EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0013661 (Gene tree)
Gene ID: 110312776
Gene Symbol: Eif3c
Alias: 110kDa|3230401O13Rik|Eif3s8|NIPIL(A3)|Xs|Xsl
Full Name: eukaryotic translation initiation factor 3 subunit C
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 18118 bases
Position: chr1:96017228-96035345
Accession: 110312776
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0018937	eIF-3c_N	PF05470.12	5.3e-266	1	1
MGP_PahariEiJ_P0018938	eIF-3c_N	PF05470.12	8.5e-70	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0018937	-	3369	-	MGP_PahariEiJ_P0018937	911 (aa)	XP_021042311	UPI000A309FA0
MGP_PahariEiJ_T0018938	-	926	-	MGP_PahariEiJ_P0018938	249 (aa)	-	-
MGP_PahariEiJ_T0018939	-	480	-	MGP_PahariEiJ_P0018939	66 (aa)	-	UPI000719A207

Gene Model

Click here to download MGP_PahariEiJ_G0013661's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0013661's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0013661	Eif3c	100	96.171	ENSG00000205609	EIF3CL	100	96.171	Homo_sapiens
MGP_PahariEiJ_G0013661	Eif3c	100	96.276	ENSG00000184110	EIF3C	100	100.000	Homo_sapiens
MGP_PahariEiJ_G0013661	Eif3c	99	75.490	ENSAPOG00000024092	eif3c	92	82.871	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0013661	Eif3c	100	96.824	ENSAMEG00000015454	-	100	96.824	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0013661	Eif3c	99	72.657	ENSACIG00000015082	eif3c	93	82.558	Amphilophus_citrinellus
MGP_PahariEiJ_G0013661	Eif3c	67	61.538	ENSAOCG00000024752	-	55	66.883	Amphiprion_ocellaris
MGP_PahariEiJ_G0013661	Eif3c	94	82.673	ENSAOCG00000021466	eif3c	98	75.599	Amphiprion_ocellaris
MGP_PahariEiJ_G0013661	Eif3c	94	82.673	ENSAPEG00000010521	eif3c	98	75.599	Amphiprion_percula
MGP_PahariEiJ_G0013661	Eif3c	61	65.584	ENSAPEG00000023503	-	62	68.182	Amphiprion_percula
MGP_PahariEiJ_G0013661	Eif3c	99	74.973	ENSATEG00000019001	eif3c	98	74.973	Anabas_testudineus
MGP_PahariEiJ_G0013661	Eif3c	100	85.044	ENSACAG00000005937	-	100	84.825	Anolis_carolinensis
MGP_PahariEiJ_G0013661	Eif3c	100	96.166	ENSANAG00000020640	-	100	96.166	Aotus_nancymaae
MGP_PahariEiJ_G0013661	Eif3c	84	79.479	ENSACLG00000009322	eif3c	92	79.479	Astatotilapia_calliptera
MGP_PahariEiJ_G0013661	Eif3c	84	82.314	ENSACLG00000009347	eif3c	90	82.314	Astatotilapia_calliptera
MGP_PahariEiJ_G0013661	Eif3c	99	75.055	ENSAMXG00000020949	eif3c	98	74.754	Astyanax_mexicanus
MGP_PahariEiJ_G0013661	Eif3c	100	95.504	ENSBTAG00000006543	EIF3CL	100	95.504	Bos_taurus
MGP_PahariEiJ_G0013661	Eif3c	99	42.134	WBGene00001226	eif-3.C	66	46.104	Caenorhabditis_elegans
MGP_PahariEiJ_G0013661	Eif3c	100	96.057	ENSCJAG00000006341	-	100	96.057	Callithrix_jacchus
MGP_PahariEiJ_G0013661	Eif3c	100	96.605	ENSCAFG00000017143	-	100	96.605	Canis_familiaris
