EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0013660 (Gene tree)
Gene ID: 110329734
Gene Symbol: Atxn2l
Alias: A2D|A2LG|A2RP|A2lp
Full Name: ataxin 2 like
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 12026 bases
Position: chr1:95966553-95978578
Accession: 110329734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0018935	PAM2	PF07145.15	2.3e-05	1	1
MGP_PahariEiJ_P0018932	PAM2	PF07145.15	2.7e-05	1	1
MGP_PahariEiJ_P0018931	PAM2	PF07145.15	2.9e-05	1	1
MGP_PahariEiJ_P0018933	PAM2	PF07145.15	3e-05	1	1
MGP_PahariEiJ_P0018935	LsmAD	PF06741.13	2.4e-17	1	1
MGP_PahariEiJ_P0018932	LsmAD	PF06741.13	3.1e-17	1	1
MGP_PahariEiJ_P0018931	LsmAD	PF06741.13	3.3e-17	1	1
MGP_PahariEiJ_P0018933	LsmAD	PF06741.13	3.6e-17	1	1
MGP_PahariEiJ_P0018932	SM-ATX	PF14438.6	5.2e-19	1	1
MGP_PahariEiJ_P0018931	SM-ATX	PF14438.6	5.6e-19	1	1
MGP_PahariEiJ_P0018933	SM-ATX	PF14438.6	5.9e-19	1	1
MGP_PahariEiJ_P0018935	SM-ATX	PF14438.6	1.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0018934	-	503	-	MGP_PahariEiJ_P0018934	144 (aa)	-	UPI000719A3DF
MGP_PahariEiJ_T0018935	-	2746	-	MGP_PahariEiJ_P0018935	863 (aa)	-	-
MGP_PahariEiJ_T0018936	-	684	-	MGP_PahariEiJ_P0018936	219 (aa)	-	-
MGP_PahariEiJ_T0018931	-	3847	XM_021209605	MGP_PahariEiJ_P0018931	1049 (aa)	XP_021065264	UPI000A30E55C
MGP_PahariEiJ_T0018932	-	4017	XM_021209631	MGP_PahariEiJ_P0018932	994 (aa)	XP_021065290	UPI000A3131A1
MGP_PahariEiJ_T0018933	-	3887	XM_021209571	MGP_PahariEiJ_P0018933	1096 (aa)	XP_021065230	UPI000A3094A0

Gene Model

Click here to download MGP_PahariEiJ_G0013660's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0013660's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0013660	Atxn2l	69	37.025	MGP_PahariEiJ_G0024272	Atxn2	96	36.219

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0013660	Atxn2l	99	95.343	ENSG00000168488	ATXN2L	100	98.901	Homo_sapiens
MGP_PahariEiJ_G0013660	Atxn2l	66	60.886	ENSAPOG00000021412	-	96	42.459	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0013660	Atxn2l	51	43.539	ENSAPOG00000010103	atxn2l	98	41.948	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0013660	Atxn2l	99	93.921	ENSAMEG00000015502	ATXN2L	96	91.279	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0013660	Atxn2l	85	59.848	ENSACIG00000024435	atxn2l	99	40.577	Amphilophus_citrinellus
MGP_PahariEiJ_G0013660	Atxn2l	55	59.124	ENSAOCG00000002581	-	100	40.609	Amphiprion_ocellaris
MGP_PahariEiJ_G0013660	Atxn2l	55	65.556	ENSATEG00000019382	-	95	43.780	Anabas_testudineus
MGP_PahariEiJ_G0013660	Atxn2l	99	74.664	ENSACAG00000005425	ATXN2L	100	73.963	Anolis_carolinensis
MGP_PahariEiJ_G0013660	Atxn2l	99	95.012	ENSANAG00000026257	ATXN2L	98	94.898	Aotus_nancymaae
MGP_PahariEiJ_G0013660	Atxn2l	51	43.400	ENSACLG00000016900	atxn2l	95	39.596	Astatotilapia_calliptera
MGP_PahariEiJ_G0013660	Atxn2l	59	45.283	ENSAMXG00000003332	atxn2l	96	43.478	Astyanax_mexicanus
