EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0013451 (Gene tree)
Gene ID: 110335771
Gene Symbol: Rrp8
Alias: 1500003O22Rik|2900001K19Rik
Full Name: ribosomal RNA processing 8
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 5398 bases
Position: chr1:75945114-75950511
Accession: 110335771
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0018168	Methyltransf_8	PF05148.15	3.9e-104	1	1
MGP_PahariEiJ_P0018167	Methyltransf_8	PF05148.15	4e-104	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0018170	-	545	-	-	- (aa)	-	-
MGP_PahariEiJ_T0018171	-	521	-	-	- (aa)	-	-
MGP_PahariEiJ_T0018172	-	411	-	-	- (aa)	-	-
MGP_PahariEiJ_T0018167	-	2567	XM_021218120	MGP_PahariEiJ_P0018167	457 (aa)	XP_021073779	UPI000A314064
MGP_PahariEiJ_T0018169	-	827	-	-	- (aa)	-	-
MGP_PahariEiJ_T0018168	-	2199	-	MGP_PahariEiJ_P0018168	455 (aa)	XP_021073787	UPI000A30CF21

Gene Model

Click here to download MGP_PahariEiJ_G0013451's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0013451's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0013451	Rrp8	100	74.891	ENSG00000132275	RRP8	100	75.109	Homo_sapiens
MGP_PahariEiJ_G0013451	Rrp8	100	74.074	ENSAMEG00000016307	RRP8	100	74.728	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0013451	Rrp8	100	75.930	ENSANAG00000028524	RRP8	100	76.368	Aotus_nancymaae
MGP_PahariEiJ_G0013451	Rrp8	62	52.613	ENSAMXG00000005164	rrp8	53	52.613	Astyanax_mexicanus
MGP_PahariEiJ_G0013451	Rrp8	100	74.728	ENSBTAG00000000697	RRP8	100	74.728	Bos_taurus
MGP_PahariEiJ_G0013451	Rrp8	100	74.836	ENSCJAG00000014012	RRP8	100	75.274	Callithrix_jacchus
MGP_PahariEiJ_G0013451	Rrp8	100	71.274	ENSCAFG00000006476	RRP8	68	73.276	Canis_familiaris
MGP_PahariEiJ_G0013451	Rrp8	100	71.274	ENSCAFG00020009685	RRP8	100	73.276	Canis_lupus_dingo
MGP_PahariEiJ_G0013451	Rrp8	100	74.292	ENSCHIG00000019002	RRP8	94	74.292	Capra_hircus
MGP_PahariEiJ_G0013451	Rrp8	100	74.728	ENSTSYG00000003391	RRP8	100	75.163	Carlito_syrichta
MGP_PahariEiJ_G0013451	Rrp8	85	70.103	ENSCAPG00000013284	RRP8	100	70.619	Cavia_aperea
MGP_PahariEiJ_G0013451	Rrp8	100	73.753	ENSCPOG00000012515	RRP8	100	74.187	Cavia_porcellus
MGP_PahariEiJ_G0013451	Rrp8	100	75.711	ENSCCAG00000035197	RRP8	100	75.930	Cebus_capucinus
MGP_PahariEiJ_G0013451	Rrp8	100	73.581	ENSCATG00000029344	RRP8	100	73.581	Cercocebus_atys
MGP_PahariEiJ_G0013451	Rrp8	100	73.913	ENSCLAG00000016099	RRP8	100	73.913	Chinchilla_lanigera
MGP_PahariEiJ_G0013451	Rrp8	100	72.052	ENSCSAG00000004345	RRP8	100	72.052	Chlorocebus_sabaeus
MGP_PahariEiJ_G0013451	Rrp8	56	48.837	ENSCSAVG00000006435	-	61	48.837	Ciona_savignyi
MGP_PahariEiJ_G0013451	Rrp8	100	73.799	ENSCANG00000040771	RRP8	100	73.799	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0013451	Rrp8	100	88.403	ENSCGRG00001003103	Rrp8	100	88.403	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0013451	Rrp8	100	87.965	ENSCGRG00000014009	Rrp8	100	87.965	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0013451	Rrp8	60	52.899	ENSCSEG00000007330	rrp8	69	52.899	Cynoglossus_semilaevis
MGP_PahariEiJ_G0013451	Rrp8	100	73.913	ENSDNOG00000000812	RRP8	91	74.130	Dasypus_novemcinctus
