EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0013702 (Gene tree)
Gene ID: 110323002
Gene Symbol: Sept1
Alias: Diff6|PNUTL3
Full Name: septin 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 16311 bases
Position: chr1:96711002-96727312
Accession: 110323002
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0019194	MMR_HSR1	PF01926.23	2.2e-08	1	1
MGP_PahariEiJ_P0019193	MMR_HSR1	PF01926.23	3.9e-08	1	1
MGP_PahariEiJ_P0019191	MMR_HSR1	PF01926.23	5.5e-08	1	1
MGP_PahariEiJ_P0019189	MMR_HSR1	PF01926.23	5.8e-08	1	1
MGP_PahariEiJ_P0019190	MMR_HSR1	PF01926.23	9.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0019188	-	562	-	-	- (aa)	-	-
MGP_PahariEiJ_T0019189	-	1472	XM_021200014	MGP_PahariEiJ_P0019189	366 (aa)	XP_021055673	UPI000A306366
MGP_PahariEiJ_T0019195	-	834	-	-	- (aa)	-	-
MGP_PahariEiJ_T0019194	-	600	-	MGP_PahariEiJ_P0019194	145 (aa)	-	-
MGP_PahariEiJ_T0019197	-	713	-	-	- (aa)	-	-
MGP_PahariEiJ_T0019196	-	242	-	-	- (aa)	-	-
MGP_PahariEiJ_T0019191	-	1048	-	MGP_PahariEiJ_P0019191	328 (aa)	-	-
MGP_PahariEiJ_T0019190	-	1276	-	MGP_PahariEiJ_P0019190	338 (aa)	-	-
MGP_PahariEiJ_T0019193	-	706	-	MGP_PahariEiJ_P0019193	186 (aa)	-	-
MGP_PahariEiJ_T0019192	-	789	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0013702's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0013702's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0013702	Sept1	100	50.000	MGP_PahariEiJ_G0020080	Sept3	86	46.233
MGP_PahariEiJ_G0013702	Sept1	100	64.138	MGP_PahariEiJ_G0027693	-	100	59.813
MGP_PahariEiJ_G0013702	Sept1	100	37.415	MGP_PahariEiJ_G0017474	Sept8	76	36.499
MGP_PahariEiJ_G0013702	Sept1	100	38.776	MGP_PahariEiJ_G0031540	-	66	40.784
MGP_PahariEiJ_G0013702	Sept1	100	57.931	MGP_PahariEiJ_G0014782	Sept7	73	48.837
MGP_PahariEiJ_G0013702	Sept1	100	46.575	MGP_PahariEiJ_G0016124	Sept12	77	42.570
MGP_PahariEiJ_G0013702	Sept1	100	49.315	MGP_PahariEiJ_G0018591	Sept9	52	44.558
MGP_PahariEiJ_G0013702	Sept1	100	42.857	MGP_PahariEiJ_G0030756	Sept10	71	42.405
MGP_PahariEiJ_G0013702	Sept1	100	68.966	MGP_PahariEiJ_G0016256	-	93	63.352
MGP_PahariEiJ_G0013702	Sept1	100	66.207	MGP_PahariEiJ_G0018060	Sept4	94	66.055
MGP_PahariEiJ_G0013702	Sept1	100	40.136	MGP_PahariEiJ_G0017202	Sept11	76	40.469

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0013702	Sept1	100	95.368	ENSG00000180096	SEPT1	87	98.361	Homo_sapiens
MGP_PahariEiJ_G0013702	Sept1	100	92.353	ENSAMEG00000007865	SEPT1	99	92.916	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0013702	Sept1	100	95.172	ENSANAG00000029084	SEPT1	100	94.823	Aotus_nancymaae
MGP_PahariEiJ_G0013702	Sept1	100	95.862	ENSBTAG00000021219	SEPT1	100	95.095	Bos_taurus
MGP_PahariEiJ_G0013702	Sept1	100	94.483	ENSCJAG00000002577	SEPT1	89	93.460	Callithrix_jacchus
MGP_PahariEiJ_G0013702	Sept1	100	95.172	ENSCAFG00000016576	SEPT1	99	94.262	Canis_familiaris
MGP_PahariEiJ_G0013702	Sept1	100	95.172	ENSCAFG00020017813	SEPT1	99	94.262	Canis_lupus_dingo
