EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0014338 (Gene tree)
Gene ID: 110317790
Gene Symbol: Pum3
Alias: 1110069H02Rik|D19Bwg1357e
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 41186 bases
Position: chr1:138941953-138983138
Accession: 110317790
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0021431	CPL	PF08144.11	2.5e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0021431	-	3489	XM_021192558	MGP_PahariEiJ_P0021431	648 (aa)	XP_021048217	UPI000A308620

Gene Model

Click here to download MGP_PahariEiJ_G0014338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0014338's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0014338	Pum3	99	90.123	ENSG00000080608	PUM3	100	90.123	Homo_sapiens
MGP_PahariEiJ_G0014338	Pum3	89	56.114	ENSAPOG00000020252	pum3	99	53.021	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0014338	Pum3	99	89.474	ENSAMEG00000012187	PUM3	99	89.474	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0014338	Pum3	86	54.367	ENSACIG00000009786	pum3	88	55.577	Amphilophus_citrinellus
MGP_PahariEiJ_G0014338	Pum3	99	53.811	ENSAOCG00000004439	pum3	99	53.404	Amphiprion_ocellaris
MGP_PahariEiJ_G0014338	Pum3	99	53.811	ENSAPEG00000020523	pum3	99	53.404	Amphiprion_percula
MGP_PahariEiJ_G0014338	Pum3	82	61.495	ENSATEG00000005799	pum3	98	55.363	Anabas_testudineus
MGP_PahariEiJ_G0014338	Pum3	96	72.947	ENSAPLG00000002920	PUM3	99	72.947	Anas_platyrhynchos
MGP_PahariEiJ_G0014338	Pum3	93	67.107	ENSACAG00000003174	PUM3	99	68.937	Anolis_carolinensis
MGP_PahariEiJ_G0014338	Pum3	99	90.726	ENSANAG00000024520	PUM3	100	90.726	Aotus_nancymaae
MGP_PahariEiJ_G0014338	Pum3	99	54.688	ENSACLG00000001017	pum3	95	54.688	Astatotilapia_calliptera
MGP_PahariEiJ_G0014338	Pum3	94	62.739	ENSAMXG00000020911	pum3	99	62.679	Astyanax_mexicanus
MGP_PahariEiJ_G0014338	Pum3	99	89.009	ENSBTAG00000013357	PUM3	99	89.009	Bos_taurus
MGP_PahariEiJ_G0014338	Pum3	75	31.791	WBGene00014165	puf-12	64	31.791	Caenorhabditis_elegans
MGP_PahariEiJ_G0014338	Pum3	99	89.954	ENSCJAG00000010917	PUM3	100	89.954	Callithrix_jacchus
MGP_PahariEiJ_G0014338	Pum3	99	88.872	ENSCAFG00000002035	PUM3	99	88.872	Canis_familiaris
MGP_PahariEiJ_G0014338	Pum3	99	88.717	ENSCAFG00020026867	PUM3	99	88.717	Canis_lupus_dingo
MGP_PahariEiJ_G0014338	Pum3	99	88.700	ENSCHIG00000021559	PUM3	99	88.700	Capra_hircus
MGP_PahariEiJ_G0014338	Pum3	99	88.235	ENSTSYG00000007481	PUM3	99	88.235	Carlito_syrichta
MGP_PahariEiJ_G0014338	Pum3	99	84.722	ENSCAPG00000010592	-	99	84.722	Cavia_aperea
MGP_PahariEiJ_G0014338	Pum3	99	86.399	ENSCPOG00000008552	-	99	86.399	Cavia_porcellus
MGP_PahariEiJ_G0014338	Pum3	99	90.108	ENSCCAG00000032650	PUM3	100	90.108	Cebus_capucinus
MGP_PahariEiJ_G0014338	Pum3	99	90.417	ENSCATG00000024880	PUM3	100	90.417	Cercocebus_atys
MGP_PahariEiJ_G0014338	Pum3	99	89.181	ENSCLAG00000011892	PUM3	99	89.181	Chinchilla_lanigera
