EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0013726 (Gene tree)
Gene ID: 110317687
Gene Symbol: -
Alias: -
Full Name: SET domain containing 1A
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 24665 bases
Position: chr1:97249937-97274601
Accession: 110317687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0019310	RRM_1	PF00076.22	5.8e-07	1	1
MGP_PahariEiJ_P0019309	RRM_1	PF00076.22	8.7e-07	1	1
MGP_PahariEiJ_P0019308	RRM_1	PF00076.22	1.1e-05	1	1
MGP_PahariEiJ_P0019311	RRM_1	PF00076.22	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0019313	-	389	-	-	- (aa)	-	-
MGP_PahariEiJ_T0019312	-	314	-	MGP_PahariEiJ_P0019312	70 (aa)	-	UPI0000DBED8A
MGP_PahariEiJ_T0019311	-	5930	XM_021192325	MGP_PahariEiJ_P0019311	1720 (aa)	XP_021047984	UPI000A30C46B
MGP_PahariEiJ_T0019310	-	730	-	MGP_PahariEiJ_P0019310	196 (aa)	-	-
MGP_PahariEiJ_T0019308	-	6504	-	MGP_PahariEiJ_P0019308	1720 (aa)	-	UPI000A30C46B
MGP_PahariEiJ_T0019309	-	916	-	MGP_PahariEiJ_P0019309	247 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0013726's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0013726's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0013726	-	94	97.403	ENSAMEG00000007540	-	84	91.935	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0013726	-	100	72.081	ENSATEG00000022798	setd1a	51	81.081	Anabas_testudineus
MGP_PahariEiJ_G0013726	-	100	78.061	ENSACAG00000007606	-	60	61.497	Anolis_carolinensis
MGP_PahariEiJ_G0013726	-	100	98.980	ENSANAG00000021698	-	100	86.012	Aotus_nancymaae
MGP_PahariEiJ_G0013726	-	100	73.096	ENSACLG00000024747	setd1a	51	81.757	Astatotilapia_calliptera
MGP_PahariEiJ_G0013726	-	100	98.980	ENSTSYG00000014425	-	100	86.775	Carlito_syrichta
MGP_PahariEiJ_G0013726	-	95	87.097	ENSCAPG00000006491	-	94	91.805	Cavia_aperea
MGP_PahariEiJ_G0013726	-	100	78.680	ENSCPBG00000010830	-	74	60.611	Chrysemys_picta_bellii
MGP_PahariEiJ_G0013726	-	100	98.980	ENSCANG00000038478	-	100	80.552	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0013726	-	100	72.589	ENSCVAG00000011672	setd1a	51	81.419	Cyprinodon_variegatus
MGP_PahariEiJ_G0013726	-	100	98.980	ENSDNOG00000025514	-	98	91.406	Dasypus_novemcinctus
MGP_PahariEiJ_G0013726	-	100	98.980	ENSDORG00000010637	-	100	97.571	Dipodomys_ordii
MGP_PahariEiJ_G0013726	-	100	94.898	ENSETEG00000014170	-	63	82.181	Echinops_telfairi
MGP_PahariEiJ_G0013726	-	100	98.469	ENSEASG00005011195	-	100	87.297	Equus_asinus_asinus
MGP_PahariEiJ_G0013726	-	100	98.980	ENSFDAG00000001621	-	99	97.154	Fukomys_damarensis
MGP_PahariEiJ_G0013726	-	100	72.081	ENSFHEG00000023258	setd1a	64	75.170	Fundulus_heteroclitus
MGP_PahariEiJ_G0013726	-	100	79.188	ENSGAGG00000010781	-	71	72.000	Gopherus_agassizii
MGP_PahariEiJ_G0013726	-	100	73.096	ENSHBUG00000008893	setd1a	51	81.419	Haplochromis_burtoni
MGP_PahariEiJ_G0013726	-	100	98.980	ENSHGLG00000014238	-	100	87.188	Heterocephalus_glaber_female
MGP_PahariEiJ_G0013726	-	100	98.980	ENSHGLG00100010551	-	98	95.635	Heterocephalus_glaber_male
MGP_PahariEiJ_G0013726	-	100	71.066	ENSHCOG00000003119	setd1a	64	79.730	Hippocampus_comes
MGP_PahariEiJ_G0013726	-	100	100.000	ENSJJAG00000015314	-	100	96.761	Jaculus_jaculus
MGP_PahariEiJ_G0013726	-	100	98.980	ENSMNEG00000032572	-	100	87.442	Macaca_nemestrina
MGP_PahariEiJ_G0013726	-	100	72.081	ENSMAMG00000021851	setd1a	69	76.014	Mastacembelus_armatus
