.793	Esox_lucius
MGP_PahariEiJ_G0013129	Blm	100	73.441	ENSFCAG00000006087	BLM	100	73.721	Felis_catus
MGP_PahariEiJ_G0013129	Blm	74	57.366	ENSFALG00000010981	BLM	86	67.110	Ficedula_albicollis
MGP_PahariEiJ_G0013129	Blm	100	68.697	ENSFDAG00000012658	BLM	100	70.728	Fukomys_damarensis
MGP_PahariEiJ_G0013129	Blm	59	62.633	ENSFHEG00000002553	blm	60	62.633	Fundulus_heteroclitus
MGP_PahariEiJ_G0013129	Blm	84	62.708	ENSGMOG00000016431	blm	90	60.633	Gadus_morhua
MGP_PahariEiJ_G0013129	Blm	99	49.863	ENSGALG00000008256	BLM	87	67.096	Gallus_gallus
MGP_PahariEiJ_G0013129	Blm	55	65.633	ENSGAFG00000001117	blm	59	65.851	Gambusia_affinis
MGP_PahariEiJ_G0013129	Blm	64	65.140	ENSGACG00000010863	blm	100	73.384	Gasterosteus_aculeatus
MGP_PahariEiJ_G0013129	Blm	51	76.774	ENSGAGG00000005383	BLM	82	76.774	Gopherus_agassizii
MGP_PahariEiJ_G0013129	Blm	100	75.947	ENSGGOG00000007710	BLM	92	92.225	Gorilla_gorilla
MGP_PahariEiJ_G0013129	Blm	59	62.500	ENSHBUG00000015943	blm	60	62.500	Haplochromis_burtoni
MGP_PahariEiJ_G0013129	Blm	100	75.651	ENSHGLG00000013231	BLM	99	76.247	Heterocephalus_glaber_female
MGP_PahariEiJ_G0013129	Blm	73	55.545	ENSHCOG00000011455	blm	83	62.440	Hippocampus_comes
MGP_PahariEiJ_G0013129	Blm	74	54.798	ENSIPUG00000000529	blm	68	65.513	Ictalurus_punctatus
MGP_PahariEiJ_G0013129	Blm	100	76.756	ENSSTOG00000005000	BLM	100	77.171	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0013129	Blm	66	87.046	ENSJJAG00000016322	Blm	94	87.204	Jaculus_jaculus
MGP_PahariEiJ_G0013129	Blm	59	63.294	ENSKMAG00000016608	blm	69	62.972	Kryptolebias_marmoratus
MGP_PahariEiJ_G0013129	Blm	99	51.116	ENSLACG00000006490	BLM	99	51.313	Latimeria_chalumnae
MGP_PahariEiJ_G0013129	Blm	99	46.252	ENSLOCG00000014302	blm	87	63.486	Lepisosteus_oculatus
MGP_PahariEiJ_G0013129	Blm	100	75.685	ENSMFAG00000042982	BLM	92	92.453	Macaca_fascicularis
MGP_PahariEiJ_G0013129	Blm	100	75.685	ENSMMUG00000019526	BLM	92	92.453	Macaca_mulatta
MGP_PahariEiJ_G0013129	Blm	99	73.684	ENSMNEG00000031251	BLM	92	92.183	Macaca_nemestrina
MGP_PahariEiJ_G0013129	Blm	100	73.296	ENSMLEG00000032934	BLM	100	73.858	Mandrillus_leucophaeus
MGP_PahariEiJ_G0013129	Blm	60	63.392	ENSMAMG00000008726	blm	99	46.685	Mastacembelus_armatus
MGP_PahariEiJ_G0013129	Blm	59	62.500	ENSMZEG00005022323	blm	59	62.736	Maylandia_zebra
MGP_PahariEiJ_G0013129	Blm	100	84.919	ENSMAUG00000008953	Blm	99	84.870	Mesocricetus_auratus
MGP_PahariEiJ_G0013129	Blm	100	76.087	ENSMICG00000034442	BLM	100	76.227	Microcebus_murinus
MGP_PahariEiJ_G0013129	Blm	100	83.380	ENSMOCG00000016367	Blm	99	83.380	Microtus_ochrogaster
MGP_PahariEiJ_G0013129	Blm	55	65.653	ENSMMOG00000006959	blm	86	65.311	Mola_mola
MGP_PahariEiJ_G0013129	Blm	99	61.365	ENSMODG00000019449	BLM	99	61.843	Monodelphis_domestica
MGP_PahariEiJ_G0013129	Blm	88	64.516	ENSMALG00000007323	blm	88	63.830	Monopterus_albus