MGP_PahariEiJ_G0013661	Eif3c	100	96.714	ENSCAFG00020017587	-	100	96.714	Canis_lupus_dingo
MGP_PahariEiJ_G0013661	Eif3c	100	95.504	ENSCHIG00000024795	-	100	95.504	Capra_hircus
MGP_PahariEiJ_G0013661	Eif3c	100	95.619	ENSTSYG00000003486	-	100	95.619	Carlito_syrichta
MGP_PahariEiJ_G0013661	Eif3c	96	86.297	ENSCAPG00000015887	-	100	87.542	Cavia_aperea
MGP_PahariEiJ_G0013661	Eif3c	100	96.824	ENSCPOG00000007533	-	100	96.824	Cavia_porcellus
MGP_PahariEiJ_G0013661	Eif3c	99	81.477	ENSCCAG00000029099	-	99	80.066	Cebus_capucinus
MGP_PahariEiJ_G0013661	Eif3c	100	95.455	ENSCCAG00000034928	-	100	95.455	Cebus_capucinus
MGP_PahariEiJ_G0013661	Eif3c	100	90.581	ENSCCAG00000027724	-	100	89.814	Cebus_capucinus
MGP_PahariEiJ_G0013661	Eif3c	100	96.166	ENSCATG00000032673	-	100	96.166	Cercocebus_atys
MGP_PahariEiJ_G0013661	Eif3c	100	95.838	ENSCLAG00000011094	-	100	95.947	Chinchilla_lanigera
MGP_PahariEiJ_G0013661	Eif3c	100	96.166	ENSCSAG00000006297	-	100	96.166	Chlorocebus_sabaeus
MGP_PahariEiJ_G0013661	Eif3c	55	79.537	ENSCHOG00000003120	-	88	79.537	Choloepus_hoffmanni
MGP_PahariEiJ_G0013661	Eif3c	80	74.667	ENSCPBG00000012407	-	94	77.735	Chrysemys_picta_bellii
MGP_PahariEiJ_G0013661	Eif3c	79	55.137	ENSCSAVG00000006744	-	90	57.391	Ciona_savignyi
MGP_PahariEiJ_G0013661	Eif3c	100	96.166	ENSCANG00000033626	-	100	96.166	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0013661	Eif3c	100	97.697	ENSCGRG00001015265	EIF3C	100	97.697	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0013661	Eif3c	100	92.000	ENSCGRG00000006124	-	100	92.000	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0013661	Eif3c	100	73.224	ENSCSEG00000017770	eif3c	100	73.115	Cynoglossus_semilaevis
MGP_PahariEiJ_G0013661	Eif3c	99	74.482	ENSCVAG00000005402	eif3c	98	74.918	Cyprinodon_variegatus
MGP_PahariEiJ_G0013661	Eif3c	99	74.345	ENSDARG00000016443	eif3c	98	74.292	Danio_rerio
MGP_PahariEiJ_G0013661	Eif3c	100	95.947	ENSDNOG00000031497	-	100	95.947	Dasypus_novemcinctus
MGP_PahariEiJ_G0013661	Eif3c	100	96.714	ENSDORG00000016471	Eif3c	100	96.714	Dipodomys_ordii
MGP_PahariEiJ_G0013661	Eif3c	66	56.198	FBgn0034258	eIF3c	63	56.271	Drosophila_melanogaster
MGP_PahariEiJ_G0013661	Eif3c	92	98.165	ENSETEG00000013527	-	92	98.165	Echinops_telfairi
MGP_PahariEiJ_G0013661	Eif3c	99	62.513	ENSEBUG00000001629	eif3c	99	62.675	Eptatretus_burgeri
MGP_PahariEiJ_G0013661	Eif3c	100	96.605	ENSECAG00000008746	-	100	96.605	Equus_caballus
MGP_PahariEiJ_G0013661	Eif3c	65	63.265	ENSEEUG00000000726	-	64	63.265	Erinaceus_europaeus
MGP_PahariEiJ_G0013661	Eif3c	87	95.238	ENSEEUG00000006148	-	100	95.238	Erinaceus_europaeus
MGP_PahariEiJ_G0013661	Eif3c	99	73.747	ENSELUG00000022257	eif3c	92	81.758	Esox_lucius
MGP_PahariEiJ_G0013661	Eif3c	100	96.495	ENSFCAG00000015782	-	100	96.495	Felis_catus
MGP_PahariEiJ_G0013661	Eif3c	100	96.386	ENSFDAG00000003588	-	100	96.386	Fukomys_damarensis
