EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0014012 (Gene tree)
Gene ID: 110325388
Gene Symbol: Rbm4b
Alias: 4921506I22Rik|Lark2
Full Name: RNA-binding protein 4B
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 10582 bases
Position: chr1:116161872-116172453
Accession: 110325388
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0020536	zf-CCHC	PF00098.23	3.1e-07	1	1
MGP_PahariEiJ_P0020536	RRM_5	PF13893.6	3.7e-08	1	2
MGP_PahariEiJ_P0020536	RRM_5	PF13893.6	3.7e-08	2	2
MGP_PahariEiJ_P0020536	RRM_1	PF00076.22	1.3e-34	1	2
MGP_PahariEiJ_P0020536	RRM_1	PF00076.22	1.3e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0020537	-	5680	-	-	- (aa)	-	-
MGP_PahariEiJ_T0020536	-	1792	XM_021203357	MGP_PahariEiJ_P0020536	357 (aa)	XP_021059016	UPI000A3090C8
MGP_PahariEiJ_T0020535	-	3778	-	-	- (aa)	-	-
MGP_PahariEiJ_T0020534	-	1181	-	-	- (aa)	-	-
MGP_PahariEiJ_T0020538	-	408	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0014012's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0014012's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0014012	Rbm4b	100	85.912	MGP_PahariEiJ_G0014011	-	100	85.359
MGP_PahariEiJ_G0014012	Rbm4b	100	85.912	MGP_PahariEiJ_G0014013	-	97	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0014012	Rbm4b	96	98.780	ENSG00000173933	RBM4	97	98.551	Homo_sapiens
MGP_PahariEiJ_G0014012	Rbm4b	99	61.749	ENSG00000248643	RBM14-RBM4	100	60.274	Homo_sapiens
MGP_PahariEiJ_G0014012	Rbm4b	100	96.100	ENSG00000173914	RBM4B	97	99.281	Homo_sapiens
MGP_PahariEiJ_G0014012	Rbm4b	100	96.379	ENSAMEG00000010906	RBM4B	100	96.379	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0014012	Rbm4b	100	85.479	ENSAMEG00000010914	RBM4	100	84.932	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0014012	Rbm4b	100	95.822	ENSANAG00000023478	RBM4B	97	99.281	Aotus_nancymaae
MGP_PahariEiJ_G0014012	Rbm4b	100	86.188	ENSBTAG00000031688	RBM4	100	85.635	Bos_taurus
MGP_PahariEiJ_G0014012	Rbm4b	100	95.543	ENSBTAG00000000423	RBM4B	100	95.543	Bos_taurus
MGP_PahariEiJ_G0014012	Rbm4b	100	96.100	ENSCJAG00000013666	RBM4B	97	99.281	Callithrix_jacchus
MGP_PahariEiJ_G0014012	Rbm4b	100	85.479	ENSCAFG00000012388	RBM4	100	84.932	Canis_familiaris
MGP_PahariEiJ_G0014012	Rbm4b	100	96.100	ENSCAFG00000012378	RBM4B	100	96.100	Canis_familiaris
MGP_PahariEiJ_G0014012	Rbm4b	100	96.100	ENSCAFG00020015519	RBM4B	100	96.100	Canis_lupus_dingo
MGP_PahariEiJ_G0014012	Rbm4b	100	85.479	ENSCAFG00020015515	RBM4	100	84.932	Canis_lupus_dingo
MGP_PahariEiJ_G0014012	Rbm4b	100	95.822	ENSCHIG00000008907	RBM4B	100	95.822	Capra_hircus
MGP_PahariEiJ_G0014012	Rbm4b	100	86.188	ENSCHIG00000020613	RBM4	100	85.635	Capra_hircus
MGP_PahariEiJ_G0014012	Rbm4b	65	87.660	ENSTSYG00000009580	RBM4B	96	86.809	Carlito_syrichta
MGP_PahariEiJ_G0014012	Rbm4b	100	96.657	ENSCAPG00000009570	RBM4B	100	96.657	Cavia_aperea
