EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0014057 (Gene tree)
Gene ID: 110332966
Gene Symbol: Rnaseh2c
Alias: 1500026D16Rik
Full Name: ribonuclease H2 subunit C
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 1543 bases
Position: chr1:116996462-116998004
Accession: 110332966
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0020650	RNase_H2_suC	PF08615.11	9.8e-23	1	1
MGP_PahariEiJ_P0020653	RNase_H2_suC	PF08615.11	2.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0020652	-	763	-	-	- (aa)	-	-
MGP_PahariEiJ_T0020653	-	385	-	MGP_PahariEiJ_P0020653	84 (aa)	-	-
MGP_PahariEiJ_T0020650	-	1132	-	MGP_PahariEiJ_P0020650	163 (aa)	XP_021069989	UPI000A312394
MGP_PahariEiJ_T0020651	-	859	-	-	- (aa)	-	-
MGP_PahariEiJ_T0020654	-	272	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0014057's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0014057's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0014057	Rnaseh2c	100	66.867	ENSG00000172922	RNASEH2C	100	66.867	Homo_sapiens
MGP_PahariEiJ_G0014057	Rnaseh2c	100	66.860	ENSAMEG00000017348	RNASEH2C	100	66.860	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0014057	Rnaseh2c	99	70.588	ENSANAG00000032535	RNASEH2C	100	67.879	Aotus_nancymaae
MGP_PahariEiJ_G0014057	Rnaseh2c	100	64.458	ENSBTAG00000005577	RNASEH2C	100	64.458	Bos_taurus
MGP_PahariEiJ_G0014057	Rnaseh2c	99	68.235	ENSCJAG00000001965	RNASEH2C	100	66.061	Callithrix_jacchus
MGP_PahariEiJ_G0014057	Rnaseh2c	100	67.857	ENSCAFG00000013292	RNASEH2C	100	67.857	Canis_familiaris
MGP_PahariEiJ_G0014057	Rnaseh2c	100	67.857	ENSCAFG00020015077	RNASEH2C	100	67.857	Canis_lupus_dingo
MGP_PahariEiJ_G0014057	Rnaseh2c	100	63.855	ENSCHIG00000013681	RNASEH2C	100	64.458	Capra_hircus
MGP_PahariEiJ_G0014057	Rnaseh2c	99	67.442	ENSTSYG00000028658	-	65	71.296	Carlito_syrichta
MGP_PahariEiJ_G0014057	Rnaseh2c	100	65.060	ENSCPOG00000013696	RNASEH2C	100	65.060	Cavia_porcellus
MGP_PahariEiJ_G0014057	Rnaseh2c	99	69.412	ENSCCAG00000025461	RNASEH2C	100	67.273	Cebus_capucinus
MGP_PahariEiJ_G0014057	Rnaseh2c	99	70.909	ENSCLAG00000016534	RNASEH2C	99	70.909	Chinchilla_lanigera
MGP_PahariEiJ_G0014057	Rnaseh2c	100	68.072	ENSCSAG00000007985	RNASEH2C	100	68.072	Chlorocebus_sabaeus
MGP_PahariEiJ_G0014057	Rnaseh2c	100	66.265	ENSCANG00000039373	RNASEH2C	100	66.265	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0014057	Rnaseh2c	99	87.209	ENSCGRG00001015383	Rnaseh2c	100	84.940	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0014057	Rnaseh2c	99	87.209	ENSCGRG00000012179	Rnaseh2c	100	84.940	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0014057	Rnaseh2c	100	66.667	ENSDNOG00000035155	RNASEH2C	99	66.667	Dasypus_novemcinctus