MGP_PahariEiJ_G0013129	Blm	100	94.113	MGP_CAROLIEiJ_G0029907	Blm	100	94.255	Mus_caroli
MGP_PahariEiJ_G0013129	Blm	100	94.562	ENSMUSG00000030528	Blm	100	94.350	Mus_musculus
MGP_PahariEiJ_G0013129	Blm	100	94.904	MGP_SPRETEiJ_G0031009	Blm	100	94.904	Mus_spretus
MGP_PahariEiJ_G0013129	Blm	84	73.410	ENSMPUG00000015657	BLM	99	74.071	Mustela_putorius_furo
MGP_PahariEiJ_G0013129	Blm	100	74.103	ENSMLUG00000014697	BLM	100	74.157	Myotis_lucifugus
MGP_PahariEiJ_G0013129	Blm	100	81.263	ENSNGAG00000001275	Blm	100	81.334	Nannospalax_galili
MGP_PahariEiJ_G0013129	Blm	59	62.441	ENSNBRG00000019702	blm	59	62.618	Neolamprologus_brichardi
MGP_PahariEiJ_G0013129	Blm	100	74.614	ENSNLEG00000012087	BLM	100	79.771	Nomascus_leucogenys
MGP_PahariEiJ_G0013129	Blm	99	59.215	ENSMEUG00000007253	BLM	99	59.327	Notamacropus_eugenii
MGP_PahariEiJ_G0013129	Blm	95	86.704	ENSOPRG00000011667	BLM	95	86.130	Ochotona_princeps
MGP_PahariEiJ_G0013129	Blm	73	76.577	ENSODEG00000015373	BLM	100	76.577	Octodon_degus
MGP_PahariEiJ_G0013129	Blm	88	62.324	ENSONIG00000015193	blm	89	62.559	Oreochromis_niloticus
MGP_PahariEiJ_G0013129	Blm	53	81.120	ENSOANG00000009316	-	99	80.909	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0013129	Blm	99	71.529	ENSOCUG00000013969	BLM	99	71.529	Oryctolagus_cuniculus
MGP_PahariEiJ_G0013129	Blm	62	63.571	ENSORLG00000008110	blm	63	63.658	Oryzias_latipes
MGP_PahariEiJ_G0013129	Blm	68	63.810	ENSORLG00020004812	blm	68	63.658	Oryzias_latipes_hni
MGP_PahariEiJ_G0013129	Blm	65	63.929	ENSORLG00015018640	blm	78	66.667	Oryzias_latipes_hsok
MGP_PahariEiJ_G0013129	Blm	68	62.336	ENSOMEG00000023545	blm	68	62.336	Oryzias_melastigma
MGP_PahariEiJ_G0013129	Blm	100	72.000	ENSOGAG00000005708	BLM	100	72.140	Otolemur_garnettii
MGP_PahariEiJ_G0013129	Blm	100	74.043	ENSOARG00000012875	BLM	100	74.461	Ovis_aries
MGP_PahariEiJ_G0013129	Blm	100	76.247	ENSPPAG00000032173	BLM	100	76.702	Pan_paniscus
MGP_PahariEiJ_G0013129	Blm	100	73.791	ENSPPRG00000002471	BLM	100	74.071	Panthera_pardus
MGP_PahariEiJ_G0013129	Blm	100	73.408	ENSPTIG00000016168	BLM	100	73.688	Panthera_tigris_altaica
MGP_PahariEiJ_G0013129	Blm	100	76.017	ENSPTRG00000007460	BLM	100	76.491	Pan_troglodytes
MGP_PahariEiJ_G0013129	Blm	100	75.755	ENSPANG00000018572	BLM	92	92.453	Papio_anubis
MGP_PahariEiJ_G0013129	Blm	88	62.752	ENSPKIG00000008954	blm	76	62.989	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0013129	Blm	50	67.594	ENSPMGG00000006629	blm	80	66.988	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0013129	Blm	100	84.512	ENSPEMG00000017348	Blm	100	84.322	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0013129	Blm	50	59.551	ENSPMAG00000000445	blm	96	59.691	Petromyzon_marinus
MGP_PahariEiJ_G0013129	Blm	99	60.446	ENSPCIG00000006609	BLM	99	61.009	Phascolarctos_cinereus
MGP_PahariEiJ_G0013129	Blm	58	62.892	ENSPFOG00000005059	blm	99	47.274	Poecilia_formosa