MGP_PahariEiJ_G0013660	Atxn2l	99	42.903	ENSAMXG00000020362	-	95	44.089	Astyanax_mexicanus
MGP_PahariEiJ_G0013660	Atxn2l	99	94.179	ENSBTAG00000032087	ATXN2L	98	94.161	Bos_taurus
MGP_PahariEiJ_G0013660	Atxn2l	99	95.343	ENSCJAG00000006251	ATXN2L	98	94.439	Callithrix_jacchus
MGP_PahariEiJ_G0013660	Atxn2l	99	93.844	ENSCAFG00000017174	ATXN2L	98	93.710	Canis_familiaris
MGP_PahariEiJ_G0013660	Atxn2l	99	93.844	ENSCAFG00020017576	ATXN2L	98	92.940	Canis_lupus_dingo
MGP_PahariEiJ_G0013660	Atxn2l	99	94.063	ENSCHIG00000009907	ATXN2L	98	93.411	Capra_hircus
MGP_PahariEiJ_G0013660	Atxn2l	99	95.592	ENSTSYG00000013854	ATXN2L	97	95.476	Carlito_syrichta
MGP_PahariEiJ_G0013660	Atxn2l	100	93.634	ENSCPOG00000010521	ATXN2L	100	94.097	Cavia_porcellus
MGP_PahariEiJ_G0013660	Atxn2l	99	95.040	ENSCCAG00000033928	ATXN2L	100	94.693	Cebus_capucinus
MGP_PahariEiJ_G0013660	Atxn2l	99	94.529	ENSCATG00000021354	ATXN2L	99	95.050	Cercocebus_atys
MGP_PahariEiJ_G0013660	Atxn2l	100	93.287	ENSCLAG00000016117	ATXN2L	100	94.294	Chinchilla_lanigera
MGP_PahariEiJ_G0013660	Atxn2l	99	94.645	ENSCSAG00000006306	ATXN2L	96	94.549	Chlorocebus_sabaeus
MGP_PahariEiJ_G0013660	Atxn2l	96	73.815	ENSCPBG00000003859	ATXN2L	86	72.749	Chrysemys_picta_bellii
MGP_PahariEiJ_G0013660	Atxn2l	99	91.269	ENSCANG00000043625	ATXN2L	100	92.192	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0013660	Atxn2l	100	97.988	ENSCGRG00001017114	Atxn2l	100	97.988	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0013660	Atxn2l	100	97.914	ENSCGRG00000001500	Atxn2l	100	97.914	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0013660	Atxn2l	99	42.430	ENSDARG00000011597	atxn2l	96	41.993	Danio_rerio
MGP_PahariEiJ_G0013660	Atxn2l	99	94.063	ENSDNOG00000009821	ATXN2L	80	93.274	Dasypus_novemcinctus
MGP_PahariEiJ_G0013660	Atxn2l	86	85.113	ENSETEG00000012782	ATXN2L	88	80.152	Echinops_telfairi
MGP_PahariEiJ_G0013660	Atxn2l	100	93.764	ENSEASG00005014992	ATXN2L	99	94.073	Equus_asinus_asinus
MGP_PahariEiJ_G0013660	Atxn2l	99	93.597	ENSECAG00000007301	ATXN2L	98	93.023	Equus_caballus
MGP_PahariEiJ_G0013660	Atxn2l	96	91.404	ENSEEUG00000008940	ATXN2L	100	92.691	Erinaceus_europaeus
MGP_PahariEiJ_G0013660	Atxn2l	99	41.448	ENSELUG00000023740	atxn2l	99	42.085	Esox_lucius
MGP_PahariEiJ_G0013660	Atxn2l	70	65.480	ENSELUG00000022915	-	78	61.812	Esox_lucius
MGP_PahariEiJ_G0013660	Atxn2l	99	94.884	ENSFCAG00000027807	ATXN2L	98	94.161	Felis_catus
MGP_PahariEiJ_G0013660	Atxn2l	94	83.547	ENSFDAG00000020667	ATXN2L	98	80.632	Fukomys_damarensis
MGP_PahariEiJ_G0013660	Atxn2l	88	63.306	ENSGMOG00000006016	-	96	43.260	Gadus_morhua
MGP_PahariEiJ_G0013660	Atxn2l	63	63.281	ENSGACG00000007446	-	87	48.016	Gasterosteus_aculeatus
MGP_PahariEiJ_G0013660	Atxn2l	99	75.489	ENSGAGG00000006078	ATXN2L	95	76.000	Gopherus_agassizii
MGP_PahariEiJ_G0013660	Atxn2l	100	74.335	ENSGGOG00000036669	-	98	74.486	Gorilla_gorilla