MGP_PahariEiJ_G0014057	Rnaseh2c	100	69.277	ENSDORG00000023624	Rnaseh2c	100	69.277	Dipodomys_ordii
MGP_PahariEiJ_G0014057	Rnaseh2c	61	59.000	ENSETEG00000015293	-	94	59.000	Echinops_telfairi
MGP_PahariEiJ_G0014057	Rnaseh2c	99	58.427	ENSETEG00000020048	-	100	64.844	Echinops_telfairi
MGP_PahariEiJ_G0014057	Rnaseh2c	100	63.855	ENSEASG00005004302	RNASEH2C	100	64.458	Equus_asinus_asinus
MGP_PahariEiJ_G0014057	Rnaseh2c	100	64.458	ENSECAG00000017289	RNASEH2C	100	65.060	Equus_caballus
MGP_PahariEiJ_G0014057	Rnaseh2c	100	72.727	ENSFCAG00000044095	RNASEH2C	100	72.727	Felis_catus
MGP_PahariEiJ_G0014057	Rnaseh2c	99	66.279	ENSFDAG00000011974	RNASEH2C	97	61.404	Fukomys_damarensis
MGP_PahariEiJ_G0014057	Rnaseh2c	100	66.667	ENSHGLG00000013478	RNASEH2C	100	66.667	Heterocephalus_glaber_female
MGP_PahariEiJ_G0014057	Rnaseh2c	100	66.667	ENSHGLG00100019352	RNASEH2C	100	66.667	Heterocephalus_glaber_male
MGP_PahariEiJ_G0014057	Rnaseh2c	100	69.364	ENSSTOG00000019410	RNASEH2C	100	69.364	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0014057	Rnaseh2c	99	74.118	ENSJJAG00000019320	Rnaseh2c	94	77.419	Jaculus_jaculus
MGP_PahariEiJ_G0014057	Rnaseh2c	100	62.130	ENSLAFG00000015641	RNASEH2C	100	62.130	Loxodonta_africana
MGP_PahariEiJ_G0014057	Rnaseh2c	100	66.867	ENSMFAG00000042754	-	100	66.867	Macaca_fascicularis
MGP_PahariEiJ_G0014057	Rnaseh2c	100	68.072	ENSMFAG00000038096	-	100	68.072	Macaca_fascicularis
MGP_PahariEiJ_G0014057	Rnaseh2c	100	67.273	ENSMMUG00000016234	-	100	67.273	Macaca_mulatta
MGP_PahariEiJ_G0014057	Rnaseh2c	99	68.235	ENSMMUG00000019837	RNASEH2C	74	65.031	Macaca_mulatta
MGP_PahariEiJ_G0014057	Rnaseh2c	100	68.072	ENSMNEG00000040939	RNASEH2C	100	68.072	Macaca_nemestrina
MGP_PahariEiJ_G0014057	Rnaseh2c	99	88.372	ENSMAUG00000016346	Rnaseh2c	100	87.349	Mesocricetus_auratus
MGP_PahariEiJ_G0014057	Rnaseh2c	100	68.862	ENSMICG00000008882	RNASEH2C	100	68.862	Microcebus_murinus
MGP_PahariEiJ_G0014057	Rnaseh2c	100	84.337	ENSMOCG00000013231	Rnaseh2c	100	84.337	Microtus_ochrogaster
MGP_PahariEiJ_G0014057	Rnaseh2c	99	46.988	ENSMODG00000009547	-	90	51.020	Monodelphis_domestica
MGP_PahariEiJ_G0014057	Rnaseh2c	100	95.181	MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	95.181	Mus_caroli
MGP_PahariEiJ_G0014057	Rnaseh2c	100	97.590	ENSMUSG00000024925	Rnaseh2c	100	97.590	Mus_musculus
MGP_PahariEiJ_G0014057	Rnaseh2c	100	63.006	ENSMPUG00000011629	RNASEH2C	100	63.584	Mustela_putorius_furo
MGP_PahariEiJ_G0014057	Rnaseh2c	100	62.130	ENSMLUG00000008777	RNASEH2C	100	62.130	Myotis_lucifugus