MGP_PahariEiJ_G0013702	Sept1	100	92.267	ENSCHIG00000017447	SEPT1	100	92.267	Capra_hircus
MGP_PahariEiJ_G0013702	Sept1	100	94.483	ENSTSYG00000035596	SEPT1	100	93.460	Carlito_syrichta
MGP_PahariEiJ_G0013702	Sept1	100	93.793	ENSCAPG00000001347	SEPT1	99	80.909	Cavia_aperea
MGP_PahariEiJ_G0013702	Sept1	100	93.793	ENSCPOG00000003088	SEPT1	99	91.281	Cavia_porcellus
MGP_PahariEiJ_G0013702	Sept1	100	95.172	ENSCCAG00000030164	SEPT1	89	83.476	Cebus_capucinus
MGP_PahariEiJ_G0013702	Sept1	100	95.172	ENSCATG00000037250	SEPT1	99	95.095	Cercocebus_atys
MGP_PahariEiJ_G0013702	Sept1	100	94.483	ENSCLAG00000010486	SEPT1	100	93.235	Chinchilla_lanigera
MGP_PahariEiJ_G0013702	Sept1	100	95.172	ENSCSAG00000006056	SEPT1	99	95.095	Chlorocebus_sabaeus
MGP_PahariEiJ_G0013702	Sept1	100	95.172	ENSCANG00000035786	SEPT1	89	94.823	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0013702	Sept1	100	97.849	ENSCGRG00001003374	Sept1	100	97.275	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0013702	Sept1	100	97.849	ENSCGRG00000004919	Sept1	100	96.458	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0013702	Sept1	100	94.483	ENSDNOG00000014680	SEPT1	85	93.460	Dasypus_novemcinctus
MGP_PahariEiJ_G0013702	Sept1	100	95.862	ENSDORG00000011443	Sept1	100	95.640	Dipodomys_ordii
MGP_PahariEiJ_G0013702	Sept1	100	94.483	ENSEASG00005013153	SEPT1	100	94.100	Equus_asinus_asinus
MGP_PahariEiJ_G0013702	Sept1	100	94.550	ENSECAG00000009390	SEPT1	96	94.550	Equus_caballus
MGP_PahariEiJ_G0013702	Sept1	100	94.483	ENSEEUG00000007661	SEPT1	100	92.371	Erinaceus_europaeus
MGP_PahariEiJ_G0013702	Sept1	100	95.172	ENSFCAG00000013541	SEPT1	94	94.278	Felis_catus
MGP_PahariEiJ_G0013702	Sept1	100	93.793	ENSGGOG00000017024	SEPT1	88	73.262	Gorilla_gorilla
MGP_PahariEiJ_G0013702	Sept1	100	96.552	ENSSTOG00000002782	SEPT1	100	95.368	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0013702	Sept1	100	96.552	ENSJJAG00000023131	Sept1	100	94.278	Jaculus_jaculus
MGP_PahariEiJ_G0013702	Sept1	100	95.172	ENSLAFG00000027789	SEPT1	99	92.896	Loxodonta_africana
MGP_PahariEiJ_G0013702	Sept1	100	95.172	ENSMFAG00000031504	SEPT1	89	95.095	Macaca_fascicularis
MGP_PahariEiJ_G0013702	Sept1	100	95.172	ENSMMUG00000021842	SEPT1	97	94.985	Macaca_mulatta
MGP_PahariEiJ_G0013702	Sept1	100	95.172	ENSMNEG00000041695	SEPT1	89	83.424	Macaca_nemestrina
MGP_PahariEiJ_G0013702	Sept1	100	96.353	ENSMLEG00000039481	SEPT1	87	96.353	Mandrillus_leucophaeus
MGP_PahariEiJ_G0013702	Sept1	100	97.931	ENSMAUG00000009531	Sept1	100	97.820	Mesocricetus_auratus
MGP_PahariEiJ_G0013702	Sept1	100	97.241	ENSMICG00000011817	SEPT1	94	95.082	Microcebus_murinus
MGP_PahariEiJ_G0013702	Sept1	100	98.387	ENSMOCG00000017518	Sept1	100	97.548	Microtus_ochrogaster
MGP_PahariEiJ_G0013702	Sept1	100	98.634	MGP_CAROLIEiJ_G0030492	Sept1	100	98.634	Mus_caroli
MGP_PahariEiJ_G0013702	Sept1	100	99.390	ENSMUSG00000000486	Sept1	100	99.390	Mus_musculus