MGP_PahariEiJ_G0013660	Atxn2l	99	94.084	ENSGGOG00000014112	ATXN2L	99	93.983	Gorilla_gorilla
MGP_PahariEiJ_G0013660	Atxn2l	68	62.681	ENSHBUG00000007997	-	86	63.889	Haplochromis_burtoni
MGP_PahariEiJ_G0013660	Atxn2l	99	39.894	ENSHBUG00000013425	atxn2l	98	40.971	Haplochromis_burtoni
MGP_PahariEiJ_G0013660	Atxn2l	99	92.433	ENSHGLG00000010957	ATXN2L	98	93.587	Heterocephalus_glaber_female
MGP_PahariEiJ_G0013660	Atxn2l	99	88.721	ENSHGLG00100000705	ATXN2L	100	90.390	Heterocephalus_glaber_male
MGP_PahariEiJ_G0013660	Atxn2l	99	43.882	ENSIPUG00000001761	atxn2l	96	44.360	Ictalurus_punctatus
MGP_PahariEiJ_G0013660	Atxn2l	90	94.487	ENSSTOG00000011807	ATXN2L	100	94.359	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0013660	Atxn2l	100	95.052	ENSJJAG00000005629	Atxn2l	100	95.167	Jaculus_jaculus
MGP_PahariEiJ_G0013660	Atxn2l	90	63.878	ENSKMAG00000021450	-	99	43.511	Kryptolebias_marmoratus
MGP_PahariEiJ_G0013660	Atxn2l	63	62.452	ENSLBEG00000022720	-	95	40.871	Labrus_bergylta
MGP_PahariEiJ_G0013660	Atxn2l	74	51.087	ENSLBEG00000006525	atxn2l	78	49.114	Labrus_bergylta
MGP_PahariEiJ_G0013660	Atxn2l	99	64.245	ENSLACG00000006023	ATXN2L	100	62.032	Latimeria_chalumnae
MGP_PahariEiJ_G0013660	Atxn2l	99	93.968	ENSLAFG00000018143	ATXN2L	99	93.480	Loxodonta_africana
MGP_PahariEiJ_G0013660	Atxn2l	99	94.645	ENSMFAG00000030590	ATXN2L	98	94.167	Macaca_fascicularis
MGP_PahariEiJ_G0013660	Atxn2l	99	94.645	ENSMMUG00000003298	ATXN2L	98	94.167	Macaca_mulatta
MGP_PahariEiJ_G0013660	Atxn2l	99	94.645	ENSMNEG00000032716	ATXN2L	98	94.167	Macaca_nemestrina
MGP_PahariEiJ_G0013660	Atxn2l	99	94.645	ENSMLEG00000034087	ATXN2L	100	95.596	Mandrillus_leucophaeus
MGP_PahariEiJ_G0013660	Atxn2l	99	42.279	ENSMAMG00000013005	-	99	41.994	Mastacembelus_armatus
MGP_PahariEiJ_G0013660	Atxn2l	99	38.747	ENSMZEG00005001258	atxn2l	94	40.172	Maylandia_zebra
MGP_PahariEiJ_G0013660	Atxn2l	100	97.536	ENSMAUG00000011753	Atxn2l	100	97.536	Mesocricetus_auratus
MGP_PahariEiJ_G0013660	Atxn2l	99	94.432	ENSMICG00000010608	ATXN2L	97	94.316	Microcebus_murinus
MGP_PahariEiJ_G0013660	Atxn2l	100	98.390	ENSMOCG00000020882	Atxn2l	100	98.390	Microtus_ochrogaster
MGP_PahariEiJ_G0013660	Atxn2l	92	39.960	ENSMMOG00000001440	-	98	40.538	Mola_mola
MGP_PahariEiJ_G0013660	Atxn2l	99	87.371	ENSMODG00000015570	ATXN2L	98	85.427	Monodelphis_domestica
MGP_PahariEiJ_G0013660	Atxn2l	100	99.305	MGP_CAROLIEiJ_G0030450	Atxn2l	100	99.305	Mus_caroli
MGP_PahariEiJ_G0013660	Atxn2l	100	99.296	ENSMUSG00000032637	Atxn2l	100	99.296	Mus_musculus
MGP_PahariEiJ_G0013660	Atxn2l	100	99.296	MGP_SPRETEiJ_G0031564	Atxn2l	100	99.296	Mus_spretus
MGP_PahariEiJ_G0013660	Atxn2l	99	91.744	ENSMPUG00000012807	ATXN2L	100	91.944	Mustela_putorius_furo
MGP_PahariEiJ_G0013660	Atxn2l	99	93.830	ENSMLUG00000009877	ATXN2L	95	93.392	Myotis_lucifugus