MGP_PahariEiJ_G0014338	Pum3	99	90.572	ENSCSAG00000008691	PUM3	100	90.572	Chlorocebus_sabaeus
MGP_PahariEiJ_G0014338	Pum3	99	68.161	ENSCHOG00000002535	PUM3	95	68.161	Choloepus_hoffmanni
MGP_PahariEiJ_G0014338	Pum3	99	71.827	ENSCPBG00000025470	PUM3	95	71.827	Chrysemys_picta_bellii
MGP_PahariEiJ_G0014338	Pum3	78	40.755	ENSCING00000024199	-	87	41.141	Ciona_intestinalis
MGP_PahariEiJ_G0014338	Pum3	80	41.445	ENSCSAVG00000006072	-	99	40.762	Ciona_savignyi
MGP_PahariEiJ_G0014338	Pum3	99	90.726	ENSCANG00000006142	PUM3	100	90.726	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0014338	Pum3	99	93.509	ENSCGRG00001016402	Pum3	99	93.509	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0014338	Pum3	99	93.509	ENSCGRG00000010207	Pum3	99	93.509	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0014338	Pum3	89	56.849	ENSCSEG00000001565	pum3	99	56.604	Cynoglossus_semilaevis
MGP_PahariEiJ_G0014338	Pum3	62	50.370	ENSCVAG00000006550	pum3	95	50.368	Cyprinodon_variegatus
MGP_PahariEiJ_G0014338	Pum3	99	64.062	ENSDARG00000087779	pum3	97	62.187	Danio_rerio
MGP_PahariEiJ_G0014338	Pum3	99	75.846	ENSDNOG00000008157	PUM3	70	76.235	Dasypus_novemcinctus
MGP_PahariEiJ_G0014338	Pum3	81	82.700	ENSETEG00000015331	PUM3	81	82.700	Echinops_telfairi
MGP_PahariEiJ_G0014338	Pum3	80	40.643	ENSEBUG00000011586	pum3	76	41.373	Eptatretus_burgeri
MGP_PahariEiJ_G0014338	Pum3	99	90.881	ENSEASG00005010350	PUM3	100	90.881	Equus_asinus_asinus
MGP_PahariEiJ_G0014338	Pum3	99	90.881	ENSECAG00000017193	PUM3	100	90.881	Equus_caballus
MGP_PahariEiJ_G0014338	Pum3	93	80.100	ENSEEUG00000010314	PUM3	100	80.100	Erinaceus_europaeus
MGP_PahariEiJ_G0014338	Pum3	96	61.672	ENSELUG00000002215	pum3	98	61.672	Esox_lucius
MGP_PahariEiJ_G0014338	Pum3	99	71.429	ENSFALG00000010509	PUM3	99	71.429	Ficedula_albicollis
MGP_PahariEiJ_G0014338	Pum3	99	88.545	ENSFDAG00000021027	PUM3	99	88.545	Fukomys_damarensis
MGP_PahariEiJ_G0014338	Pum3	89	58.115	ENSFHEG00000015576	pum3	99	58.115	Fundulus_heteroclitus
MGP_PahariEiJ_G0014338	Pum3	83	59.888	ENSGMOG00000014217	pum3	97	59.847	Gadus_morhua
MGP_PahariEiJ_G0014338	Pum3	99	69.219	ENSGALG00000010178	PUM3	100	69.832	Gallus_gallus
MGP_PahariEiJ_G0014338	Pum3	55	59.116	ENSGAFG00000001930	pum3	62	59.116	Gambusia_affinis
MGP_PahariEiJ_G0014338	Pum3	82	58.459	ENSGACG00000017878	pum3	96	58.444	Gasterosteus_aculeatus
MGP_PahariEiJ_G0014338	Pum3	99	72.136	ENSGAGG00000018983	PUM3	99	72.843	Gopherus_agassizii
MGP_PahariEiJ_G0014338	Pum3	99	90.417	ENSGGOG00000006143	PUM3	100	90.417	Gorilla_gorilla
MGP_PahariEiJ_G0014338	Pum3	99	49.155	ENSHBUG00000012903	pum3	80	54.960	Haplochromis_burtoni
MGP_PahariEiJ_G0014338	Pum3	99	88.408	ENSHGLG00000015868	-	99	88.545	Heterocephalus_glaber_female
MGP_PahariEiJ_G0014338	Pum3	99	88.545	ENSHGLG00100018825	PUM3	99	88.682	Heterocephalus_glaber_male
