EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_PahariEiJ_G0014334 (Gene tree)
Gene ID
110336025
Gene Symbol
Smarca2
Alias
2610209L14Rik|Snf2l2|brm
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type
protein_coding
Species
Mus_pahari
Status
putative
Strand
Plus strand
Length
173101 bases
Position
chr1:138178150-138351250
Accession
110336025
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_PahariEiJ_P0021403ResIIIPF04851.153.7e-0811
MGP_PahariEiJ_P0021404ResIIIPF04851.153.8e-0811
MGP_PahariEiJ_P0021406ResIIIPF04851.152e-0611
MGP_PahariEiJ_P0021406BRKPF07533.164.2e-1711
MGP_PahariEiJ_P0021403BRKPF07533.164.3e-1711
MGP_PahariEiJ_P0021404BRKPF07533.164.4e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_PahariEiJ_T0021408-668--- (aa)--
MGP_PahariEiJ_T0021409-1584--- (aa)--
MGP_PahariEiJ_T0021403-5846XM_021218452MGP_PahariEiJ_P00214031579 (aa)XP_021074111UPI000A306B6D
MGP_PahariEiJ_T0021404-5850XM_021218448MGP_PahariEiJ_P00214041597 (aa)XP_021074107UPI000A3080A5
MGP_PahariEiJ_T0021405-5899-MGP_PahariEiJ_P00214051506 (aa)--
MGP_PahariEiJ_T0021406-4566-MGP_PahariEiJ_P00214061521 (aa)--
MGP_PahariEiJ_T0021407-634-MGP_PahariEiJ_P0021407169 (aa)--
MGP_PahariEiJ_T0021417-835-MGP_PahariEiJ_P0021417235 (aa)--
MGP_PahariEiJ_T0021416-879-MGP_PahariEiJ_P0021416276 (aa)XP_021074116UPI000A312ADD
MGP_PahariEiJ_T0021415-1858XM_021218470MGP_PahariEiJ_P0021415236 (aa)XP_021074129UPI000A3048DB
MGP_PahariEiJ_T0021414-788-MGP_PahariEiJ_P0021414224 (aa)--
MGP_PahariEiJ_T0021413-942-MGP_PahariEiJ_P0021413254 (aa)--
MGP_PahariEiJ_T0021412-929-MGP_PahariEiJ_P0021412254 (aa)--
MGP_PahariEiJ_T0021411-426--- (aa)--
MGP_PahariEiJ_T0021410-868--- (aa)--
MGP_PahariEiJ_T0021420-983-MGP_PahariEiJ_P0021420119 (aa)-UPI00000E78BF
MGP_PahariEiJ_T0021421-735-MGP_PahariEiJ_P0021421119 (aa)-UPI00000E78BF
MGP_PahariEiJ_T0021419-1460-MGP_PahariEiJ_P0021419113 (aa)--
MGP_PahariEiJ_T0021418-490-MGP_PahariEiJ_P002141883 (aa)--
Gene Model
Click here to download MGP_PahariEiJ_G0014334's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0014334's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_PahariEiJ_G0014334Smarca28182.063MGP_PahariEiJ_G0014745Smarca49379.641
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_PahariEiJ_G0014334Smarca210097.150ENSG00000080503SMARCA210099.329Homo_sapiens
MGP_PahariEiJ_G0014334Smarca210079.812ENSAPOG00000002641SMARCA29780.206Acanthochromis_polyacanthus
MGP_PahariEiJ_G0014334Smarca29488.595ENSAMEG00000012325SMARCA210098.513Ailuropoda_melanoleuca
MGP_PahariEiJ_G0014334Smarca210078.594ENSACIG00000015607SMARCA29779.577Amphilophus_citrinellus
MGP_PahariEiJ_G0014334Smarca210079.426ENSAOCG00000009647-9681.042Amphiprion_ocellaris
MGP_PahariEiJ_G0014334Smarca210079.875ENSAPEG00000007646SMARCA29680.977Amphiprion_percula
MGP_PahariEiJ_G0014334Smarca29980.838ENSATEG00000006916SMARCA28086.516Anabas_testudineus