MGP_PahariEiJ_G0013660	Atxn2l	100	96.756	ENSNGAG00000021446	Atxn2l	100	96.756	Nannospalax_galili
MGP_PahariEiJ_G0013660	Atxn2l	83	38.065	ENSNBRG00000020833	-	94	40.488	Neolamprologus_brichardi
MGP_PahariEiJ_G0013660	Atxn2l	100	69.560	ENSNLEG00000033414	-	98	68.150	Nomascus_leucogenys
MGP_PahariEiJ_G0013660	Atxn2l	99	94.664	ENSNLEG00000011004	ATXN2L	99	93.857	Nomascus_leucogenys
MGP_PahariEiJ_G0013660	Atxn2l	99	84.954	ENSMEUG00000011098	ATXN2L	96	82.827	Notamacropus_eugenii
MGP_PahariEiJ_G0013660	Atxn2l	99	89.173	ENSOPRG00000002270	-	100	91.091	Ochotona_princeps
MGP_PahariEiJ_G0013660	Atxn2l	99	42.158	ENSONIG00000009388	atxn2l	100	43.060	Oreochromis_niloticus
MGP_PahariEiJ_G0013660	Atxn2l	98	72.841	ENSOANG00000013115	ATXN2L	91	77.547	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0013660	Atxn2l	99	94.179	ENSOCUG00000002677	ATXN2L	99	94.719	Oryctolagus_cuniculus
MGP_PahariEiJ_G0013660	Atxn2l	99	42.336	ENSORLG00015014174	-	96	41.981	Oryzias_latipes_hsok
MGP_PahariEiJ_G0013660	Atxn2l	68	37.013	ENSOMEG00000021118	-	96	42.344	Oryzias_melastigma
MGP_PahariEiJ_G0013660	Atxn2l	99	94.412	ENSOGAG00000012596	ATXN2L	98	93.900	Otolemur_garnettii
MGP_PahariEiJ_G0013660	Atxn2l	99	93.140	ENSOARG00000002503	ATXN2L	100	93.182	Ovis_aries
MGP_PahariEiJ_G0013660	Atxn2l	99	74.419	ENSPPAG00000036236	-	98	73.564	Pan_paniscus
MGP_PahariEiJ_G0013660	Atxn2l	100	94.676	ENSPPAG00000039107	ATXN2L	100	94.624	Pan_paniscus
MGP_PahariEiJ_G0013660	Atxn2l	99	94.767	ENSPPRG00000013690	ATXN2L	98	94.069	Panthera_pardus
MGP_PahariEiJ_G0013660	Atxn2l	99	94.651	ENSPTIG00000015041	ATXN2L	94	94.356	Panthera_tigris_altaica
MGP_PahariEiJ_G0013660	Atxn2l	99	94.645	ENSPTRG00000007938	ATXN2L	99	93.983	Pan_troglodytes
MGP_PahariEiJ_G0013660	Atxn2l	99	93.287	ENSPANG00000018770	ATXN2L	98	92.159	Papio_anubis
MGP_PahariEiJ_G0013660	Atxn2l	93	66.406	ENSPKIG00000018462	-	99	43.703	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0013660	Atxn2l	99	73.918	ENSPSIG00000004866	ATXN2L	100	74.842	Pelodiscus_sinensis
MGP_PahariEiJ_G0013660	Atxn2l	67	60.938	ENSPMGG00000014821	-	94	54.795	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0013660	Atxn2l	100	97.988	ENSPEMG00000019231	Atxn2l	100	97.988	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0013660	Atxn2l	99	87.731	ENSPCIG00000025207	ATXN2L	98	85.714	Phascolarctos_cinereus
MGP_PahariEiJ_G0013660	Atxn2l	57	63.137	ENSPFOG00000005935	-	98	40.814	Poecilia_formosa
MGP_PahariEiJ_G0013660	Atxn2l	57	61.961	ENSPLAG00000017094	-	84	63.296	Poecilia_latipinna
MGP_PahariEiJ_G0013660	Atxn2l	57	63.137	ENSPMEG00000017227	-	99	41.770	Poecilia_mexicana
MGP_PahariEiJ_G0013660	Atxn2l	57	63.137	ENSPREG00000023090	-	97	42.165	Poecilia_reticulata
MGP_PahariEiJ_G0013660	Atxn2l	99	94.529	ENSPPYG00000025917	ATXN2L	98	93.689	Pongo_abelii
MGP_PahariEiJ_G0013660	Atxn2l	99	75.581	ENSPPYG00000017765	-	96	75.699	Pongo_abelii