MGP_PahariEiJ_G0013451	Rrp8	100	76.856	ENSDORG00000000103	Rrp8	100	76.856	Dipodomys_ordii
MGP_PahariEiJ_G0013451	Rrp8	53	40.574	FBgn0034422	CG7137	66	40.574	Drosophila_melanogaster
MGP_PahariEiJ_G0013451	Rrp8	100	71.957	ENSETEG00000008877	RRP8	100	71.957	Echinops_telfairi
MGP_PahariEiJ_G0013451	Rrp8	97	76.018	ENSEASG00005001761	RRP8	100	75.930	Equus_asinus_asinus
MGP_PahariEiJ_G0013451	Rrp8	88	74.690	ENSECAG00000006612	RRP8	83	74.641	Equus_caballus
MGP_PahariEiJ_G0013451	Rrp8	94	72.831	ENSFCAG00000015384	RRP8	84	90.598	Felis_catus
MGP_PahariEiJ_G0013451	Rrp8	100	72.451	ENSFDAG00000008872	RRP8	100	72.451	Fukomys_damarensis
MGP_PahariEiJ_G0013451	Rrp8	55	55.118	ENSGACG00000011343	rrp8	68	55.118	Gasterosteus_aculeatus
MGP_PahariEiJ_G0013451	Rrp8	58	57.455	ENSGAGG00000005261	RRP8	83	46.020	Gopherus_agassizii
MGP_PahariEiJ_G0013451	Rrp8	100	75.764	ENSGGOG00000000389	RRP8	100	75.764	Gorilla_gorilla
MGP_PahariEiJ_G0013451	Rrp8	100	71.957	ENSHGLG00000003980	RRP8	100	71.957	Heterocephalus_glaber_female
MGP_PahariEiJ_G0013451	Rrp8	100	71.957	ENSHGLG00100015659	RRP8	100	71.957	Heterocephalus_glaber_male
MGP_PahariEiJ_G0013451	Rrp8	50	57.018	ENSHCOG00000001293	rrp8	100	37.187	Hippocampus_comes
MGP_PahariEiJ_G0013451	Rrp8	66	46.885	ENSIPUG00000017733	rrp8	58	46.885	Ictalurus_punctatus
MGP_PahariEiJ_G0013451	Rrp8	100	74.236	ENSSTOG00000016272	RRP8	100	75.163	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0013451	Rrp8	100	79.565	ENSJJAG00000020608	-	100	79.565	Jaculus_jaculus
MGP_PahariEiJ_G0013451	Rrp8	68	48.710	ENSLBEG00000019937	rrp8	78	48.710	Labrus_bergylta
MGP_PahariEiJ_G0013451	Rrp8	53	57.600	ENSLACG00000001252	-	64	57.600	Latimeria_chalumnae
MGP_PahariEiJ_G0013451	Rrp8	64	48.966	ENSLOCG00000009591	rrp8	54	48.966	Lepisosteus_oculatus
MGP_PahariEiJ_G0013451	Rrp8	50	44.068	ENSLOCG00000013776	-	95	44.068	Lepisosteus_oculatus
MGP_PahariEiJ_G0013451	Rrp8	100	73.913	ENSLAFG00000000112	RRP8	100	73.913	Loxodonta_africana
MGP_PahariEiJ_G0013451	Rrp8	100	74.017	ENSMFAG00000046084	RRP8	100	74.017	Macaca_fascicularis
MGP_PahariEiJ_G0013451	Rrp8	100	73.799	ENSMMUG00000007738	RRP8	100	73.799	Macaca_mulatta
MGP_PahariEiJ_G0013451	Rrp8	100	73.799	ENSMNEG00000029648	RRP8	100	73.799	Macaca_nemestrina
MGP_PahariEiJ_G0013451	Rrp8	100	74.017	ENSMLEG00000035110	RRP8	100	74.017	Mandrillus_leucophaeus
MGP_PahariEiJ_G0013451	Rrp8	65	49.505	ENSMAMG00000009679	rrp8	53	49.505	Mastacembelus_armatus
MGP_PahariEiJ_G0013451	Rrp8	100	84.449	ENSMAUG00000000324	Rrp8	100	84.449	Mesocricetus_auratus
MGP_PahariEiJ_G0013451	Rrp8	100	73.961	ENSMICG00000038472	RRP8	100	88.034	Microcebus_murinus
MGP_PahariEiJ_G0013451	Rrp8	100	87.746	ENSMOCG00000002486	Rrp8	100	87.746	Microtus_ochrogaster
MGP_PahariEiJ_G0013451	Rrp8	100	96.718	MGP_CAROLIEiJ_G0030236	Rrp8	100	96.718	Mus_caroli
MGP_PahariEiJ_G0013451	Rrp8	100	96.499	ENSMUSG00000030888	Rrp8	100	96.499	Mus_musculus
MGP_PahariEiJ_G0013451	Rrp8	100	96.280	MGP_SPRETEiJ_G0031348	Rrp8	100	96.280	Mus_spretus
MGP_PahariEiJ_G0013451	Rrp8	100	73.866	ENSMPUG00000005510	RRP8	100	74.082	Mustela_putorius_furo
MGP_PahariEiJ_G0013451	Rrp8	100	75.328	ENSMLUG00000008938	RRP8	100	75.983	Myotis_lucifugus