MGP_PahariEiJ_G0013726	-	100	73.096	ENSMZEG00005023141	setd1a	51	81.757	Maylandia_zebra
MGP_PahariEiJ_G0013726	-	100	100.000	ENSMAUG00000008959	-	100	94.281	Mesocricetus_auratus
MGP_PahariEiJ_G0013726	-	100	72.081	ENSMMOG00000016992	setd1a	61	80.068	Mola_mola
MGP_PahariEiJ_G0013726	-	99	85.714	ENSMODG00000001726	-	99	75.161	Monodelphis_domestica
MGP_PahariEiJ_G0013726	-	100	100.000	MGP_CAROLIEiJ_G0030519	-	100	100.000	Mus_caroli
MGP_PahariEiJ_G0013726	-	100	99.490	ENSMUSG00000042308	Setd1a	100	99.490	Mus_musculus
MGP_PahariEiJ_G0013726	-	100	98.980	MGP_SPRETEiJ_G0031633	Setd1a	100	98.980	Mus_spretus
MGP_PahariEiJ_G0013726	-	100	98.980	ENSMPUG00000011867	-	76	97.251	Mustela_putorius_furo
MGP_PahariEiJ_G0013726	-	92	98.889	ENSMLUG00000027303	-	79	85.377	Myotis_lucifugus
MGP_PahariEiJ_G0013726	-	100	100.000	ENSNGAG00000012923	-	100	97.166	Nannospalax_galili
MGP_PahariEiJ_G0013726	-	100	73.096	ENSNBRG00000004760	setd1a	52	78.378	Neolamprologus_brichardi
MGP_PahariEiJ_G0013726	-	100	86.640	ENSNLEG00000016072	-	100	86.979	Nomascus_leucogenys
MGP_PahariEiJ_G0013726	-	99	85.204	ENSMEUG00000003396	-	100	75.880	Notamacropus_eugenii
MGP_PahariEiJ_G0013726	-	100	98.469	ENSOPRG00000016034	-	100	85.904	Ochotona_princeps
MGP_PahariEiJ_G0013726	-	100	98.469	ENSODEG00000014550	-	100	96.761	Octodon_degus
MGP_PahariEiJ_G0013726	-	100	88.832	ENSOANG00000013155	-	54	91.837	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0013726	-	100	97.959	ENSOCUG00000022182	-	53	93.189	Oryctolagus_cuniculus
MGP_PahariEiJ_G0013726	-	99	81.026	ENSOGAG00000028006	-	100	63.140	Otolemur_garnettii
MGP_PahariEiJ_G0013726	-	100	98.469	ENSOARG00000008207	-	64	83.055	Ovis_aries
MGP_PahariEiJ_G0013726	-	100	98.980	ENSPPAG00000030470	-	98	95.876	Pan_paniscus
MGP_PahariEiJ_G0013726	-	100	98.980	ENSPTIG00000010871	-	99	96.226	Panthera_tigris_altaica
MGP_PahariEiJ_G0013726	-	99	85.204	ENSPCIG00000016725	-	100	75.200	Phascolarctos_cinereus
MGP_PahariEiJ_G0013726	-	100	71.717	ENSPFOG00000013669	setd1a	55	82.095	Poecilia_formosa
MGP_PahariEiJ_G0013726	-	100	72.081	ENSPLAG00000009294	setd1a	54	82.095	Poecilia_latipinna
MGP_PahariEiJ_G0013726	-	100	72.081	ENSPMEG00000005864	setd1a	53	82.095	Poecilia_mexicana
MGP_PahariEiJ_G0013726	-	100	98.980	ENSPPYG00000007296	-	100	100.000	Pongo_abelii
MGP_PahariEiJ_G0013726	-	78	97.449	ENSPCAG00000014351	-	85	97.449	Procavia_capensis
MGP_PahariEiJ_G0013726	-	100	97.959	ENSPVAG00000011049	-	95	98.122	Pteropus_vampyrus
MGP_PahariEiJ_G0013726	-	100	72.589	ENSPNYG00000014139	setd1a	51	81.757	Pundamilia_nyererei
MGP_PahariEiJ_G0013726	-	100	98.980	ENSRBIG00000033047	-	100	95.563	Rhinopithecus_bieti
MGP_PahariEiJ_G0013726	-	100	98.980	ENSRROG00000040062	-	99	95.876	Rhinopithecus_roxellana
MGP_PahariEiJ_G0013726	-	99	85.714	ENSSHAG00000010784	-	100	75.686	Sarcophilus_harrisii
MGP_PahariEiJ_G0013726	-	80	85.741	ENSSARG00000005591	-	89	86.027	Sorex_araneus
MGP_PahariEiJ_G0013726	-	81	97.512	ENSTBEG00000009714	-	70	100.000	Tupaia_belangeri
MGP_PahariEiJ_G0013726	-	100	98.980	ENSUMAG00000013935	-	91	96.825	Ursus_maritimus
MGP_PahariEiJ_G0013726	-	100	98.980	ENSVVUG00000027687	-	96	88.487	Vulpes_vulpes
MGP_PahariEiJ_G0013726	-	98	67.358	ENSXETG00000001921	setd1a	50	79.412	Xenopus_tropicalis
MGP_PahariEiJ_G0013726	-	100	72.081	ENSXCOG00000017585	setd1a	51	79.530	Xiphophorus_couchianus