MGP_PahariEiJ_G0014334Smarca29887.643ENSAPLG00000013873SMARCA28997.904Anas_platyrhynchos
MGP_PahariEiJ_G0014334Smarca210089.029ENSACAG00000002423SMARCA210089.051Anolis_carolinensis
MGP_PahariEiJ_G0014334Smarca210096.643ENSANAG00000026498SMARCA210096.643Aotus_nancymaae
MGP_PahariEiJ_G0014334Smarca210080.377ENSACLG00000004248SMARCA29781.032Astatotilapia_calliptera
MGP_PahariEiJ_G0014334Smarca210081.269ENSAMXG00000012404smarca29782.001Astyanax_mexicanus
MGP_PahariEiJ_G0014334Smarca210095.693ENSBTAG00000007494SMARCA210095.693Bos_taurus
MGP_PahariEiJ_G0014334Smarca29997.064ENSCJAG00000010710SMARCA29997.017Callithrix_jacchus
MGP_PahariEiJ_G0014334Smarca210095.947ENSCAFG00000002013SMARCA210095.947Canis_familiaris
MGP_PahariEiJ_G0014334Smarca27794.412ENSCAFG00020026802SMARCA29894.412Canis_lupus_dingo
MGP_PahariEiJ_G0014334Smarca210095.693ENSCHIG00000025863SMARCA210095.693Capra_hircus
MGP_PahariEiJ_G0014334Smarca210096.575ENSTSYG00000003858SMARCA210096.575Carlito_syrichta
MGP_PahariEiJ_G0014334Smarca29992.371ENSCAPG00000002890SMARCA29992.391Cavia_aperea
MGP_PahariEiJ_G0014334Smarca210096.137ENSCPOG00000005475SMARCA210096.137Cavia_porcellus
MGP_PahariEiJ_G0014334Smarca210096.770ENSCCAG00000030636SMARCA210096.770Cebus_capucinus
MGP_PahariEiJ_G0014334Smarca210096.331ENSCATG00000031470SMARCA210096.331Cercocebus_atys
MGP_PahariEiJ_G0014334Smarca210096.707ENSCLAG00000014484SMARCA210096.707Chinchilla_lanigera
MGP_PahariEiJ_G0014334Smarca29496.682ENSCSAG00000008650SMARCA29996.682Chlorocebus_sabaeus
MGP_PahariEiJ_G0014334Smarca28790.162ENSCHOG00000004316SMARCA28790.162Choloepus_hoffmanni
MGP_PahariEiJ_G0014334Smarca210090.221ENSCPBG00000025463SMARCA210094.809Chrysemys_picta_bellii
MGP_PahariEiJ_G0014334Smarca210096.833ENSCANG00000039597SMARCA210096.833Colobus_angolensis_palliatus
MGP_PahariEiJ_G0014334Smarca210090.733ENSCGRG00001002323Smarca210090.625Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0014334Smarca29976.923ENSCSEG00000019311SMARCA29677.143Cynoglossus_semilaevis
MGP_PahariEiJ_G0014334Smarca28978.951ENSCVAG00000016571SMARCA27785.143Cyprinodon_variegatus
MGP_PahariEiJ_G0014334Smarca210081.595ENSDARG00000008904smarca29781.548Danio_rerio
MGP_PahariEiJ_G0014334Smarca210094.557ENSDNOG00000006402SMARCA210094.873Dasypus_novemcinctus
MGP_PahariEiJ_G0014334Smarca210096.833ENSDORG00000014832Smarca210096.833Dipodomys_ordii
MGP_PahariEiJ_G0014334Smarca27953.196FBgn0000212brm7163.131Drosophila_melanogaster
MGP_PahariEiJ_G0014334Smarca29371.702ENSEBUG00000011442-9873.302Eptatretus_burgeri
MGP_PahariEiJ_G0014334Smarca27865.542ENSEBUG00000002449-9065.019Eptatretus_burgeri
MGP_PahariEiJ_G0014334Smarca210095.883ENSEASG00005010312SMARCA210095.883Equus_asinus_asinus
MGP_PahariEiJ_G0014334Smarca26697.222ENSEEUG00000015540-6897.222Erinaceus_europaeus
MGP_PahariEiJ_G0014334Smarca29280.432ENSELUG00000010318smarca29679.155Esox_lucius