MGP_PahariEiJ_G0014012	Rbm4b	100	85.205	ENSCAPG00000016600	RBM4	97	99.275	Cavia_aperea
MGP_PahariEiJ_G0014012	Rbm4b	100	85.205	ENSCPOG00000013194	RBM4	97	99.275	Cavia_porcellus
MGP_PahariEiJ_G0014012	Rbm4b	100	96.657	ENSCPOG00000013689	RBM4B	100	96.657	Cavia_porcellus
MGP_PahariEiJ_G0014012	Rbm4b	56	71.642	ENSCCAG00000023319	-	100	71.642	Cebus_capucinus
MGP_PahariEiJ_G0014012	Rbm4b	100	96.100	ENSCCAG00000016501	RBM4B	97	99.281	Cebus_capucinus
MGP_PahariEiJ_G0014012	Rbm4b	100	96.100	ENSCATG00000035353	RBM4B	97	99.281	Cercocebus_atys
MGP_PahariEiJ_G0014012	Rbm4b	100	84.932	ENSCLAG00000014756	RBM4	97	99.275	Chinchilla_lanigera
MGP_PahariEiJ_G0014012	Rbm4b	100	96.927	ENSCLAG00000015287	RBM4B	100	96.927	Chinchilla_lanigera
MGP_PahariEiJ_G0014012	Rbm4b	100	96.100	ENSCSAG00000008361	RBM4B	100	96.100	Chlorocebus_sabaeus
MGP_PahariEiJ_G0014012	Rbm4b	100	95.822	ENSCHOG00000002892	RBM4B	100	95.822	Choloepus_hoffmanni
MGP_PahariEiJ_G0014012	Rbm4b	61	77.093	ENSCHOG00000009753	RBM14-RBM4	100	76.211	Choloepus_hoffmanni
MGP_PahariEiJ_G0014012	Rbm4b	100	74.016	ENSCPBG00000023800	-	100	72.895	Chrysemys_picta_bellii
MGP_PahariEiJ_G0014012	Rbm4b	100	96.100	ENSCANG00000021868	RBM4B	97	99.281	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0014012	Rbm4b	100	97.199	ENSCGRG00001024693	Rbm4b	100	97.199	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0014012	Rbm4b	100	86.389	ENSCGRG00001016609	-	97	100.000	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0014012	Rbm4b	100	86.389	ENSCGRG00000010183	-	97	100.000	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0014012	Rbm4b	100	97.199	ENSCGRG00000012112	Rbm4b	100	97.199	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0014012	Rbm4b	100	84.932	ENSDNOG00000032390	RBM4	100	84.384	Dasypus_novemcinctus
MGP_PahariEiJ_G0014012	Rbm4b	100	94.693	ENSDNOG00000045639	-	100	93.017	Dasypus_novemcinctus
MGP_PahariEiJ_G0014012	Rbm4b	100	95.810	ENSDNOG00000019500	-	100	95.810	Dasypus_novemcinctus
MGP_PahariEiJ_G0014012	Rbm4b	100	96.639	ENSDORG00000029108	Rbm4b	100	96.639	Dipodomys_ordii
MGP_PahariEiJ_G0014012	Rbm4b	100	85.399	ENSDORG00000004538	-	97	97.826	Dipodomys_ordii
MGP_PahariEiJ_G0014012	Rbm4b	61	70.909	ENSETEG00000018142	-	100	70.909	Echinops_telfairi
MGP_PahariEiJ_G0014012	Rbm4b	100	86.427	ENSEASG00005005064	RBM4	100	85.873	Equus_asinus_asinus
MGP_PahariEiJ_G0014012	Rbm4b	100	96.100	ENSEASG00005005068	RBM4B	100	96.100	Equus_asinus_asinus
MGP_PahariEiJ_G0014012	Rbm4b	100	95.822	ENSECAG00000022987	RBM4B	100	95.822	Equus_caballus
MGP_PahariEiJ_G0014012	Rbm4b	100	86.427	ENSECAG00000022940	RBM4	100	85.873	Equus_caballus
MGP_PahariEiJ_G0014012	Rbm4b	100	89.835	ENSEEUG00000000058	RBM4B	100	89.560	Erinaceus_europaeus
MGP_PahariEiJ_G0014012	Rbm4b	100	96.657	ENSFCAG00000007394	RBM4B	100	96.657	Felis_catus
MGP_PahariEiJ_G0014012	Rbm4b	100	85.479	ENSFCAG00000029651	RBM4	97	98.551	Felis_catus