MGP_PahariEiJ_G0014057	Rnaseh2c	100	66.871	ENSNGAG00000020391	Rnaseh2c	100	66.871	Nannospalax_galili
MGP_PahariEiJ_G0014057	Rnaseh2c	99	68.235	ENSNLEG00000005833	-	100	65.455	Nomascus_leucogenys
MGP_PahariEiJ_G0014057	Rnaseh2c	98	45.000	ENSMEUG00000006205	-	100	45.000	Notamacropus_eugenii
MGP_PahariEiJ_G0014057	Rnaseh2c	100	67.470	ENSODEG00000017806	RNASEH2C	100	67.470	Octodon_degus
MGP_PahariEiJ_G0014057	Rnaseh2c	100	67.630	ENSOGAG00000014128	RNASEH2C	100	67.630	Otolemur_garnettii
MGP_PahariEiJ_G0014057	Rnaseh2c	100	63.253	ENSOARG00000017675	RNASEH2C	100	63.855	Ovis_aries
MGP_PahariEiJ_G0014057	Rnaseh2c	99	67.059	ENSPPAG00000042592	-	84	64.072	Pan_paniscus
MGP_PahariEiJ_G0014057	Rnaseh2c	100	71.515	ENSPPRG00000000774	RNASEH2C	100	71.515	Panthera_pardus
MGP_PahariEiJ_G0014057	Rnaseh2c	100	69.091	ENSPTIG00000011677	RNASEH2C	100	69.091	Panthera_tigris_altaica
MGP_PahariEiJ_G0014057	Rnaseh2c	100	67.470	ENSPTRG00000038742	RNASEH2C	100	67.470	Pan_troglodytes
MGP_PahariEiJ_G0014057	Rnaseh2c	99	68.235	ENSPANG00000015965	RNASEH2C	66	64.417	Papio_anubis
MGP_PahariEiJ_G0014057	Rnaseh2c	99	89.535	ENSPEMG00000018577	Rnaseh2c	100	86.747	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0014057	Rnaseh2c	99	68.235	ENSPPYG00000003051	RNASEH2C	100	66.265	Pongo_abelii
MGP_PahariEiJ_G0014057	Rnaseh2c	100	61.047	ENSPCAG00000007887	RNASEH2C	100	61.047	Procavia_capensis
MGP_PahariEiJ_G0014057	Rnaseh2c	100	68.862	ENSPCOG00000021092	RNASEH2C	100	68.862	Propithecus_coquereli
MGP_PahariEiJ_G0014057	Rnaseh2c	100	68.485	ENSPVAG00000016950	RNASEH2C	100	68.485	Pteropus_vampyrus
MGP_PahariEiJ_G0014057	Rnaseh2c	100	93.976	ENSRNOG00000020700	Rnaseh2c	100	93.976	Rattus_norvegicus
MGP_PahariEiJ_G0014057	Rnaseh2c	99	68.235	ENSRBIG00000040124	RNASEH2C	64	66.038	Rhinopithecus_bieti
MGP_PahariEiJ_G0014057	Rnaseh2c	99	68.235	ENSRROG00000044910	RNASEH2C	99	66.456	Rhinopithecus_roxellana
MGP_PahariEiJ_G0014057	Rnaseh2c	100	67.879	ENSSBOG00000034781	RNASEH2C	100	67.879	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0014057	Rnaseh2c	100	66.071	ENSSSCG00000012979	RNASEH2C	100	66.071	Sus_scrofa
MGP_PahariEiJ_G0014057	Rnaseh2c	97	50.610	ENSTTRG00000016928	RNASEH2C	99	50.610	Tursiops_truncatus
MGP_PahariEiJ_G0014057	Rnaseh2c	100	66.279	ENSUAMG00000020793	RNASEH2C	100	66.279	Ursus_americanus
MGP_PahariEiJ_G0014057	Rnaseh2c	100	65.698	ENSUMAG00000010791	RNASEH2C	100	65.698	Ursus_maritimus
MGP_PahariEiJ_G0014057	Rnaseh2c	99	66.279	ENSVPAG00000006579	RNASEH2C	100	61.392	Vicugna_pacos
MGP_PahariEiJ_G0014057	Rnaseh2c	96	63.975	ENSVVUG00000027076	RNASEH2C	77	63.975	Vulpes_vulpes