MGP_PahariEiJ_G0014334Smarca210095.313ENSFCAG00000001568SMARCA210095.313Felis_catus
MGP_PahariEiJ_G0014334Smarca210090.662ENSFALG00000010416SMARCA29095.038Ficedula_albicollis
MGP_PahariEiJ_G0014334Smarca210094.583ENSFDAG00000010502SMARCA210094.396Fukomys_damarensis
MGP_PahariEiJ_G0014334Smarca29980.808ENSFHEG00000021250SMARCA29681.113Fundulus_heteroclitus
MGP_PahariEiJ_G0014334Smarca29877.492ENSGMOG00000014229SMARCA29777.612Gadus_morhua
MGP_PahariEiJ_G0014334Smarca210091.456ENSGALG00000010164SMARCA210091.203Gallus_gallus
MGP_PahariEiJ_G0014334Smarca29576.373ENSGAFG00000001164SMARCA29376.547Gambusia_affinis
MGP_PahariEiJ_G0014334Smarca29979.164ENSGACG00000014488SMARCA29779.140Gasterosteus_aculeatus
MGP_PahariEiJ_G0014334Smarca210090.347ENSGAGG00000024412SMARCA210090.886Gopherus_agassizii
MGP_PahariEiJ_G0014334Smarca29598.937ENSGGOG00000000513SMARCA210096.680Gorilla_gorilla
MGP_PahariEiJ_G0014334Smarca210079.564ENSHBUG00000006691SMARCA29780.488Haplochromis_burtoni
MGP_PahariEiJ_G0014334Smarca29996.563ENSHGLG00000005215SMARCA29996.563Heterocephalus_glaber_female
MGP_PahariEiJ_G0014334Smarca210095.440ENSHGLG00100010496SMARCA210095.440Heterocephalus_glaber_male
MGP_PahariEiJ_G0014334Smarca26786.337ENSHCOG00000015348-7486.040Hippocampus_comes
MGP_PahariEiJ_G0014334Smarca210079.988ENSIPUG00000011060smarca29778.688Ictalurus_punctatus
MGP_PahariEiJ_G0014334Smarca210097.150ENSSTOG00000006812SMARCA210097.150Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0014334Smarca210097.087ENSJJAG00000010867Smarca210097.087Jaculus_jaculus
MGP_PahariEiJ_G0014334Smarca29980.252ENSKMAG00000015844-9680.814Kryptolebias_marmoratus
MGP_PahariEiJ_G0014334Smarca25172.180ENSLACG00000000270SMARCA28386.373Latimeria_chalumnae
MGP_PahariEiJ_G0014334Smarca29883.185ENSLOCG00000011499smarca28188.574Lepisosteus_oculatus
MGP_PahariEiJ_G0014334Smarca210094.003ENSLAFG00000014061SMARCA210093.196Loxodonta_africana
MGP_PahariEiJ_G0014334Smarca210095.429ENSMFAG00000003814SMARCA210095.429Macaca_fascicularis
MGP_PahariEiJ_G0014334Smarca210096.833ENSMMUG00000015279SMARCA210096.833Macaca_mulatta
MGP_PahariEiJ_G0014334Smarca210096.268ENSMNEG00000041069SMARCA210096.268Macaca_nemestrina
MGP_PahariEiJ_G0014334Smarca210094.364ENSMLEG00000027418SMARCA210094.364Mandrillus_leucophaeus
MGP_PahariEiJ_G0014334Smarca210081.017ENSMAMG00000003056SMARCA29781.481Mastacembelus_armatus
MGP_PahariEiJ_G0014334Smarca210080.062ENSMZEG00005020709SMARCA29780.707Maylandia_zebra
MGP_PahariEiJ_G0014334Smarca28077.689ENSMGAG00000005160-10077.556Meleagris_gallopavo
MGP_PahariEiJ_G0014334Smarca210096.137ENSMICG00000005162SMARCA210096.073Microcebus_murinus
MGP_PahariEiJ_G0014334Smarca210098.292ENSMOCG00000001611Smarca210098.292Microtus_ochrogaster
MGP_PahariEiJ_G0014334Smarca29978.060ENSMMOG00000014196SMARCA29678.814Mola_mola
MGP_PahariEiJ_G0014334Smarca210091.061ENSMODG00000003578SMARCA210091.124Monodelphis_domestica