MGP_PahariEiJ_G0013661	Eif3c	100	73.823	ENSFHEG00000014154	EIF3C	98	74.783	Fundulus_heteroclitus
MGP_PahariEiJ_G0013661	Eif3c	97	73.064	ENSGMOG00000016885	eif3c	99	74.324	Gadus_morhua
MGP_PahariEiJ_G0013661	Eif3c	59	82.051	ENSGALG00000047139	-	65	84.694	Gallus_gallus
MGP_PahariEiJ_G0013661	Eif3c	96	75.142	ENSGACG00000007652	eif3c	100	74.672	Gasterosteus_aculeatus
MGP_PahariEiJ_G0013661	Eif3c	92	82.033	ENSGAGG00000006666	-	100	81.442	Gopherus_agassizii
MGP_PahariEiJ_G0013661	Eif3c	99	93.626	ENSGGOG00000026919	EIF3C	100	96.132	Gorilla_gorilla
MGP_PahariEiJ_G0013661	Eif3c	72	95.580	ENSGGOG00000022677	-	100	94.595	Gorilla_gorilla
MGP_PahariEiJ_G0013661	Eif3c	100	96.386	ENSHGLG00000011445	EIF3C	100	96.386	Heterocephalus_glaber_female
MGP_PahariEiJ_G0013661	Eif3c	100	96.386	ENSHGLG00100000217	EIF3C	100	96.386	Heterocephalus_glaber_male
MGP_PahariEiJ_G0013661	Eif3c	99	74.783	ENSHCOG00000019694	eif3c	98	74.782	Hippocampus_comes
MGP_PahariEiJ_G0013661	Eif3c	99	74.457	ENSIPUG00000016878	eif3c	98	75.272	Ictalurus_punctatus
MGP_PahariEiJ_G0013661	Eif3c	100	96.605	ENSSTOG00000021278	-	100	96.605	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0013661	Eif3c	100	96.276	ENSJJAG00000012722	Eif3c	100	96.276	Jaculus_jaculus
MGP_PahariEiJ_G0013661	Eif3c	99	75.386	ENSKMAG00000021662	eif3c	97	74.022	Kryptolebias_marmoratus
MGP_PahariEiJ_G0013661	Eif3c	99	74.115	ENSLBEG00000023370	eif3c	99	73.110	Labrus_bergylta
MGP_PahariEiJ_G0013661	Eif3c	100	77.293	ENSLACG00000000770	eif3c	100	79.062	Latimeria_chalumnae
MGP_PahariEiJ_G0013661	Eif3c	100	95.400	ENSLAFG00000027426	-	100	95.400	Loxodonta_africana
MGP_PahariEiJ_G0013661	Eif3c	100	96.166	ENSMFAG00000041930	-	100	96.166	Macaca_fascicularis
MGP_PahariEiJ_G0013661	Eif3c	100	96.166	ENSMMUG00000011798	-	100	96.166	Macaca_mulatta
MGP_PahariEiJ_G0013661	Eif3c	100	96.166	ENSMNEG00000023915	-	100	96.166	Macaca_nemestrina
MGP_PahariEiJ_G0013661	Eif3c	100	96.166	ENSMLEG00000027529	-	100	96.166	Mandrillus_leucophaeus
MGP_PahariEiJ_G0013661	Eif3c	99	77.198	ENSMAMG00000012512	eif3c	95	83.167	Mastacembelus_armatus
MGP_PahariEiJ_G0013661	Eif3c	99	71.192	ENSMZEG00005013699	eif3c	99	71.996	Maylandia_zebra
MGP_PahariEiJ_G0013661	Eif3c	84	79.642	ENSMZEG00005013685	eif3c	92	79.642	Maylandia_zebra
MGP_PahariEiJ_G0013661	Eif3c	100	97.807	ENSMAUG00000010621	Eif3c	100	97.807	Mesocricetus_auratus
MGP_PahariEiJ_G0013661	Eif3c	100	96.276	ENSMICG00000036748	-	100	96.276	Microcebus_murinus
MGP_PahariEiJ_G0013661	Eif3c	100	95.504	ENSMOCG00000004204	Eif3c	100	95.614	Microtus_ochrogaster
MGP_PahariEiJ_G0013661	Eif3c	100	70.833	ENSMMOG00000001572	eif3c	94	81.518	Mola_mola
MGP_PahariEiJ_G0013661	Eif3c	100	92.998	ENSMODG00000015579	-	100	92.998	Monodelphis_domestica
