EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0013960 (Gene tree)
Gene ID: 110319659
Gene Symbol: Ighmbp2
Alias: AEP|Catf1|RIPE3b1|Smbp-2|Smbp2|Smubp2|p110 subunit|sma
Full Name: immunoglobulin mu DNA binding protein 2
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 20763 bases
Position: chr1:114669187-114689949
Accession: 110319659
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0020335	R3H	PF01424.22	5.4e-12	1	1
MGP_PahariEiJ_P0020336	R3H	PF01424.22	6e-12	1	1
MGP_PahariEiJ_P0020335	ResIII	PF04851.15	5.5e-06	1	1
MGP_PahariEiJ_P0020336	ResIII	PF04851.15	7.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0020335	-	3472	-	MGP_PahariEiJ_P0020335	883 (aa)	-	-
MGP_PahariEiJ_T0020337	-	2648	-	MGP_PahariEiJ_P0020337	253 (aa)	-	-
MGP_PahariEiJ_T0020336	-	3679	XM_021195183	MGP_PahariEiJ_P0020336	991 (aa)	XP_021050842	UPI000A306D93
MGP_PahariEiJ_T0020338	-	850	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0013960's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0013960's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0013960	Ighmbp2	100	77.368	ENSG00000132740	IGHMBP2	100	82.759	Homo_sapiens
MGP_PahariEiJ_G0013960	Ighmbp2	99	58.358	ENSAPOG00000009399	ighmbp2	99	58.342	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0013960	Ighmbp2	99	75.403	ENSAMEG00000008568	IGHMBP2	100	74.850	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0013960	Ighmbp2	99	58.829	ENSACIG00000004670	ighmbp2	99	58.249	Amphilophus_citrinellus
MGP_PahariEiJ_G0013960	Ighmbp2	99	58.209	ENSAOCG00000019390	ighmbp2	99	57.968	Amphiprion_ocellaris
MGP_PahariEiJ_G0013960	Ighmbp2	99	58.425	ENSAPEG00000021713	ighmbp2	99	58.442	Amphiprion_percula
MGP_PahariEiJ_G0013960	Ighmbp2	99	58.765	ENSATEG00000010246	ighmbp2	96	58.765	Anabas_testudineus
MGP_PahariEiJ_G0013960	Ighmbp2	96	64.609	ENSAPLG00000003251	IGHMBP2	100	64.796	Anas_platyrhynchos
MGP_PahariEiJ_G0013960	Ighmbp2	99	60.490	ENSACAG00000013702	IGHMBP2	99	60.472	Anolis_carolinensis
MGP_PahariEiJ_G0013960	Ighmbp2	100	76.923	ENSANAG00000027309	IGHMBP2	100	76.683	Aotus_nancymaae
MGP_PahariEiJ_G0013960	Ighmbp2	99	58.200	ENSACLG00000014140	ighmbp2	99	57.916	Astatotilapia_calliptera
MGP_PahariEiJ_G0013960	Ighmbp2	99	58.185	ENSAMXG00000000503	ighmbp2	99	57.594	Astyanax_mexicanus
MGP_PahariEiJ_G0013960	Ighmbp2	99	73.480	ENSBTAG00000022185	IGHMBP2	99	72.527	Bos_taurus
MGP_PahariEiJ_G0013960	Ighmbp2	100	75.147	ENSCJAG00000015887	IGHMBP2	93	75.099	Callithrix_jacchus
MGP_PahariEiJ_G0013960	Ighmbp2	99	74.848	ENSCAFG00000010745	IGHMBP2	100	74.052	Canis_familiaris
MGP_PahariEiJ_G0013960	Ighmbp2	69	69.101	ENSCAFG00020015362	IGHMBP2	89	68.094	Canis_lupus_dingo
MGP_PahariEiJ_G0013960	Ighmbp2	99	74.145	ENSCHIG00000011703	IGHMBP2	99	73.500	Capra_hircus
MGP_PahariEiJ_G0013960	Ighmbp2	98	77.812	ENSCAPG00000001471	IGHMBP2	99	77.198	Cavia_aperea