MGP_PahariEiJ_G0014334Smarca29980.587ENSMALG00000009611SMARCA29680.878Monopterus_albus
MGP_PahariEiJ_G0014334Smarca210099.306MGP_CAROLIEiJ_G0022841Smarca210099.306Mus_caroli
MGP_PahariEiJ_G0014334Smarca210099.179ENSMUSG00000024921Smarca210099.179Mus_musculus
MGP_PahariEiJ_G0014334Smarca210099.179MGP_SPRETEiJ_G0023759Smarca210099.179Mus_spretus
MGP_PahariEiJ_G0014334Smarca28098.517ENSMPUG00000005171SMARCA29498.517Mustela_putorius_furo
MGP_PahariEiJ_G0014334Smarca29990.201ENSMLUG00000002342SMARCA28293.185Myotis_lucifugus
MGP_PahariEiJ_G0014334Smarca29995.990ENSNGAG00000000108Smarca29995.990Nannospalax_galili
MGP_PahariEiJ_G0014334Smarca29567.630ENSNBRG00000017998SMARCA29483.085Neolamprologus_brichardi
MGP_PahariEiJ_G0014334Smarca210093.987ENSNLEG00000008575SMARCA210093.987Nomascus_leucogenys
MGP_PahariEiJ_G0014334Smarca210084.346ENSMEUG00000009812SMARCA210084.408Notamacropus_eugenii
MGP_PahariEiJ_G0014334Smarca29897.872ENSOPRG00000013474SMARCA29497.872Ochotona_princeps
MGP_PahariEiJ_G0014334Smarca29995.412ENSODEG00000005452SMARCA29995.412Octodon_degus
MGP_PahariEiJ_G0014334Smarca29980.353ENSONIG00000014163SMARCA29681.008Oreochromis_niloticus
MGP_PahariEiJ_G0014334Smarca25194.223ENSOANG00000008299-9597.978Ornithorhynchus_anatinus
MGP_PahariEiJ_G0014334Smarca210096.030ENSOCUG00000006320SMARCA210096.030Oryctolagus_cuniculus
MGP_PahariEiJ_G0014334Smarca210079.562ENSORLG00000020820SMARCA29680.612Oryzias_latipes
MGP_PahariEiJ_G0014334Smarca210079.612ENSORLG00015006289SMARCA29680.809Oryzias_latipes_hsok
MGP_PahariEiJ_G0014334Smarca29980.408ENSOMEG00000009736-9680.694Oryzias_melastigma
MGP_PahariEiJ_G0014334Smarca29992.226ENSOGAG00000017053SMARCA29992.830Otolemur_garnettii
MGP_PahariEiJ_G0014334Smarca210094.304ENSOARG00000013265SMARCA210094.304Ovis_aries
MGP_PahariEiJ_G0014334Smarca210092.654ENSPPAG00000038717SMARCA210093.387Pan_paniscus
MGP_PahariEiJ_G0014334Smarca210095.377ENSPPRG00000001879SMARCA210095.377Panthera_pardus
MGP_PahariEiJ_G0014334Smarca210095.250ENSPTRG00000051168SMARCA210094.870Pan_troglodytes
MGP_PahariEiJ_G0014334Smarca210089.646ENSPANG00000025121SMARCA210089.583Papio_anubis
MGP_PahariEiJ_G0014334Smarca210081.962ENSPKIG00000018469-9781.558Paramormyrops_kingsleyae
MGP_PahariEiJ_G0014334Smarca210089.755ENSPSIG00000006284SMARCA210090.576Pelodiscus_sinensis
MGP_PahariEiJ_G0014334Smarca29873.571ENSPMGG00000013696-9674.870Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0014334Smarca210097.996ENSPEMG00000019821Smarca210097.996Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0014334Smarca29471.793ENSPMAG00000005337-7878.348Petromyzon_marinus
MGP_PahariEiJ_G0014334Smarca210092.464ENSPCIG00000015658SMARCA210092.527Phascolarctos_cinereus
MGP_PahariEiJ_G0014334Smarca29979.874ENSPFOG00000001856SMARCA29680.428Poecilia_formosa
MGP_PahariEiJ_G0014334Smarca29979.373ENSPLAG00000017829SMARCA29577.022Poecilia_latipinna