MGP_PahariEiJ_G0013451	Rrp8	100	81.400	ENSNGAG00000012450	Rrp8	100	81.400	Nannospalax_galili
MGP_PahariEiJ_G0013451	Rrp8	56	52.140	ENSNBRG00000023416	rrp8	76	58.879	Neolamprologus_brichardi
MGP_PahariEiJ_G0013451	Rrp8	100	72.429	ENSNLEG00000017445	RRP8	100	72.648	Nomascus_leucogenys
MGP_PahariEiJ_G0013451	Rrp8	60	67.029	ENSMEUG00000004945	-	100	67.029	Notamacropus_eugenii
MGP_PahariEiJ_G0013451	Rrp8	93	74.232	ENSOPRG00000008052	RRP8	100	72.331	Ochotona_princeps
MGP_PahariEiJ_G0013451	Rrp8	100	73.753	ENSODEG00000011209	RRP8	100	73.753	Octodon_degus
MGP_PahariEiJ_G0013451	Rrp8	100	75.274	ENSOCUG00000027619	RRP8	100	75.274	Oryctolagus_cuniculus
MGP_PahariEiJ_G0013451	Rrp8	96	72.336	ENSOGAG00000007184	RRP8	100	72.429	Otolemur_garnettii
MGP_PahariEiJ_G0013451	Rrp8	100	74.728	ENSOARG00000017435	RRP8	70	74.728	Ovis_aries
MGP_PahariEiJ_G0013451	Rrp8	100	74.891	ENSPPAG00000040792	RRP8	100	75.109	Pan_paniscus
MGP_PahariEiJ_G0013451	Rrp8	94	75.289	ENSPPRG00000022654	RRP8	100	74.784	Panthera_pardus
MGP_PahariEiJ_G0013451	Rrp8	94	75.289	ENSPTIG00000011321	RRP8	100	74.784	Panthera_tigris_altaica
MGP_PahariEiJ_G0013451	Rrp8	100	74.891	ENSPTRG00000003297	RRP8	100	74.891	Pan_troglodytes
MGP_PahariEiJ_G0013451	Rrp8	100	73.799	ENSPANG00000006537	RRP8	100	73.799	Papio_anubis
MGP_PahariEiJ_G0013451	Rrp8	100	88.621	ENSPEMG00000017257	Rrp8	100	88.621	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0013451	Rrp8	100	74.836	ENSPPYG00000003538	RRP8	100	75.055	Pongo_abelii
MGP_PahariEiJ_G0013451	Rrp8	100	71.179	ENSPCAG00000016176	RRP8	100	71.179	Procavia_capensis
MGP_PahariEiJ_G0013451	Rrp8	100	74.836	ENSPCOG00000024627	RRP8	100	88.889	Propithecus_coquereli
MGP_PahariEiJ_G0013451	Rrp8	100	74.836	ENSPVAG00000002420	RRP8	100	75.274	Pteropus_vampyrus
MGP_PahariEiJ_G0013451	Rrp8	100	91.466	ENSRNOG00000018766	Rrp8	100	98.605	Rattus_norvegicus
MGP_PahariEiJ_G0013451	Rrp8	100	73.581	ENSRBIG00000044485	RRP8	100	73.581	Rhinopithecus_bieti
MGP_PahariEiJ_G0013451	Rrp8	100	73.144	ENSRROG00000045322	RRP8	100	73.144	Rhinopithecus_roxellana
MGP_PahariEiJ_G0013451	Rrp8	100	75.546	ENSSBOG00000035280	RRP8	100	75.983	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0013451	Rrp8	95	56.364	ENSSHAG00000009273	-	85	56.364	Sarcophilus_harrisii
MGP_PahariEiJ_G0013451	Rrp8	100	73.581	ENSSARG00000007949	RRP8	100	73.581	Sorex_araneus
MGP_PahariEiJ_G0013451	Rrp8	64	52.027	ENSSPAG00000006664	rrp8	79	61.818	Stegastes_partitus
MGP_PahariEiJ_G0013451	Rrp8	100	71.957	ENSSSCG00000023880	RRP8	100	71.957	Sus_scrofa
MGP_PahariEiJ_G0013451	Rrp8	93	75.765	ENSTBEG00000000237	RRP8	100	76.235	Tupaia_belangeri
MGP_PahariEiJ_G0013451	Rrp8	100	75.381	ENSTTRG00000004867	RRP8	100	75.381	Tursiops_truncatus
MGP_PahariEiJ_G0013451	Rrp8	100	74.074	ENSUAMG00000025756	RRP8	100	74.728	Ursus_americanus
MGP_PahariEiJ_G0013451	Rrp8	100	73.856	ENSUMAG00000000528	RRP8	96	74.510	Ursus_maritimus
MGP_PahariEiJ_G0013451	Rrp8	100	73.593	ENSVPAG00000008019	RRP8	100	75.108	Vicugna_pacos
MGP_PahariEiJ_G0013451	Rrp8	100	69.102	ENSVVUG00000024346	RRP8	99	73.154	Vulpes_vulpes
MGP_PahariEiJ_G0013451	Rrp8	55	55.823	ENSXCOG00000006156	rrp8	65	55.823	Xiphophorus_couchianus