MGP_PahariEiJ_G0013960	Ighmbp2	99	78.947	ENSCPOG00000007063	IGHMBP2	94	77.845	Cavia_porcellus
MGP_PahariEiJ_G0013960	Ighmbp2	99	76.476	ENSCCAG00000027106	IGHMBP2	99	75.900	Cebus_capucinus
MGP_PahariEiJ_G0013960	Ighmbp2	100	67.928	ENSCATG00000031229	IGHMBP2	100	67.968	Cercocebus_atys
MGP_PahariEiJ_G0013960	Ighmbp2	99	78.449	ENSCLAG00000015500	IGHMBP2	99	78.348	Chinchilla_lanigera
MGP_PahariEiJ_G0013960	Ighmbp2	100	75.619	ENSCSAG00000009185	IGHMBP2	100	74.975	Chlorocebus_sabaeus
MGP_PahariEiJ_G0013960	Ighmbp2	99	64.166	ENSCPBG00000008799	IGHMBP2	99	63.224	Chrysemys_picta_bellii
MGP_PahariEiJ_G0013960	Ighmbp2	90	48.216	ENSCING00000005102	zf(an1/a20like)-2	86	48.578	Ciona_intestinalis
MGP_PahariEiJ_G0013960	Ighmbp2	99	45.527	ENSCSAVG00000006222	-	99	44.554	Ciona_savignyi
MGP_PahariEiJ_G0013960	Ighmbp2	100	75.670	ENSCANG00000043714	IGHMBP2	100	75.025	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0013960	Ighmbp2	100	90.616	ENSCGRG00001019126	Ighmbp2	100	90.616	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0013960	Ighmbp2	100	90.616	ENSCGRG00000009642	Ighmbp2	100	90.616	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0013960	Ighmbp2	99	57.387	ENSCSEG00000007513	ighmbp2	99	57.460	Cynoglossus_semilaevis
MGP_PahariEiJ_G0013960	Ighmbp2	97	59.482	ENSCVAG00000007876	ighmbp2	99	58.635	Cyprinodon_variegatus
MGP_PahariEiJ_G0013960	Ighmbp2	99	58.229	ENSDARG00000069274	ighmbp2	99	56.395	Danio_rerio
MGP_PahariEiJ_G0013960	Ighmbp2	99	73.246	ENSDNOG00000002334	IGHMBP2	100	72.992	Dasypus_novemcinctus
MGP_PahariEiJ_G0013960	Ighmbp2	85	75.297	ENSDORG00000026350	Ighmbp2	100	69.493	Dipodomys_ordii
MGP_PahariEiJ_G0013960	Ighmbp2	93	69.540	ENSETEG00000003178	IGHMBP2	93	69.540	Echinops_telfairi
MGP_PahariEiJ_G0013960	Ighmbp2	99	52.480	ENSEBUG00000010471	ighmbp2	99	52.243	Eptatretus_burgeri
MGP_PahariEiJ_G0013960	Ighmbp2	99	75.879	ENSEASG00005007735	IGHMBP2	100	74.775	Equus_asinus_asinus
MGP_PahariEiJ_G0013960	Ighmbp2	97	75.231	ENSECAG00000019360	IGHMBP2	98	74.431	Equus_caballus
MGP_PahariEiJ_G0013960	Ighmbp2	99	56.444	ENSELUG00000023450	ighmbp2	99	56.200	Esox_lucius
MGP_PahariEiJ_G0013960	Ighmbp2	99	72.211	ENSFCAG00000010879	IGHMBP2	100	71.642	Felis_catus
MGP_PahariEiJ_G0013960	Ighmbp2	99	59.980	ENSFALG00000011604	IGHMBP2	100	60.621	Ficedula_albicollis
MGP_PahariEiJ_G0013960	Ighmbp2	92	83.717	ENSFDAG00000005011	IGHMBP2	92	83.717	Fukomys_damarensis
MGP_PahariEiJ_G0013960	Ighmbp2	99	59.059	ENSFHEG00000021211	ighmbp2	99	58.753	Fundulus_heteroclitus
MGP_PahariEiJ_G0013960	Ighmbp2	99	57.257	ENSGMOG00000017553	ighmbp2	99	57.085	Gadus_morhua
MGP_PahariEiJ_G0013960	Ighmbp2	96	64.536	ENSGALG00000004328	IGHMBP2	100	63.817	Gallus_gallus
MGP_PahariEiJ_G0013960	Ighmbp2	99	58.175	ENSGAFG00000020770	ighmbp2	99	58.191	Gambusia_affinis