MGP_PahariEiJ_G0014334Smarca29979.423ENSPMEG00000001815-9677.720Poecilia_mexicana
MGP_PahariEiJ_G0014334Smarca29979.498ENSPREG00000013800SMARCA29578.493Poecilia_reticulata
MGP_PahariEiJ_G0014334Smarca210096.263ENSPPYG00000019258SMARCA210096.263Pongo_abelii
MGP_PahariEiJ_G0014334Smarca27983.489ENSPCAG00000016969SMARCA27884.051Procavia_capensis
MGP_PahariEiJ_G0014334Smarca210094.051ENSPCOG00000025709SMARCA210093.984Propithecus_coquereli
MGP_PahariEiJ_G0014334Smarca29195.977ENSPVAG00000000901SMARCA29595.789Pteropus_vampyrus
MGP_PahariEiJ_G0014334Smarca210076.500ENSPNYG00000004533SMARCA29776.958Pundamilia_nyererei
MGP_PahariEiJ_G0014334Smarca29982.249ENSPNAG00000014635smarca28187.790Pygocentrus_nattereri
MGP_PahariEiJ_G0014334Smarca210098.686ENSRNOG00000011931Smarca210098.686Rattus_norvegicus
MGP_PahariEiJ_G0014334Smarca210094.934ENSRBIG00000038618SMARCA210094.934Rhinopithecus_bieti
MGP_PahariEiJ_G0014334Smarca210095.679ENSRROG00000019271SMARCA210095.679Rhinopithecus_roxellana
MGP_PahariEiJ_G0014334Smarca210092.668ENSSBOG00000034827SMARCA210092.731Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0014334Smarca210090.689ENSSHAG00000007884SMARCA210090.932Sarcophilus_harrisii
MGP_PahariEiJ_G0014334Smarca29782.877ENSSFOG00015014870SMARCA29782.746Scleropages_formosus
MGP_PahariEiJ_G0014334Smarca210079.452ENSSMAG00000013707SMARCA29680.519Scophthalmus_maximus
MGP_PahariEiJ_G0014334Smarca29979.975ENSSDUG00000008852-9880.639Seriola_dumerili
MGP_PahariEiJ_G0014334Smarca29980.216ENSSLDG00000025449SMARCA29680.416Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0014334Smarca29695.977ENSSARG00000007888SMARCA29595.263Sorex_araneus
MGP_PahariEiJ_G0014334Smarca29586.578ENSSPUG00000001629SMARCA28690.653Sphenodon_punctatus
MGP_PahariEiJ_G0014334Smarca210079.639ENSSPAG00000020091-9780.051Stegastes_partitus
MGP_PahariEiJ_G0014334Smarca210095.503ENSSSCG00000005232SMARCA210095.503Sus_scrofa
MGP_PahariEiJ_G0014334Smarca29890.427ENSTGUG00000005460SMARCA28394.656Taeniopygia_guttata
MGP_PahariEiJ_G0014334Smarca29979.886ENSTRUG00000015619SMARCA29679.922Takifugu_rubripes
MGP_PahariEiJ_G0014334Smarca26899.156ENSTBEG00000008767SMARCA27499.156Tupaia_belangeri
MGP_PahariEiJ_G0014334Smarca29594.521ENSTTRG00000002033SMARCA29594.653Tursiops_truncatus
MGP_PahariEiJ_G0014334Smarca29790.041ENSUAMG00000024701SMARCA29993.603Ursus_americanus
MGP_PahariEiJ_G0014334Smarca29286.671ENSVPAG00000001204SMARCA210086.671Vicugna_pacos
MGP_PahariEiJ_G0014334Smarca27695.413ENSVVUG00000004598SMARCA29995.413Vulpes_vulpes
MGP_PahariEiJ_G0014334Smarca210083.106ENSXETG00000015299smarca28287.226Xenopus_tropicalis
MGP_PahariEiJ_G0014334Smarca29378.947ENSXCOG00000011073SMARCA29779.522Xiphophorus_couchianus
MGP_PahariEiJ_G0014334Smarca29978.974ENSXMAG00000015611SMARCA29579.454Xiphophorus_maculatus

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