MGP_PahariEiJ_G0013129	Blm	55	65.504	ENSPLAG00000017344	blm	56	65.891	Poecilia_latipinna
MGP_PahariEiJ_G0013129	Blm	55	65.633	ENSPMEG00000000321	blm	56	65.891	Poecilia_mexicana
MGP_PahariEiJ_G0013129	Blm	55	65.504	ENSPREG00000007715	blm	56	65.633	Poecilia_reticulata
MGP_PahariEiJ_G0013129	Blm	100	74.476	ENSPPYG00000006784	BLM	100	74.948	Pongo_abelii
MGP_PahariEiJ_G0013129	Blm	73	87.097	ENSPCAG00000008960	BLM	73	87.097	Procavia_capensis
MGP_PahariEiJ_G0013129	Blm	100	70.757	ENSPCOG00000000439	BLM	100	71.856	Propithecus_coquereli
MGP_PahariEiJ_G0013129	Blm	80	94.534	ENSPVAG00000011642	BLM	83	94.534	Pteropus_vampyrus
MGP_PahariEiJ_G0013129	Blm	59	51.174	ENSPNYG00000010956	blm	57	51.179	Pundamilia_nyererei
MGP_PahariEiJ_G0013129	Blm	58	64.982	ENSPNAG00000011714	blm	68	64.769	Pygocentrus_nattereri
MGP_PahariEiJ_G0013129	Blm	100	88.377	ENSRNOG00000011213	Blm	100	88.393	Rattus_norvegicus
MGP_PahariEiJ_G0013129	Blm	100	73.928	ENSRBIG00000029656	BLM	92	91.105	Rhinopithecus_bieti
MGP_PahariEiJ_G0013129	Blm	100	75.264	ENSRROG00000037871	BLM	92	91.105	Rhinopithecus_roxellana
MGP_PahariEiJ_G0013129	Blm	91	73.871	ENSSBOG00000030957	BLM	100	74.579	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0013129	Blm	99	61.192	ENSSHAG00000007988	BLM	99	61.538	Sarcophilus_harrisii
MGP_PahariEiJ_G0013129	Blm	54	65.350	ENSSFOG00015015462	blm	63	64.322	Scleropages_formosus
MGP_PahariEiJ_G0013129	Blm	59	61.720	ENSSMAG00000001120	blm	60	61.720	Scophthalmus_maximus
MGP_PahariEiJ_G0013129	Blm	58	63.397	ENSSDUG00000010955	blm	59	63.033	Seriola_dumerili
MGP_PahariEiJ_G0013129	Blm	59	63.270	ENSSLDG00000000634	blm	59	63.270	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0013129	Blm	94	66.241	ENSSARG00000006398	BLM	99	65.442	Sorex_araneus
MGP_PahariEiJ_G0013129	Blm	74	59.189	ENSSPUG00000000013	BLM	96	56.510	Sphenodon_punctatus
MGP_PahariEiJ_G0013129	Blm	55	66.156	ENSSPAG00000013999	blm	56	66.539	Stegastes_partitus
MGP_PahariEiJ_G0013129	Blm	100	74.704	ENSSSCG00000001816	BLM	99	74.728	Sus_scrofa
MGP_PahariEiJ_G0013129	Blm	79	50.606	ENSTGUG00000009959	-	74	59.001	Taeniopygia_guttata
MGP_PahariEiJ_G0013129	Blm	84	64.533	ENSTNIG00000019246	blm	85	64.834	Tetraodon_nigroviridis
MGP_PahariEiJ_G0013129	Blm	79	80.492	ENSTBEG00000006706	BLM	81	80.492	Tupaia_belangeri
MGP_PahariEiJ_G0013129	Blm	100	75.018	ENSTTRG00000016386	BLM	100	75.298	Tursiops_truncatus
MGP_PahariEiJ_G0013129	Blm	100	75.719	ENSUMAG00000009105	BLM	97	89.851	Ursus_maritimus
MGP_PahariEiJ_G0013129	Blm	99	72.523	ENSVPAG00000000085	BLM	99	73.315	Vicugna_pacos
MGP_PahariEiJ_G0013129	Blm	95	87.123	ENSVVUG00000006402	BLM	99	87.260	Vulpes_vulpes
MGP_PahariEiJ_G0013129	Blm	55	61.727	ENSXCOG00000020227	blm	55	62.371	Xiphophorus_couchianus
MGP_PahariEiJ_G0013129	Blm	55	65.077	ENSXMAG00000002951	blm	56	65.335	Xiphophorus_maculatus