MGP_PahariEiJ_G0013660	Atxn2l	62	100.000	ENSPCAG00000015179	ATXN2L	64	100.000	Procavia_capensis
MGP_PahariEiJ_G0013660	Atxn2l	99	94.761	ENSPCOG00000024791	ATXN2L	98	94.069	Propithecus_coquereli
MGP_PahariEiJ_G0013660	Atxn2l	98	86.085	ENSPVAG00000003958	ATXN2L	98	86.191	Pteropus_vampyrus
MGP_PahariEiJ_G0013660	Atxn2l	67	62.406	ENSPNYG00000012482	atxn2l	94	48.060	Pundamilia_nyererei
MGP_PahariEiJ_G0013660	Atxn2l	99	44.701	ENSPNAG00000014538	atxn2l	99	44.933	Pygocentrus_nattereri
MGP_PahariEiJ_G0013660	Atxn2l	78	65.891	ENSPNAG00000023685	-	95	42.366	Pygocentrus_nattereri
MGP_PahariEiJ_G0013660	Atxn2l	100	97.798	ENSRNOG00000018686	Atxn2l	100	96.624	Rattus_norvegicus
MGP_PahariEiJ_G0013660	Atxn2l	99	83.602	ENSRBIG00000036712	ATXN2L	99	83.501	Rhinopithecus_bieti
MGP_PahariEiJ_G0013660	Atxn2l	99	94.919	ENSRROG00000028547	ATXN2L	98	94.817	Rhinopithecus_roxellana
MGP_PahariEiJ_G0013660	Atxn2l	99	94.761	ENSSBOG00000025782	ATXN2L	100	95.745	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0013660	Atxn2l	99	87.847	ENSSHAG00000012015	ATXN2L	98	88.061	Sarcophilus_harrisii
MGP_PahariEiJ_G0013660	Atxn2l	99	43.370	ENSSFOG00015001018	atxn2l	98	42.080	Scleropages_formosus
MGP_PahariEiJ_G0013660	Atxn2l	60	62.868	ENSSMAG00000016932	-	95	42.362	Scophthalmus_maximus
MGP_PahariEiJ_G0013660	Atxn2l	91	39.716	ENSSMAG00000016365	atxn2l	97	41.961	Scophthalmus_maximus
MGP_PahariEiJ_G0013660	Atxn2l	54	62.082	ENSSLDG00000017701	-	86	45.383	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0013660	Atxn2l	98	92.588	ENSSARG00000009732	ATXN2L	100	93.698	Sorex_araneus
MGP_PahariEiJ_G0013660	Atxn2l	99	75.593	ENSSPUG00000016297	ATXN2L	94	76.837	Sphenodon_punctatus
MGP_PahariEiJ_G0013660	Atxn2l	62	62.362	ENSSPAG00000008174	-	95	42.308	Stegastes_partitus
MGP_PahariEiJ_G0013660	Atxn2l	99	93.714	ENSSSCG00000021845	ATXN2L	100	93.861	Sus_scrofa
MGP_PahariEiJ_G0013660	Atxn2l	62	63.529	ENSTRUG00000007132	-	95	43.875	Takifugu_rubripes
MGP_PahariEiJ_G0013660	Atxn2l	91	63.566	ENSTNIG00000018942	-	96	42.352	Tetraodon_nigroviridis
MGP_PahariEiJ_G0013660	Atxn2l	64	94.681	ENSTBEG00000014435	-	64	93.617	Tupaia_belangeri
MGP_PahariEiJ_G0013660	Atxn2l	98	90.529	ENSTTRG00000005913	ATXN2L	98	90.715	Tursiops_truncatus
MGP_PahariEiJ_G0013660	Atxn2l	99	93.721	ENSUAMG00000001462	ATXN2L	98	93.030	Ursus_americanus
MGP_PahariEiJ_G0013660	Atxn2l	100	91.003	ENSUMAG00000009437	ATXN2L	100	91.812	Ursus_maritimus
MGP_PahariEiJ_G0013660	Atxn2l	58	97.537	ENSVPAG00000009539	-	63	97.537	Vicugna_pacos
MGP_PahariEiJ_G0013660	Atxn2l	100	94.124	ENSVVUG00000024239	ATXN2L	100	94.099	Vulpes_vulpes
MGP_PahariEiJ_G0013660	Atxn2l	99	60.850	ENSXETG00000014990	atxn2l	96	60.243	Xenopus_tropicalis
MGP_PahariEiJ_G0013660	Atxn2l	70	62.745	ENSXCOG00000001128	-	80	62.745	Xiphophorus_couchianus
MGP_PahariEiJ_G0013660	Atxn2l	75	62.403	ENSXMAG00000010133	-	97	42.600	Xiphophorus_maculatus