MGP_PahariEiJ_G0014338	Pum3	92	57.561	ENSHCOG00000010306	pum3	99	54.519	Hippocampus_comes
MGP_PahariEiJ_G0014338	Pum3	87	66.726	ENSIPUG00000024801	pum3	99	63.333	Ictalurus_punctatus
MGP_PahariEiJ_G0014338	Pum3	100	91.358	ENSSTOG00000009586	PUM3	100	91.358	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0014338	Pum3	99	88.563	ENSJJAG00000012563	Pum3	99	88.563	Jaculus_jaculus
MGP_PahariEiJ_G0014338	Pum3	95	54.823	ENSKMAG00000010277	pum3	98	54.618	Kryptolebias_marmoratus
MGP_PahariEiJ_G0014338	Pum3	99	53.800	ENSLBEG00000012213	pum3	99	53.812	Labrus_bergylta
MGP_PahariEiJ_G0014338	Pum3	99	66.514	ENSLACG00000008312	PUM3	99	66.514	Latimeria_chalumnae
MGP_PahariEiJ_G0014338	Pum3	96	66.083	ENSLOCG00000012529	pum3	99	66.083	Lepisosteus_oculatus
MGP_PahariEiJ_G0014338	Pum3	99	87.616	ENSLAFG00000017341	PUM3	99	87.616	Loxodonta_africana
MGP_PahariEiJ_G0014338	Pum3	99	90.572	ENSMFAG00000001430	PUM3	100	90.572	Macaca_fascicularis
MGP_PahariEiJ_G0014338	Pum3	99	90.572	ENSMMUG00000002362	PUM3	99	90.572	Macaca_mulatta
MGP_PahariEiJ_G0014338	Pum3	99	90.572	ENSMNEG00000035288	PUM3	100	90.572	Macaca_nemestrina
MGP_PahariEiJ_G0014338	Pum3	99	90.881	ENSMLEG00000034820	PUM3	100	90.881	Mandrillus_leucophaeus
MGP_PahariEiJ_G0014338	Pum3	85	58.554	ENSMAMG00000022861	pum3	95	55.929	Mastacembelus_armatus
MGP_PahariEiJ_G0014338	Pum3	96	55.332	ENSMZEG00005014205	pum3	95	53.191	Maylandia_zebra
MGP_PahariEiJ_G0014338	Pum3	99	63.706	ENSMGAG00000002255	PUM3	99	64.696	Meleagris_gallopavo
MGP_PahariEiJ_G0014338	Pum3	99	93.663	ENSMAUG00000009733	Pum3	99	93.663	Mesocricetus_auratus
MGP_PahariEiJ_G0014338	Pum3	99	89.335	ENSMICG00000045916	PUM3	87	89.335	Microcebus_murinus
MGP_PahariEiJ_G0014338	Pum3	99	90.093	ENSMOCG00000014830	-	99	89.628	Microtus_ochrogaster
MGP_PahariEiJ_G0014338	Pum3	99	94.281	ENSMOCG00000019519	-	99	94.281	Microtus_ochrogaster
MGP_PahariEiJ_G0014338	Pum3	92	52.350	ENSMMOG00000012184	pum3	99	50.700	Mola_mola
MGP_PahariEiJ_G0014338	Pum3	99	69.402	ENSMODG00000015417	PUM3	99	68.194	Monodelphis_domestica
MGP_PahariEiJ_G0014338	Pum3	82	59.626	ENSMALG00000022164	pum3	93	54.732	Monopterus_albus
MGP_PahariEiJ_G0014338	Pum3	99	97.836	MGP_CAROLIEiJ_G0022845	Pum3	99	97.836	Mus_caroli
MGP_PahariEiJ_G0014338	Pum3	99	97.991	ENSMUSG00000041360	Pum3	99	97.991	Mus_musculus
MGP_PahariEiJ_G0014338	Pum3	99	97.836	MGP_SPRETEiJ_G0023763	Pum3	99	97.836	Mus_spretus
MGP_PahariEiJ_G0014338	Pum3	99	87.152	ENSMPUG00000005125	PUM3	99	87.152	Mustela_putorius_furo
MGP_PahariEiJ_G0014338	Pum3	99	87.635	ENSMLUG00000002309	PUM3	100	87.635	Myotis_lucifugus
MGP_PahariEiJ_G0014338	Pum3	99	87.191	ENSNGAG00000019468	Pum3	99	87.191	Nannospalax_galili
MGP_PahariEiJ_G0014338	Pum3	93	53.289	ENSNBRG00000021370	pum3	79	58.333	Neolamprologus_brichardi
