EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0013634 (Gene tree)
Gene ID: 110333826
Gene Symbol: Rbbp6
Alias: 4933422O15Rik|C030034J04Rik
Full Name: RB binding protein 6%2C ubiquitin ligase
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 36651 bases
Position: chr1:92557155-92593805
Accession: 110333826
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0018776	zf-CCHC_2	PF13696.6	6e-09	1	1
MGP_PahariEiJ_P0018781	zf-CCHC_2	PF13696.6	1.5e-08	1	1
MGP_PahariEiJ_P0018778	zf-CCHC_2	PF13696.6	1.5e-08	1	1
MGP_PahariEiJ_P0018781	zf-CCHC	PF00098.23	7.7e-05	1	1
MGP_PahariEiJ_P0018778	zf-CCHC	PF00098.23	8.8e-05	1	1
MGP_PahariEiJ_P0018776	zf-CCHC	PF00098.23	9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0018776	-	6187	XM_021215565	MGP_PahariEiJ_P0018776	1790 (aa)	XP_021071224	UPI000A310203
MGP_PahariEiJ_T0018777	-	6370	-	MGP_PahariEiJ_P0018777	123 (aa)	-	UPI00000281EB
MGP_PahariEiJ_T0018775	-	477	-	MGP_PahariEiJ_P0018775	79 (aa)	-	UPI0003F485C5
MGP_PahariEiJ_T0018778	-	5729	-	MGP_PahariEiJ_P0018778	1756 (aa)	XP_021071231	UPI000A30EC09
MGP_PahariEiJ_T0018779	-	603	-	-	- (aa)	-	-
MGP_PahariEiJ_T0018783	-	538	-	-	- (aa)	-	-
MGP_PahariEiJ_T0018782	-	701	-	-	- (aa)	-	-
MGP_PahariEiJ_T0018781	-	5772	-	MGP_PahariEiJ_P0018781	1707 (aa)	-	-
MGP_PahariEiJ_T0018780	-	814	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0013634's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0013634's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0013634	Rbbp6	93	90.684	ENSG00000122257	RBBP6	100	97.010	Homo_sapiens
MGP_PahariEiJ_G0013634	Rbbp6	94	86.639	ENSAMEG00000009312	RBBP6	94	86.639	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0013634	Rbbp6	93	70.311	ENSAPLG00000009569	RBBP6	96	71.685	Anas_platyrhynchos
MGP_PahariEiJ_G0013634	Rbbp6	94	87.957	ENSANAG00000037384	RBBP6	96	92.148	Aotus_nancymaae
MGP_PahariEiJ_G0013634	Rbbp6	94	87.743	ENSBTAG00000009441	RBBP6	61	82.940	Bos_taurus
MGP_PahariEiJ_G0013634	Rbbp6	94	87.072	ENSCJAG00000020661	RBBP6	96	92.148	Callithrix_jacchus
MGP_PahariEiJ_G0013634	Rbbp6	93	92.296	ENSCAFG00000017566	RBBP6	98	86.541	Canis_familiaris
MGP_PahariEiJ_G0013634	Rbbp6	94	87.213	ENSCHIG00000013732	RBBP6	62	82.305	Capra_hircus
MGP_PahariEiJ_G0013634	Rbbp6	94	88.632	ENSTSYG00000000822	RBBP6	96	95.843	Carlito_syrichta
MGP_PahariEiJ_G0013634	Rbbp6	91	83.392	ENSCAPG00000012399	RBBP6	97	83.378	Cavia_aperea
MGP_PahariEiJ_G0013634	Rbbp6	94	86.663	ENSCPOG00000040025	RBBP6	94	86.525	Cavia_porcellus
MGP_PahariEiJ_G0013634	Rbbp6	94	87.780	ENSCCAG00000023229	RBBP6	96	95.612	Cebus_capucinus
MGP_PahariEiJ_G0013634	Rbbp6	94	87.662	ENSCATG00000033601	RBBP6	96	95.612	Cercocebus_atys
MGP_PahariEiJ_G0013634	Rbbp6	94	86.307	ENSCLAG00000009872	RBBP6	94	86.170	Chinchilla_lanigera
MGP_PahariEiJ_G0013634	Rbbp6	94	87.603	ENSCSAG00000006609	RBBP6	94	87.648	Chlorocebus_sabaeus