MGP_PahariEiJ_G0013960	Ighmbp2	99	57.507	ENSGACG00000005293	ighmbp2	99	57.143	Gasterosteus_aculeatus
MGP_PahariEiJ_G0013960	Ighmbp2	99	65.261	ENSGAGG00000020312	IGHMBP2	92	64.647	Gopherus_agassizii
MGP_PahariEiJ_G0013960	Ighmbp2	100	77.358	ENSGGOG00000012131	IGHMBP2	100	75.944	Gorilla_gorilla
MGP_PahariEiJ_G0013960	Ighmbp2	99	58.258	ENSHBUG00000018318	ighmbp2	99	58.016	Haplochromis_burtoni
MGP_PahariEiJ_G0013960	Ighmbp2	99	78.046	ENSHGLG00000006468	IGHMBP2	99	77.332	Heterocephalus_glaber_female
MGP_PahariEiJ_G0013960	Ighmbp2	99	77.946	ENSHGLG00100009290	IGHMBP2	99	77.232	Heterocephalus_glaber_male
MGP_PahariEiJ_G0013960	Ighmbp2	99	58.350	ENSHCOG00000018786	ighmbp2	99	58.350	Hippocampus_comes
MGP_PahariEiJ_G0013960	Ighmbp2	99	56.064	ENSIPUG00000023036	ighmbp2	99	55.391	Ictalurus_punctatus
MGP_PahariEiJ_G0013960	Ighmbp2	97	73.055	ENSSTOG00000003792	IGHMBP2	92	76.667	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0013960	Ighmbp2	100	83.032	ENSJJAG00000022964	Ighmbp2	100	83.032	Jaculus_jaculus
MGP_PahariEiJ_G0013960	Ighmbp2	99	58.889	ENSKMAG00000020284	ighmbp2	99	58.367	Kryptolebias_marmoratus
MGP_PahariEiJ_G0013960	Ighmbp2	99	56.827	ENSLBEG00000014501	ighmbp2	99	56.740	Labrus_bergylta
MGP_PahariEiJ_G0013960	Ighmbp2	99	58.500	ENSLACG00000018792	IGHMBP2	99	58.474	Latimeria_chalumnae
MGP_PahariEiJ_G0013960	Ighmbp2	99	57.440	ENSLOCG00000001512	ighmbp2	99	56.985	Lepisosteus_oculatus
MGP_PahariEiJ_G0013960	Ighmbp2	76	71.240	ENSLAFG00000022445	IGHMBP2	100	70.356	Loxodonta_africana
MGP_PahariEiJ_G0013960	Ighmbp2	100	76.040	ENSMFAG00000043909	IGHMBP2	100	75.175	Macaca_fascicularis
MGP_PahariEiJ_G0013960	Ighmbp2	100	72.493	ENSMNEG00000043511	IGHMBP2	100	71.772	Macaca_nemestrina
MGP_PahariEiJ_G0013960	Ighmbp2	100	75.869	ENSMLEG00000043529	IGHMBP2	100	75.175	Mandrillus_leucophaeus
MGP_PahariEiJ_G0013960	Ighmbp2	99	57.415	ENSMAMG00000005532	ighmbp2	99	57.385	Mastacembelus_armatus
MGP_PahariEiJ_G0013960	Ighmbp2	99	58.300	ENSMZEG00005000665	ighmbp2	99	58.016	Maylandia_zebra
MGP_PahariEiJ_G0013960	Ighmbp2	96	64.523	ENSMGAG00000002792	IGHMBP2	100	63.861	Meleagris_gallopavo
MGP_PahariEiJ_G0013960	Ighmbp2	100	89.203	ENSMAUG00000019893	Ighmbp2	100	89.203	Mesocricetus_auratus
MGP_PahariEiJ_G0013960	Ighmbp2	93	82.278	ENSMICG00000043944	IGHMBP2	99	82.278	Microcebus_murinus
MGP_PahariEiJ_G0013960	Ighmbp2	100	90.313	ENSMOCG00000018939	Ighmbp2	100	90.313	Microtus_ochrogaster
MGP_PahariEiJ_G0013960	Ighmbp2	99	57.708	ENSMMOG00000001234	ighmbp2	99	57.447	Mola_mola
MGP_PahariEiJ_G0013960	Ighmbp2	98	65.276	ENSMODG00000004040	IGHMBP2	89	64.194	Monodelphis_domestica
MGP_PahariEiJ_G0013960	Ighmbp2	99	57.715	ENSMALG00000006457	ighmbp2	99	57.816	Monopterus_albus
MGP_PahariEiJ_G0013960	Ighmbp2	100	95.161	MGP_CAROLIEiJ_G0022463	Ighmbp2	100	95.161	Mus_caroli