MGP_PahariEiJ_G0014338	Pum3	99	90.572	ENSNLEG00000008712	PUM3	100	90.572	Nomascus_leucogenys
MGP_PahariEiJ_G0014338	Pum3	75	59.548	ENSMEUG00000013606	-	96	58.058	Notamacropus_eugenii
MGP_PahariEiJ_G0014338	Pum3	79	76.972	ENSOPRG00000004225	-	79	76.972	Ochotona_princeps
MGP_PahariEiJ_G0014338	Pum3	99	87.944	ENSODEG00000003625	-	99	87.944	Octodon_degus
MGP_PahariEiJ_G0014338	Pum3	99	82.743	ENSODEG00000016477	-	99	82.743	Octodon_degus
MGP_PahariEiJ_G0014338	Pum3	99	54.062	ENSONIG00000012733	pum3	95	54.062	Oreochromis_niloticus
MGP_PahariEiJ_G0014338	Pum3	81	79.167	ENSOANG00000014995	PUM3	96	79.167	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0014338	Pum3	99	88.854	ENSOCUG00000004189	-	99	88.854	Oryctolagus_cuniculus
MGP_PahariEiJ_G0014338	Pum3	99	87.869	ENSOCUG00000026104	-	99	87.869	Oryctolagus_cuniculus
MGP_PahariEiJ_G0014338	Pum3	94	53.443	ENSORLG00000014935	pum3	99	52.484	Oryzias_latipes
MGP_PahariEiJ_G0014338	Pum3	94	53.443	ENSORLG00020002841	pum3	99	52.255	Oryzias_latipes_hni
MGP_PahariEiJ_G0014338	Pum3	96	53.251	ENSORLG00015015906	pum3	99	52.322	Oryzias_latipes_hsok
MGP_PahariEiJ_G0014338	Pum3	93	54.036	ENSOMEG00000009427	pum3	99	52.804	Oryzias_melastigma
MGP_PahariEiJ_G0014338	Pum3	99	87.172	ENSOGAG00000008125	-	99	87.172	Otolemur_garnettii
MGP_PahariEiJ_G0014338	Pum3	99	65.596	ENSOGAG00000033481	-	99	64.679	Otolemur_garnettii
MGP_PahariEiJ_G0014338	Pum3	99	88.117	ENSOARG00000013337	PUM3	99	88.117	Ovis_aries
MGP_PahariEiJ_G0014338	Pum3	99	90.278	ENSPPAG00000041337	PUM3	100	90.278	Pan_paniscus
MGP_PahariEiJ_G0014338	Pum3	99	87.152	ENSPPRG00000000809	PUM3	99	87.152	Panthera_pardus
MGP_PahariEiJ_G0014338	Pum3	99	87.616	ENSPTIG00000021934	PUM3	99	87.616	Panthera_tigris_altaica
MGP_PahariEiJ_G0014338	Pum3	99	90.432	ENSPTRG00000020735	PUM3	100	90.432	Pan_troglodytes
MGP_PahariEiJ_G0014338	Pum3	99	90.726	ENSPANG00000025118	PUM3	100	90.726	Papio_anubis
MGP_PahariEiJ_G0014338	Pum3	99	62.367	ENSPKIG00000022249	pum3	99	63.967	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0014338	Pum3	99	71.827	ENSPSIG00000016272	PUM3	99	71.827	Pelodiscus_sinensis
MGP_PahariEiJ_G0014338	Pum3	76	61.914	ENSPMGG00000021261	pum3	98	61.914	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0014338	Pum3	99	78.980	ENSPEMG00000019340	-	99	89.524	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0014338	Pum3	99	76.119	ENSPCIG00000030598	PUM3	92	76.119	Phascolarctos_cinereus
MGP_PahariEiJ_G0014338	Pum3	91	55.075	ENSPFOG00000001719	pum3	94	55.518	Poecilia_formosa
MGP_PahariEiJ_G0014338	Pum3	99	52.446	ENSPLAG00000020010	pum3	99	52.752	Poecilia_latipinna
MGP_PahariEiJ_G0014338	Pum3	99	52.599	ENSPMEG00000017451	pum3	99	52.905	Poecilia_mexicana
MGP_PahariEiJ_G0014338	Pum3	51	46.296	ENSPREG00000019478	-	69	64.211	Poecilia_reticulata
MGP_PahariEiJ_G0014338	Pum3	99	90.572	ENSPPYG00000019255	PUM3	100	90.572	Pongo_abelii