MGP_PahariEiJ_G0014012	Rbm4b	100	69.189	ENSFALG00000002073	-	100	68.564	Ficedula_albicollis
MGP_PahariEiJ_G0014012	Rbm4b	100	96.369	ENSFDAG00000015530	RBM4B	100	96.369	Fukomys_damarensis
MGP_PahariEiJ_G0014012	Rbm4b	100	84.932	ENSFDAG00000005447	RBM4	97	99.275	Fukomys_damarensis
MGP_PahariEiJ_G0014012	Rbm4b	100	76.267	ENSGALG00000037946	-	100	75.134	Gallus_gallus
MGP_PahariEiJ_G0014012	Rbm4b	100	73.753	ENSGAGG00000008553	-	100	72.632	Gopherus_agassizii
MGP_PahariEiJ_G0014012	Rbm4b	100	96.100	ENSGGOG00000011698	RBM4B	97	99.281	Gorilla_gorilla
MGP_PahariEiJ_G0014012	Rbm4b	78	60.303	ENSHGLG00000000117	-	95	71.866	Heterocephalus_glaber_female
MGP_PahariEiJ_G0014012	Rbm4b	100	81.793	ENSHGLG00000002853	-	100	81.232	Heterocephalus_glaber_female
MGP_PahariEiJ_G0014012	Rbm4b	100	96.657	ENSHGLG00000016412	-	100	96.657	Heterocephalus_glaber_female
MGP_PahariEiJ_G0014012	Rbm4b	100	85.205	ENSHGLG00000009991	RBM4	97	99.275	Heterocephalus_glaber_female
MGP_PahariEiJ_G0014012	Rbm4b	96	83.284	ENSHGLG00100020033	-	100	82.698	Heterocephalus_glaber_male
MGP_PahariEiJ_G0014012	Rbm4b	100	96.648	ENSHGLG00100003978	-	100	96.648	Heterocephalus_glaber_male
MGP_PahariEiJ_G0014012	Rbm4b	100	78.393	ENSHGLG00100003854	RBM4	97	99.275	Heterocephalus_glaber_male
MGP_PahariEiJ_G0014012	Rbm4b	100	96.657	ENSSTOG00000011226	RBM4B	100	96.657	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0014012	Rbm4b	100	85.205	ENSSTOG00000022811	RBM4	97	98.551	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0014012	Rbm4b	100	94.958	ENSJJAG00000020870	Rbm4b	100	94.958	Jaculus_jaculus
MGP_PahariEiJ_G0014012	Rbm4b	100	89.972	ENSLAFG00000002285	RBM4B	100	92.479	Loxodonta_africana
MGP_PahariEiJ_G0014012	Rbm4b	100	84.658	ENSLAFG00000028147	-	100	84.110	Loxodonta_africana
MGP_PahariEiJ_G0014012	Rbm4b	100	96.100	ENSMFAG00000033927	RBM4B	97	100.000	Macaca_fascicularis
MGP_PahariEiJ_G0014012	Rbm4b	100	96.100	ENSMNEG00000043371	RBM4B	97	99.281	Macaca_nemestrina
MGP_PahariEiJ_G0014012	Rbm4b	100	96.100	ENSMLEG00000028563	RBM4B	97	100.000	Mandrillus_leucophaeus
MGP_PahariEiJ_G0014012	Rbm4b	100	98.039	ENSMAUG00000017027	Rbm4b	100	98.039	Mesocricetus_auratus
MGP_PahariEiJ_G0014012	Rbm4b	100	95.543	ENSMICG00000003820	RBM4B	97	99.281	Microcebus_murinus
MGP_PahariEiJ_G0014012	Rbm4b	100	98.039	ENSMOCG00000001835	Rbm4b	100	98.039	Microtus_ochrogaster
MGP_PahariEiJ_G0014012	Rbm4b	100	83.696	ENSMODG00000008056	-	100	83.424	Monodelphis_domestica
MGP_PahariEiJ_G0014012	Rbm4b	99	61.602	MGP_CAROLIEiJ_G0022514	-	100	61.050	Mus_caroli
MGP_PahariEiJ_G0014012	Rbm4b	100	99.440	MGP_CAROLIEiJ_G0022515	Rbm4b	100	99.440	Mus_caroli
MGP_PahariEiJ_G0014012	Rbm4b	100	86.704	MGP_CAROLIEiJ_G0022516	-	97	100.000	Mus_caroli
MGP_PahariEiJ_G0014012	Rbm4b	100	99.720	ENSMUSG00000033760	Rbm4b	100	99.720	Mus_musculus
MGP_PahariEiJ_G0014012	Rbm4b	100	86.150	ENSMUSG00000096370	Gm21992	100	85.596	Mus_musculus