MGP_PahariEiJ_G0013960	Ighmbp2	100	95.267	ENSMUSG00000024831	Ighmbp2	100	95.267	Mus_musculus
MGP_PahariEiJ_G0013960	Ighmbp2	100	95.569	MGP_SPRETEiJ_G0014700	Ighmbp2	100	95.569	Mus_spretus
MGP_PahariEiJ_G0013960	Ighmbp2	97	72.959	ENSMPUG00000004439	IGHMBP2	100	72.737	Mustela_putorius_furo
MGP_PahariEiJ_G0013960	Ighmbp2	100	80.986	ENSNGAG00000006566	Ighmbp2	100	81.407	Nannospalax_galili
MGP_PahariEiJ_G0013960	Ighmbp2	97	58.514	ENSNBRG00000014911	ighmbp2	99	57.631	Neolamprologus_brichardi
MGP_PahariEiJ_G0013960	Ighmbp2	100	71.928	ENSNLEG00000006609	IGHMBP2	100	71.457	Nomascus_leucogenys
MGP_PahariEiJ_G0013960	Ighmbp2	64	60.658	ENSOPRG00000011904	-	99	59.781	Ochotona_princeps
MGP_PahariEiJ_G0013960	Ighmbp2	99	77.565	ENSODEG00000017354	IGHMBP2	99	77.186	Octodon_degus
MGP_PahariEiJ_G0013960	Ighmbp2	99	58.350	ENSONIG00000015506	ighmbp2	99	57.415	Oreochromis_niloticus
MGP_PahariEiJ_G0013960	Ighmbp2	99	57.753	ENSORLG00000006561	ighmbp2	99	57.597	Oryzias_latipes
MGP_PahariEiJ_G0013960	Ighmbp2	99	57.952	ENSORLG00020008462	ighmbp2	99	57.639	Oryzias_latipes_hni
MGP_PahariEiJ_G0013960	Ighmbp2	99	56.275	ENSORLG00015001563	ighmbp2	99	56.461	Oryzias_latipes_hsok
MGP_PahariEiJ_G0013960	Ighmbp2	99	58.350	ENSOMEG00000019296	ighmbp2	99	58.576	Oryzias_melastigma
MGP_PahariEiJ_G0013960	Ighmbp2	99	72.827	ENSOGAG00000011671	IGHMBP2	99	72.892	Otolemur_garnettii
MGP_PahariEiJ_G0013960	Ighmbp2	97	69.669	ENSOARG00000016959	IGHMBP2	99	69.751	Ovis_aries
MGP_PahariEiJ_G0013960	Ighmbp2	100	77.557	ENSPPAG00000027355	IGHMBP2	100	76.143	Pan_paniscus
MGP_PahariEiJ_G0013960	Ighmbp2	99	73.401	ENSPPRG00000024194	IGHMBP2	100	73.065	Panthera_pardus
MGP_PahariEiJ_G0013960	Ighmbp2	100	77.756	ENSPTRG00000003989	IGHMBP2	100	76.777	Pan_troglodytes
MGP_PahariEiJ_G0013960	Ighmbp2	100	72.195	ENSPANG00000023650	IGHMBP2	100	71.471	Papio_anubis
MGP_PahariEiJ_G0013960	Ighmbp2	99	57.029	ENSPKIG00000019306	ighmbp2	99	56.076	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0013960	Ighmbp2	93	65.812	ENSPSIG00000015808	IGHMBP2	100	64.294	Pelodiscus_sinensis
MGP_PahariEiJ_G0013960	Ighmbp2	100	90.212	ENSPEMG00000017775	Ighmbp2	100	90.212	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0013960	Ighmbp2	94	69.975	ENSPCIG00000011064	IGHMBP2	87	71.053	Phascolarctos_cinereus
MGP_PahariEiJ_G0013960	Ighmbp2	99	57.271	ENSPFOG00000010607	ighmbp2	99	58.249	Poecilia_formosa
MGP_PahariEiJ_G0013960	Ighmbp2	99	58.610	ENSPLAG00000003917	ighmbp2	99	58.207	Poecilia_latipinna
MGP_PahariEiJ_G0013960	Ighmbp2	99	58.167	ENSPMEG00000021063	ighmbp2	99	58.058	Poecilia_mexicana
MGP_PahariEiJ_G0013960	Ighmbp2	99	57.805	ENSPREG00000011223	ighmbp2	99	58.207	Poecilia_reticulata
MGP_PahariEiJ_G0013960	Ighmbp2	66	72.590	ENSPPYG00000002965	-	100	71.148	Pongo_abelii
MGP_PahariEiJ_G0013960	Ighmbp2	57	78.462	ENSPCAG00000003490	-	57	78.462	Procavia_capensis