MGP_PahariEiJ_G0014338	Pum3	100	75.463	ENSPCAG00000005797	PUM3	95	75.580	Procavia_capensis
MGP_PahariEiJ_G0014338	Pum3	99	89.319	ENSPCOG00000027325	PUM3	99	89.319	Propithecus_coquereli
MGP_PahariEiJ_G0014338	Pum3	99	86.090	ENSPVAG00000016135	PUM3	95	86.090	Pteropus_vampyrus
MGP_PahariEiJ_G0014338	Pum3	96	55.590	ENSPNYG00000016124	pum3	96	54.688	Pundamilia_nyererei
MGP_PahariEiJ_G0014338	Pum3	89	65.577	ENSPNAG00000026524	pum3	92	65.577	Pygocentrus_nattereri
MGP_PahariEiJ_G0014338	Pum3	99	93.653	ENSRNOG00000012574	Pum3	99	93.653	Rattus_norvegicus
MGP_PahariEiJ_G0014338	Pum3	99	93.344	ENSRNOG00000048356	RGD1308750	99	93.344	Rattus_norvegicus
MGP_PahariEiJ_G0014338	Pum3	99	90.726	ENSRBIG00000036924	PUM3	100	90.572	Rhinopithecus_bieti
MGP_PahariEiJ_G0014338	Pum3	99	90.726	ENSRROG00000041089	PUM3	100	90.726	Rhinopithecus_roxellana
MGP_PahariEiJ_G0014338	Pum3	99	90.881	ENSSBOG00000028066	PUM3	100	90.881	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0014338	Pum3	99	77.743	ENSSHAG00000003730	PUM3	99	77.743	Sarcophilus_harrisii
MGP_PahariEiJ_G0014338	Pum3	94	63.492	ENSSFOG00015018778	pum3	98	63.492	Scleropages_formosus
MGP_PahariEiJ_G0014338	Pum3	86	58.855	ENSSMAG00000013236	pum3	99	53.985	Scophthalmus_maximus
MGP_PahariEiJ_G0014338	Pum3	95	56.704	ENSSDUG00000001887	pum3	94	55.416	Seriola_dumerili
MGP_PahariEiJ_G0014338	Pum3	99	53.869	ENSSLDG00000015766	pum3	99	53.812	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0014338	Pum3	95	84.142	ENSSARG00000000579	PUM3	99	84.142	Sorex_araneus
MGP_PahariEiJ_G0014338	Pum3	99	69.243	ENSSPUG00000001707	PUM3	100	68.056	Sphenodon_punctatus
MGP_PahariEiJ_G0014338	Pum3	99	52.018	ENSSPAG00000003976	pum3	97	52.941	Stegastes_partitus
MGP_PahariEiJ_G0014338	Pum3	99	88.717	ENSSSCG00000005227	PUM3	99	89.377	Sus_scrofa
MGP_PahariEiJ_G0014338	Pum3	99	71.672	ENSTGUG00000005339	PUM3	99	71.672	Taeniopygia_guttata
MGP_PahariEiJ_G0014338	Pum3	96	55.758	ENSTRUG00000004074	pum3	79	61.641	Takifugu_rubripes
MGP_PahariEiJ_G0014338	Pum3	90	58.076	ENSTNIG00000010325	pum3	98	57.073	Tetraodon_nigroviridis
MGP_PahariEiJ_G0014338	Pum3	86	69.964	ENSTBEG00000013058	PUM3	86	69.964	Tupaia_belangeri
MGP_PahariEiJ_G0014338	Pum3	99	80.680	ENSTTRG00000001062	PUM3	96	80.680	Tursiops_truncatus
MGP_PahariEiJ_G0014338	Pum3	99	80.680	ENSUMAG00000018443	PUM3	99	83.840	Ursus_maritimus
MGP_PahariEiJ_G0014338	Pum3	99	88.117	ENSVPAG00000010766	PUM3	99	88.117	Vicugna_pacos
MGP_PahariEiJ_G0014338	Pum3	99	88.872	ENSVVUG00000006527	PUM3	99	88.872	Vulpes_vulpes
MGP_PahariEiJ_G0014338	Pum3	96	60.476	ENSXETG00000011707	pum3	96	60.476	Xenopus_tropicalis
MGP_PahariEiJ_G0014338	Pum3	91	53.821	ENSXCOG00000006725	pum3	87	56.679	Xiphophorus_couchianus
MGP_PahariEiJ_G0014338	Pum3	91	55.960	ENSXMAG00000002926	pum3	93	52.809	Xiphophorus_maculatus