MGP_PahariEiJ_G0014012	Rbm4b	100	86.150	ENSMUSG00000094936	Rbm4	100	100.000	Mus_musculus
MGP_PahariEiJ_G0014012	Rbm4b	100	91.786	MGP_SPRETEiJ_G0023429	-	100	91.786	Mus_spretus
MGP_PahariEiJ_G0014012	Rbm4b	100	68.111	MGP_SPRETEiJ_G0023428	-	94	67.492	Mus_spretus
MGP_PahariEiJ_G0014012	Rbm4b	100	68.111	MGP_SPRETEiJ_G0023430	-	100	67.492	Mus_spretus
MGP_PahariEiJ_G0014012	Rbm4b	100	96.100	ENSMPUG00000003450	RBM4B	100	96.100	Mustela_putorius_furo
MGP_PahariEiJ_G0014012	Rbm4b	100	85.205	ENSMPUG00000003443	RBM4	100	84.658	Mustela_putorius_furo
MGP_PahariEiJ_G0014012	Rbm4b	100	93.557	ENSMLUG00000001290	RBM4B	100	92.997	Myotis_lucifugus
MGP_PahariEiJ_G0014012	Rbm4b	99	83.702	ENSMLUG00000004076	RBM4	95	83.149	Myotis_lucifugus
MGP_PahariEiJ_G0014012	Rbm4b	100	97.199	ENSNGAG00000016292	Rbm4b	100	97.199	Nannospalax_galili
MGP_PahariEiJ_G0014012	Rbm4b	100	93.872	ENSNLEG00000006213	RBM4B	97	99.281	Nomascus_leucogenys
MGP_PahariEiJ_G0014012	Rbm4b	100	86.027	ENSNLEG00000035021	RBM4	97	98.551	Nomascus_leucogenys
MGP_PahariEiJ_G0014012	Rbm4b	100	86.777	ENSMEUG00000001445	-	100	86.501	Notamacropus_eugenii
MGP_PahariEiJ_G0014012	Rbm4b	61	78.414	ENSMEUG00000005739	-	100	77.533	Notamacropus_eugenii
MGP_PahariEiJ_G0014012	Rbm4b	100	85.753	ENSOPRG00000009149	RBM4	100	85.205	Ochotona_princeps
MGP_PahariEiJ_G0014012	Rbm4b	100	94.150	ENSOPRG00000009158	RBM4B	100	93.872	Ochotona_princeps
MGP_PahariEiJ_G0014012	Rbm4b	100	96.100	ENSODEG00000017696	-	100	96.100	Octodon_degus
MGP_PahariEiJ_G0014012	Rbm4b	100	71.309	ENSODEG00000001866	-	100	71.389	Octodon_degus
MGP_PahariEiJ_G0014012	Rbm4b	100	78.992	ENSOANG00000003143	-	84	77.933	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0014012	Rbm4b	100	86.313	ENSOANG00000011036	-	100	85.754	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0014012	Rbm4b	100	85.205	ENSOCUG00000004731	RBM4	100	84.658	Oryctolagus_cuniculus
MGP_PahariEiJ_G0014012	Rbm4b	100	96.657	ENSOCUG00000006695	LARK	100	96.657	Oryctolagus_cuniculus
MGP_PahariEiJ_G0014012	Rbm4b	100	85.792	ENSOGAG00000015647	RBM4	100	84.110	Otolemur_garnettii
MGP_PahariEiJ_G0014012	Rbm4b	100	96.379	ENSOGAG00000015648	RBM4B	100	96.379	Otolemur_garnettii
MGP_PahariEiJ_G0014012	Rbm4b	100	92.837	ENSOARG00000007759	RBM4B	100	93.664	Ovis_aries
MGP_PahariEiJ_G0014012	Rbm4b	100	85.635	ENSOARG00000007700	RBM4	100	85.083	Ovis_aries
MGP_PahariEiJ_G0014012	Rbm4b	100	96.100	ENSPPAG00000015125	RBM4B	97	99.281	Pan_paniscus
MGP_PahariEiJ_G0014012	Rbm4b	100	96.379	ENSPPRG00000003388	RBM4B	100	96.379	Panthera_pardus
MGP_PahariEiJ_G0014012	Rbm4b	100	85.479	ENSPPRG00000003533	RBM4	97	98.551	Panthera_pardus
MGP_PahariEiJ_G0014012	Rbm4b	100	79.558	ENSPTIG00000016180	RBM4	97	99.275	Panthera_tigris_altaica
MGP_PahariEiJ_G0014012	Rbm4b	100	96.379	ENSPTIG00000015426	RBM4B	100	96.379	Panthera_tigris_altaica