MGP_PahariEiJ_G0013634	Rbbp6	63	94.785	ENSCHOG00000000278	RBBP6	63	94.761	Choloepus_hoffmanni
MGP_PahariEiJ_G0013634	Rbbp6	94	73.090	ENSCPBG00000001818	RBBP6	93	78.776	Chrysemys_picta_bellii
MGP_PahariEiJ_G0013634	Rbbp6	94	87.544	ENSCANG00000039613	RBBP6	96	96.305	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0013634	Rbbp6	94	92.904	ENSCGRG00001017193	Rbbp6	94	92.904	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0013634	Rbbp6	94	92.904	ENSCGRG00000011887	Rbbp6	94	92.904	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0013634	Rbbp6	94	87.655	ENSDNOG00000048802	RBBP6	94	87.655	Dasypus_novemcinctus
MGP_PahariEiJ_G0013634	Rbbp6	96	85.947	ENSDORG00000010285	Rbbp6	96	86.026	Dipodomys_ordii
MGP_PahariEiJ_G0013634	Rbbp6	94	88.514	ENSFCAG00000043694	RBBP6	96	94.919	Felis_catus
MGP_PahariEiJ_G0013634	Rbbp6	93	70.153	ENSFALG00000003750	RBBP6	94	70.132	Ficedula_albicollis
MGP_PahariEiJ_G0013634	Rbbp6	94	86.264	ENSFDAG00000013132	RBBP6	94	86.246	Fukomys_damarensis
MGP_PahariEiJ_G0013634	Rbbp6	97	72.533	ENSGALG00000006043	RBBP6	86	78.897	Gallus_gallus
MGP_PahariEiJ_G0013634	Rbbp6	94	72.973	ENSGAGG00000004371	RBBP6	93	79.541	Gopherus_agassizii
MGP_PahariEiJ_G0013634	Rbbp6	94	87.721	ENSGGOG00000007137	RBBP6	96	95.381	Gorilla_gorilla
MGP_PahariEiJ_G0013634	Rbbp6	94	85.892	ENSHGLG00000008327	RBBP6	94	85.697	Heterocephalus_glaber_female
MGP_PahariEiJ_G0013634	Rbbp6	96	81.761	ENSHGLG00100007773	RBBP6	85	85.599	Heterocephalus_glaber_male
MGP_PahariEiJ_G0013634	Rbbp6	93	85.662	ENSSTOG00000016006	RBBP6	94	88.239	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0013634	Rbbp6	94	86.458	ENSJJAG00000014549	Rbbp6	94	86.592	Jaculus_jaculus
MGP_PahariEiJ_G0013634	Rbbp6	93	58.570	ENSLACG00000012333	RBBP6	64	56.771	Latimeria_chalumnae
MGP_PahariEiJ_G0013634	Rbbp6	92	50.564	ENSLOCG00000005487	RBBP6	94	53.302	Lepisosteus_oculatus
MGP_PahariEiJ_G0013634	Rbbp6	94	87.301	ENSLAFG00000009528	RBBP6	94	87.301	Loxodonta_africana
MGP_PahariEiJ_G0013634	Rbbp6	94	87.603	ENSMFAG00000038627	RBBP6	96	95.843	Macaca_fascicularis
MGP_PahariEiJ_G0013634	Rbbp6	94	87.544	ENSMMUG00000015908	RBBP6	96	95.843	Macaca_mulatta
MGP_PahariEiJ_G0013634	Rbbp6	94	87.721	ENSMNEG00000033630	RBBP6	96	95.843	Macaca_nemestrina
MGP_PahariEiJ_G0013634	Rbbp6	94	87.721	ENSMLEG00000030073	RBBP6	96	95.843	Mandrillus_leucophaeus
MGP_PahariEiJ_G0013634	Rbbp6	95	70.581	ENSMGAG00000006423	RBBP6	94	71.627	Meleagris_gallopavo
MGP_PahariEiJ_G0013634	Rbbp6	94	88.336	ENSMICG00000008059	RBBP6	89	95.843	Microcebus_murinus
MGP_PahariEiJ_G0013634	Rbbp6	94	75.493	ENSMODG00000016318	-	94	75.380	Monodelphis_domestica
MGP_PahariEiJ_G0013634	Rbbp6	73	95.879	MGP_CAROLIEiJ_G0030424	-	100	97.403	Mus_caroli
MGP_PahariEiJ_G0013634	Rbbp6	100	96.371	ENSMUSG00000030779	Rbbp6	100	96.371	Mus_musculus
MGP_PahariEiJ_G0013634	Rbbp6	100	96.203	MGP_SPRETEiJ_G0031538	Rbbp6	100	96.203	Mus_spretus