MGP_PahariEiJ_G0013960	Ighmbp2	99	73.414	ENSPCOG00000018759	IGHMBP2	99	73.817	Propithecus_coquereli
MGP_PahariEiJ_G0013960	Ighmbp2	89	68.861	ENSPVAG00000012921	IGHMBP2	100	67.972	Pteropus_vampyrus
MGP_PahariEiJ_G0013960	Ighmbp2	99	58.300	ENSPNYG00000015003	ighmbp2	99	58.016	Pundamilia_nyererei
MGP_PahariEiJ_G0013960	Ighmbp2	99	57.228	ENSPNAG00000013815	ighmbp2	99	57.185	Pygocentrus_nattereri
MGP_PahariEiJ_G0013960	Ighmbp2	100	93.441	ENSRNOG00000013456	Ighmbp2	100	93.463	Rattus_norvegicus
MGP_PahariEiJ_G0013960	Ighmbp2	100	75.472	ENSRBIG00000044249	IGHMBP2	100	74.725	Rhinopithecus_bieti
MGP_PahariEiJ_G0013960	Ighmbp2	100	75.869	ENSRROG00000045646	IGHMBP2	100	75.125	Rhinopithecus_roxellana
MGP_PahariEiJ_G0013960	Ighmbp2	71	34.417	YKL017C	HCS1	98	34.821	Saccharomyces_cerevisiae
MGP_PahariEiJ_G0013960	Ighmbp2	100	72.328	ENSSBOG00000021342	IGHMBP2	100	72.362	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0013960	Ighmbp2	76	59.545	ENSSHAG00000001585	-	99	59.949	Sarcophilus_harrisii
MGP_PahariEiJ_G0013960	Ighmbp2	99	55.947	ENSSFOG00015016074	ighmbp2	92	56.136	Scleropages_formosus
MGP_PahariEiJ_G0013960	Ighmbp2	99	57.639	ENSSMAG00000013687	ighmbp2	99	57.228	Scophthalmus_maximus
MGP_PahariEiJ_G0013960	Ighmbp2	99	57.816	ENSSDUG00000013150	ighmbp2	99	58.184	Seriola_dumerili
MGP_PahariEiJ_G0013960	Ighmbp2	99	57.900	ENSSLDG00000023119	ighmbp2	99	57.884	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0013960	Ighmbp2	64	61.256	ENSSPUG00000008810	IGHMBP2	99	61.492	Sphenodon_punctatus
MGP_PahariEiJ_G0013960	Ighmbp2	99	58.617	ENSSPAG00000011541	ighmbp2	99	58.032	Stegastes_partitus
MGP_PahariEiJ_G0013960	Ighmbp2	99	72.205	ENSSSCG00000012878	IGHMBP2	99	71.285	Sus_scrofa
MGP_PahariEiJ_G0013960	Ighmbp2	96	62.910	ENSTGUG00000006705	-	100	62.974	Taeniopygia_guttata
MGP_PahariEiJ_G0013960	Ighmbp2	99	57.400	ENSTRUG00000003491	ighmbp2	99	57.315	Takifugu_rubripes
MGP_PahariEiJ_G0013960	Ighmbp2	99	56.461	ENSTNIG00000016069	ighmbp2	99	56.857	Tetraodon_nigroviridis
MGP_PahariEiJ_G0013960	Ighmbp2	83	84.236	ENSTBEG00000017260	IGHMBP2	94	69.972	Tupaia_belangeri
MGP_PahariEiJ_G0013960	Ighmbp2	88	81.780	ENSTTRG00000013636	IGHMBP2	88	81.780	Tursiops_truncatus
MGP_PahariEiJ_G0013960	Ighmbp2	99	74.727	ENSUAMG00000024817	IGHMBP2	100	74.232	Ursus_americanus
MGP_PahariEiJ_G0013960	Ighmbp2	99	72.718	ENSUMAG00000018347	IGHMBP2	99	71.342	Ursus_maritimus
MGP_PahariEiJ_G0013960	Ighmbp2	99	74.177	ENSVVUG00000004811	IGHMBP2	100	73.498	Vulpes_vulpes
MGP_PahariEiJ_G0013960	Ighmbp2	91	61.597	ENSXETG00000031258	IGHMBP2	100	61.297	Xenopus_tropicalis
MGP_PahariEiJ_G0013960	Ighmbp2	99	58.016	ENSXCOG00000003758	ighmbp2	99	57.932	Xiphophorus_couchianus
MGP_PahariEiJ_G0013960	Ighmbp2	99	57.487	ENSXMAG00000003705	ighmbp2	99	57.789	Xiphophorus_maculatus