MGP_PahariEiJ_G0014012	Rbm4b	100	96.100	ENSPTRG00000003935	RBM4B	97	99.281	Pan_troglodytes
MGP_PahariEiJ_G0014012	Rbm4b	100	96.100	ENSPANG00000020672	RBM4B	97	99.281	Papio_anubis
MGP_PahariEiJ_G0014012	Rbm4b	100	75.538	ENSPSIG00000003430	-	100	74.394	Pelodiscus_sinensis
MGP_PahariEiJ_G0014012	Rbm4b	77	80.969	ENSPSIG00000003477	-	93	79.861	Pelodiscus_sinensis
MGP_PahariEiJ_G0014012	Rbm4b	100	98.603	ENSPEMG00000009144	Rbm4b	100	98.603	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0014012	Rbm4b	100	96.100	ENSPPYG00000003010	RBM4B	100	96.100	Pongo_abelii
MGP_PahariEiJ_G0014012	Rbm4b	100	84.932	ENSPPYG00000003012	RBM4	100	83.516	Pongo_abelii
MGP_PahariEiJ_G0014012	Rbm4b	100	85.753	ENSPCAG00000003393	-	100	85.205	Procavia_capensis
MGP_PahariEiJ_G0014012	Rbm4b	100	93.315	ENSPCOG00000027885	RBM4B	97	99.281	Propithecus_coquereli
MGP_PahariEiJ_G0014012	Rbm4b	100	95.822	ENSPVAG00000010487	RBM4B	100	95.822	Pteropus_vampyrus
MGP_PahariEiJ_G0014012	Rbm4b	100	85.205	ENSPVAG00000010486	RBM4	100	84.658	Pteropus_vampyrus
MGP_PahariEiJ_G0014012	Rbm4b	100	99.160	ENSRNOG00000061795	Rbm4b	100	99.160	Rattus_norvegicus
MGP_PahariEiJ_G0014012	Rbm4b	100	85.205	ENSRNOG00000050741	Rbm4	97	100.000	Rattus_norvegicus
MGP_PahariEiJ_G0014012	Rbm4b	100	96.100	ENSRBIG00000019394	RBM4B	97	99.281	Rhinopithecus_bieti
MGP_PahariEiJ_G0014012	Rbm4b	100	96.100	ENSRROG00000032850	RBM4B	97	99.281	Rhinopithecus_roxellana
MGP_PahariEiJ_G0014012	Rbm4b	100	95.822	ENSSBOG00000034474	RBM4B	100	95.822	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0014012	Rbm4b	100	87.151	ENSSHAG00000008386	-	100	86.872	Sarcophilus_harrisii
MGP_PahariEiJ_G0014012	Rbm4b	100	93.855	ENSSARG00000010710	RBM4B	100	93.575	Sorex_araneus
MGP_PahariEiJ_G0014012	Rbm4b	100	85.479	ENSSSCG00000032437	RBM4	100	84.932	Sus_scrofa
MGP_PahariEiJ_G0014012	Rbm4b	78	79.863	ENSTGUG00000016779	-	92	79.861	Taeniopygia_guttata
MGP_PahariEiJ_G0014012	Rbm4b	64	94.091	ENSTBEG00000003727	-	68	94.393	Tupaia_belangeri
MGP_PahariEiJ_G0014012	Rbm4b	100	95.798	ENSTBEG00000003748	RBM4B	100	95.798	Tupaia_belangeri
MGP_PahariEiJ_G0014012	Rbm4b	100	84.932	ENSTTRG00000011164	RBM4	100	84.384	Tursiops_truncatus
MGP_PahariEiJ_G0014012	Rbm4b	100	96.100	ENSTTRG00000011166	RBM4B	100	96.100	Tursiops_truncatus
MGP_PahariEiJ_G0014012	Rbm4b	100	96.100	ENSUAMG00000004745	RBM4B	100	96.100	Ursus_americanus
MGP_PahariEiJ_G0014012	Rbm4b	100	85.479	ENSUAMG00000014882	RBM4	97	98.551	Ursus_americanus
MGP_PahariEiJ_G0014012	Rbm4b	65	95.319	ENSUMAG00000011738	-	97	99.275	Ursus_maritimus
MGP_PahariEiJ_G0014012	Rbm4b	100	85.205	ENSVPAG00000001949	RBM4	100	84.658	Vicugna_pacos
MGP_PahariEiJ_G0014012	Rbm4b	100	95.822	ENSVPAG00000001950	RBM4B	100	95.822	Vicugna_pacos
MGP_PahariEiJ_G0014012	Rbm4b	100	84.932	ENSVVUG00000010622	RBM4	100	84.384	Vulpes_vulpes
MGP_PahariEiJ_G0014012	Rbm4b	100	96.100	ENSVVUG00000010619	RBM4B	100	96.100	Vulpes_vulpes