MGP_PahariEiJ_G0013702	Sept1	100	99.085	MGP_SPRETEiJ_G0031606	Sept1	100	99.085	Mus_spretus
MGP_PahariEiJ_G0013702	Sept1	100	95.862	ENSMLUG00000006749	SEPT1	99	93.716	Myotis_lucifugus
MGP_PahariEiJ_G0013702	Sept1	100	96.552	ENSNGAG00000021368	Sept1	100	96.185	Nannospalax_galili
MGP_PahariEiJ_G0013702	Sept1	100	90.345	ENSMEUG00000000492	SEPT1	100	87.432	Notamacropus_eugenii
MGP_PahariEiJ_G0013702	Sept1	100	92.414	ENSOPRG00000007981	SEPT1	100	91.008	Ochotona_princeps
MGP_PahariEiJ_G0013702	Sept1	100	95.172	ENSODEG00000014531	SEPT1	100	92.391	Octodon_degus
MGP_PahariEiJ_G0013702	Sept1	100	89.655	ENSOANG00000005331	SEPT1	100	85.559	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0013702	Sept1	100	96.552	ENSOGAG00000013350	SEPT1	99	95.628	Otolemur_garnettii
MGP_PahariEiJ_G0013702	Sept1	100	93.878	ENSOARG00000006135	SEPT1	99	94.293	Ovis_aries
MGP_PahariEiJ_G0013702	Sept1	100	95.172	ENSPPAG00000032680	SEPT1	87	76.294	Pan_paniscus
MGP_PahariEiJ_G0013702	Sept1	100	95.172	ENSPPRG00000008648	-	100	94.262	Panthera_pardus
MGP_PahariEiJ_G0013702	Sept1	100	94.483	ENSPTIG00000006718	SEPT1	87	93.506	Panthera_tigris_altaica
MGP_PahariEiJ_G0013702	Sept1	100	95.368	ENSPTRG00000007998	SEPT1	89	95.368	Pan_troglodytes
MGP_PahariEiJ_G0013702	Sept1	100	96.353	ENSPANG00000032364	SEPT1	97	96.353	Papio_anubis
MGP_PahariEiJ_G0013702	Sept1	100	98.387	ENSPEMG00000023616	Sept1	100	97.820	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0013702	Sept1	100	91.034	ENSPCIG00000001537	SEPT1	100	88.283	Phascolarctos_cinereus
MGP_PahariEiJ_G0013702	Sept1	100	94.483	ENSPPYG00000007270	-	100	93.831	Pongo_abelii
MGP_PahariEiJ_G0013702	Sept1	100	93.793	ENSPCAG00000009042	SEPT1	100	91.826	Procavia_capensis
MGP_PahariEiJ_G0013702	Sept1	100	97.241	ENSPCOG00000028121	SEPT1	90	95.095	Propithecus_coquereli
MGP_PahariEiJ_G0013702	Sept1	100	96.552	ENSPVAG00000008655	SEPT1	100	95.640	Pteropus_vampyrus
MGP_PahariEiJ_G0013702	Sept1	100	98.621	ENSRNOG00000017804	Sept1	100	98.361	Rattus_norvegicus
MGP_PahariEiJ_G0013702	Sept1	100	95.172	ENSRBIG00000036580	SEPT1	89	94.550	Rhinopithecus_bieti
MGP_PahariEiJ_G0013702	Sept1	100	95.172	ENSRROG00000038708	SEPT1	99	94.550	Rhinopithecus_roxellana
MGP_PahariEiJ_G0013702	Sept1	100	95.172	ENSSBOG00000021733	SEPT1	89	94.278	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0013702	Sept1	100	89.655	ENSSHAG00000006478	SEPT1	99	87.123	Sarcophilus_harrisii
MGP_PahariEiJ_G0013702	Sept1	100	95.862	ENSSSCG00000007800	SEPT1	100	95.628	Sus_scrofa
MGP_PahariEiJ_G0013702	Sept1	100	96.552	ENSTTRG00000017272	SEPT1	100	95.095	Tursiops_truncatus
MGP_PahariEiJ_G0013702	Sept1	100	96.552	ENSUAMG00000027438	SEPT1	99	94.823	Ursus_americanus
MGP_PahariEiJ_G0013702	Sept1	100	96.552	ENSUMAG00000011345	SEPT1	100	95.095	Ursus_maritimus
MGP_PahariEiJ_G0013702	Sept1	98	95.070	ENSVVUG00000026116	SEPT1	90	93.452	Vulpes_vulpes