MGP_PahariEiJ_G0013661	Eif3c	84	83.085	ENSMALG00000008907	eif3c	92	82.947	Monopterus_albus
MGP_PahariEiJ_G0013661	Eif3c	100	100.000	MGP_CAROLIEiJ_G0030451	Eif3c	100	100.000	Mus_caroli
MGP_PahariEiJ_G0013661	Eif3c	100	100.000	ENSMUSG00000030738	Eif3c	100	100.000	Mus_musculus
MGP_PahariEiJ_G0013661	Eif3c	100	100.000	MGP_SPRETEiJ_G0031565	Eif3c	100	100.000	Mus_spretus
MGP_PahariEiJ_G0013661	Eif3c	96	96.136	ENSMPUG00000012732	-	100	96.136	Mustela_putorius_furo
MGP_PahariEiJ_G0013661	Eif3c	100	95.290	ENSMLUG00000015558	-	100	95.290	Myotis_lucifugus
MGP_PahariEiJ_G0013661	Eif3c	93	89.091	ENSNGAG00000010901	-	98	89.091	Nannospalax_galili
MGP_PahariEiJ_G0013661	Eif3c	100	97.262	ENSNGAG00000007177	-	100	97.262	Nannospalax_galili
MGP_PahariEiJ_G0013661	Eif3c	100	95.455	ENSNLEG00000001425	-	100	95.455	Nomascus_leucogenys
MGP_PahariEiJ_G0013661	Eif3c	89	60.897	ENSMEUG00000005317	-	100	58.333	Notamacropus_eugenii
MGP_PahariEiJ_G0013661	Eif3c	100	75.628	ENSMEUG00000009939	-	99	76.092	Notamacropus_eugenii
MGP_PahariEiJ_G0013661	Eif3c	100	95.728	ENSOPRG00000000931	-	100	95.838	Ochotona_princeps
MGP_PahariEiJ_G0013661	Eif3c	100	96.386	ENSODEG00000013508	-	100	96.386	Octodon_degus
MGP_PahariEiJ_G0013661	Eif3c	66	62.541	ENSONIG00000011434	eif3c	99	62.541	Oreochromis_niloticus
MGP_PahariEiJ_G0013661	Eif3c	100	88.793	ENSOANG00000011410	-	100	89.547	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0013661	Eif3c	100	96.386	ENSOCUG00000022489	-	100	96.386	Oryctolagus_cuniculus
MGP_PahariEiJ_G0013661	Eif3c	99	73.947	ENSORLG00000006318	eif3c	95	73.246	Oryzias_latipes
MGP_PahariEiJ_G0013661	Eif3c	99	73.947	ENSORLG00020015713	eif3c	91	81.356	Oryzias_latipes_hni
MGP_PahariEiJ_G0013661	Eif3c	99	73.836	ENSORLG00015013772	eif3c	97	73.289	Oryzias_latipes_hsok
MGP_PahariEiJ_G0013661	Eif3c	100	74.030	ENSOMEG00000020450	eif3c	100	73.599	Oryzias_melastigma
MGP_PahariEiJ_G0013661	Eif3c	100	95.728	ENSOGAG00000012737	-	100	95.728	Otolemur_garnettii
MGP_PahariEiJ_G0013661	Eif3c	100	95.504	ENSOARG00000002892	-	100	95.504	Ovis_aries
MGP_PahariEiJ_G0013661	Eif3c	100	96.495	ENSPPRG00000012336	-	100	96.495	Panthera_pardus
MGP_PahariEiJ_G0013661	Eif3c	100	96.495	ENSPTIG00000011712	-	100	96.495	Panthera_tigris_altaica
MGP_PahariEiJ_G0013661	Eif3c	100	96.166	ENSPANG00000021151	-	100	96.166	Papio_anubis
MGP_PahariEiJ_G0013661	Eif3c	99	74.510	ENSPKIG00000002049	eif3c	98	74.074	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0013661	Eif3c	89	83.250	ENSPMGG00000005409	eif3c	94	83.250	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0013661	Eif3c	100	96.179	ENSPEMG00000010899	Eif3c	100	96.179	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0013661	Eif3c	100	92.341	ENSPCIG00000025206	-	100	93.107	Phascolarctos_cinereus