MGP_PahariEiJ_G0013634	Rbbp6	94	85.588	ENSMLUG00000010601	-	94	85.588	Myotis_lucifugus
MGP_PahariEiJ_G0013634	Rbbp6	63	86.888	ENSNGAG00000002381	Rbbp6	62	86.442	Nannospalax_galili
MGP_PahariEiJ_G0013634	Rbbp6	92	95.135	ENSNLEG00000011896	RBBP6	97	95.135	Nomascus_leucogenys
MGP_PahariEiJ_G0013634	Rbbp6	88	77.848	ENSMEUG00000014491	RBBP6	88	77.690	Notamacropus_eugenii
MGP_PahariEiJ_G0013634	Rbbp6	58	97.175	ENSOPRG00000016272	RBBP6	59	97.076	Ochotona_princeps
MGP_PahariEiJ_G0013634	Rbbp6	94	74.515	ENSOANG00000007673	RBBP6	94	74.800	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0013634	Rbbp6	96	88.000	ENSOCUG00000004346	RBBP6	97	84.406	Oryctolagus_cuniculus
MGP_PahariEiJ_G0013634	Rbbp6	94	88.249	ENSOGAG00000026986	RBBP6	94	88.009	Otolemur_garnettii
MGP_PahariEiJ_G0013634	Rbbp6	94	85.521	ENSOARG00000017741	RBBP6	61	82.396	Ovis_aries
MGP_PahariEiJ_G0013634	Rbbp6	94	86.128	ENSPPAG00000023595	RBBP6	94	86.170	Pan_paniscus
MGP_PahariEiJ_G0013634	Rbbp6	94	88.455	ENSPPRG00000004074	RBBP6	96	94.688	Panthera_pardus
MGP_PahariEiJ_G0013634	Rbbp6	94	88.455	ENSPTIG00000010342	RBBP6	96	94.688	Panthera_tigris_altaica
MGP_PahariEiJ_G0013634	Rbbp6	94	87.898	ENSPTRG00000007897	RBBP6	96	95.612	Pan_troglodytes
MGP_PahariEiJ_G0013634	Rbbp6	94	87.839	ENSPANG00000019625	RBBP6	96	96.074	Papio_anubis
MGP_PahariEiJ_G0013634	Rbbp6	94	78.713	ENSPCIG00000014000	RBBP6	94	78.551	Phascolarctos_cinereus
MGP_PahariEiJ_G0013634	Rbbp6	94	87.410	ENSPPYG00000007201	RBBP6	94	87.455	Pongo_abelii
MGP_PahariEiJ_G0013634	Rbbp6	94	88.514	ENSPCOG00000021939	RBBP6	89	95.612	Propithecus_coquereli
MGP_PahariEiJ_G0013634	Rbbp6	63	90.744	ENSPVAG00000001110	RBBP6	85	89.002	Pteropus_vampyrus
MGP_PahariEiJ_G0013634	Rbbp6	100	94.757	ENSRNOG00000012806	Rbbp6	100	95.036	Rattus_norvegicus
MGP_PahariEiJ_G0013634	Rbbp6	98	89.351	ENSRBIG00000004517	RBBP6	99	90.476	Rhinopithecus_bieti
MGP_PahariEiJ_G0013634	Rbbp6	94	87.662	ENSRROG00000032092	RBBP6	96	95.843	Rhinopithecus_roxellana
MGP_PahariEiJ_G0013634	Rbbp6	94	87.426	ENSSBOG00000021666	RBBP6	96	92.148	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0013634	Rbbp6	94	79.658	ENSSHAG00000004727	-	94	79.611	Sarcophilus_harrisii
MGP_PahariEiJ_G0013634	Rbbp6	90	94.286	ENSSARG00000004977	RBBP6	94	83.592	Sorex_araneus
MGP_PahariEiJ_G0013634	Rbbp6	50	83.051	ENSSPUG00000010682	RBBP6	100	80.159	Sphenodon_punctatus
MGP_PahariEiJ_G0013634	Rbbp6	94	87.485	ENSSSCG00000007830	RBBP6	94	87.685	Sus_scrofa
MGP_PahariEiJ_G0013634	Rbbp6	95	69.879	ENSTGUG00000006185	RBBP6	94	70.511	Taeniopygia_guttata
MGP_PahariEiJ_G0013634	Rbbp6	94	85.529	ENSTTRG00000002696	RBBP6	94	85.487	Tursiops_truncatus
MGP_PahariEiJ_G0013634	Rbbp6	94	86.687	ENSUMAG00000008537	RBBP6	94	86.954	Ursus_maritimus
MGP_PahariEiJ_G0013634	Rbbp6	67	90.687	ENSVPAG00000006458	RBBP6	79	91.030	Vicugna_pacos
MGP_PahariEiJ_G0013634	Rbbp6	94	88.253	ENSVVUG00000005484	RBBP6	94	88.253	Vulpes_vulpes