MGP_PahariEiJ_G0013661	Eif3c	99	74.348	ENSPFOG00000004476	eif3c	98	73.885	Poecilia_formosa
MGP_PahariEiJ_G0013661	Eif3c	100	70.833	ENSPLAG00000017480	eif3c	98	73.852	Poecilia_latipinna
MGP_PahariEiJ_G0013661	Eif3c	99	74.973	ENSPMEG00000019512	eif3c	98	74.074	Poecilia_mexicana
MGP_PahariEiJ_G0013661	Eif3c	100	92.881	ENSPPYG00000007227	-	100	92.881	Pongo_abelii
MGP_PahariEiJ_G0013661	Eif3c	66	96.672	ENSPCAG00000012710	-	100	96.672	Procavia_capensis
MGP_PahariEiJ_G0013661	Eif3c	100	96.386	ENSPCOG00000019289	-	100	96.386	Propithecus_coquereli
MGP_PahariEiJ_G0013661	Eif3c	100	96.276	ENSPVAG00000005804	-	100	96.276	Pteropus_vampyrus
MGP_PahariEiJ_G0013661	Eif3c	86	52.632	ENSPNYG00000016530	eif3c	81	79.394	Pundamilia_nyererei
MGP_PahariEiJ_G0013661	Eif3c	99	75.164	ENSPNAG00000024040	eif3c	99	75.410	Pygocentrus_nattereri
MGP_PahariEiJ_G0013661	Eif3c	100	98.902	ENSRNOG00000018761	Eif3c	100	98.902	Rattus_norvegicus
MGP_PahariEiJ_G0013661	Eif3c	100	95.455	ENSRBIG00000044009	-	100	95.455	Rhinopithecus_bieti
MGP_PahariEiJ_G0013661	Eif3c	100	96.166	ENSRROG00000043626	-	100	96.166	Rhinopithecus_roxellana
MGP_PahariEiJ_G0013661	Eif3c	70	30.784	YMR309C	-	81	30.112	Saccharomyces_cerevisiae
MGP_PahariEiJ_G0013661	Eif3c	100	96.166	ENSSBOG00000032155	-	100	96.166	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0013661	Eif3c	96	91.846	ENSSHAG00000011808	-	100	92.639	Sarcophilus_harrisii
MGP_PahariEiJ_G0013661	Eif3c	99	74.617	ENSSFOG00015021823	eif3c	98	75.164	Scleropages_formosus
MGP_PahariEiJ_G0013661	Eif3c	97	75.253	ENSSMAG00000016638	eif3c	97	75.366	Scophthalmus_maximus
MGP_PahariEiJ_G0013661	Eif3c	98	78.102	ENSSDUG00000023117	eif3c	98	75.573	Seriola_dumerili
MGP_PahariEiJ_G0013661	Eif3c	99	75.573	ENSSLDG00000009706	eif3c	93	82.516	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0013661	Eif3c	100	83.698	ENSSPUG00000016470	-	100	83.479	Sphenodon_punctatus
MGP_PahariEiJ_G0013661	Eif3c	100	75.082	ENSSPAG00000000426	eif3c	100	74.864	Stegastes_partitus
MGP_PahariEiJ_G0013661	Eif3c	100	96.824	ENSSSCG00000034927	-	100	96.824	Sus_scrofa
MGP_PahariEiJ_G0013661	Eif3c	99	73.283	ENSTRUG00000008951	eif3c	99	73.283	Takifugu_rubripes
MGP_PahariEiJ_G0013661	Eif3c	100	72.905	ENSTNIG00000015210	eif3c	100	73.123	Tetraodon_nigroviridis
MGP_PahariEiJ_G0013661	Eif3c	100	96.386	ENSTTRG00000005880	-	100	96.386	Tursiops_truncatus
MGP_PahariEiJ_G0013661	Eif3c	72	97.252	ENSUAMG00000001127	-	91	98.726	Ursus_americanus
MGP_PahariEiJ_G0013661	Eif3c	100	96.714	ENSUMAG00000010927	-	100	96.714	Ursus_maritimus
MGP_PahariEiJ_G0013661	Eif3c	100	95.181	ENSVVUG00000025970	-	100	95.181	Vulpes_vulpes
MGP_PahariEiJ_G0013661	Eif3c	100	76.948	ENSXETG00000002941	eif3c	100	76.840	Xenopus_tropicalis
MGP_PahariEiJ_G0013661	Eif3c	100	74.162	ENSXMAG00000013796	eif3c	100	73.730	Xiphophorus_maculatus