EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0014346 (Gene tree)
Gene ID: 110327181
Gene Symbol: Rcl1
Alias: 2310040A02Rik|RPCL1|Rnac
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 40944 bases
Position: chr1:140662544-140703487
Accession: 110327181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0021465	RTC	PF01137.21	2.3e-61	1	1
MGP_PahariEiJ_P0021465	RTC_insert	PF05189.13	1.8e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0021466	-	1188	-	MGP_PahariEiJ_P0021466	170 (aa)	-	-
MGP_PahariEiJ_T0021465	-	1773	-	MGP_PahariEiJ_P0021465	373 (aa)	XP_021061604	UPI000A304DD8

Gene Model

Click here to download MGP_PahariEiJ_G0014346's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0014346's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0014346	Rcl1	100	97.059	ENSG00000120158	RCL1	100	96.744	Homo_sapiens
MGP_PahariEiJ_G0014346	Rcl1	100	81.287	ENSAPOG00000015666	rcl1	100	79.412	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0014346	Rcl1	100	98.235	ENSAMEG00000002631	RCL1	100	96.783	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0014346	Rcl1	100	81.871	ENSACIG00000021195	rcl1	99	80.000	Amphilophus_citrinellus
MGP_PahariEiJ_G0014346	Rcl1	100	80.117	ENSAOCG00000002223	rcl1	100	78.610	Amphiprion_ocellaris
MGP_PahariEiJ_G0014346	Rcl1	100	80.117	ENSAPEG00000006905	rcl1	100	78.877	Amphiprion_percula
MGP_PahariEiJ_G0014346	Rcl1	100	76.608	ENSATEG00000020026	rcl1	99	76.757	Anabas_testudineus
MGP_PahariEiJ_G0014346	Rcl1	100	87.059	ENSAPLG00000006031	RCL1	100	87.500	Anas_platyrhynchos
MGP_PahariEiJ_G0014346	Rcl1	100	89.412	ENSACAG00000003640	RCL1	100	85.523	Anolis_carolinensis
MGP_PahariEiJ_G0014346	Rcl1	100	97.059	ENSANAG00000037372	RCL1	100	95.710	Aotus_nancymaae
MGP_PahariEiJ_G0014346	Rcl1	100	81.871	ENSACLG00000021724	rcl1	99	78.919	Astatotilapia_calliptera
MGP_PahariEiJ_G0014346	Rcl1	100	80.702	ENSAMXG00000033394	rcl1	99	79.076	Astyanax_mexicanus
MGP_PahariEiJ_G0014346	Rcl1	99	47.074	WBGene00022852	ZK1127.5	99	47.074	Caenorhabditis_elegans
MGP_PahariEiJ_G0014346	Rcl1	100	96.471	ENSCJAG00000011202	RCL1	100	96.247	Callithrix_jacchus
MGP_PahariEiJ_G0014346	Rcl1	100	97.059	ENSCAFG00000002091	RCL1	100	95.979	Canis_familiaris
MGP_PahariEiJ_G0014346	Rcl1	100	97.059	ENSCAFG00020000638	RCL1	78	95.979	Canis_lupus_dingo
MGP_PahariEiJ_G0014346	Rcl1	100	95.294	ENSCHIG00000012407	RCL1	100	94.370	Capra_hircus
MGP_PahariEiJ_G0014346	Rcl1	100	97.059	ENSTSYG00000009592	RCL1	97	96.133	Carlito_syrichta
MGP_PahariEiJ_G0014346	Rcl1	68	79.769	ENSCAPG00000013575	RCL1	100	79.769	Cavia_aperea
MGP_PahariEiJ_G0014346	Rcl1	100	95.882	ENSCPOG00000015354	RCL1	100	95.442	Cavia_porcellus
MGP_PahariEiJ_G0014346	Rcl1	100	96.471	ENSCCAG00000033505	RCL1	100	96.247	Cebus_capucinus
MGP_PahariEiJ_G0014346	Rcl1	100	97.059	ENSCATG00000034721	RCL1	100	95.710	Cercocebus_atys
MGP_PahariEiJ_G0014346	Rcl1	100	95.294	ENSCLAG00000007445	RCL1	100	95.174	Chinchilla_lanigera
MGP_PahariEiJ_G0014346	Rcl1	100	97.059	ENSCSAG00000008811	RCL1	100	96.247	Chlorocebus_sabaeus
MGP_PahariEiJ_G0014346	Rcl1	87	80.495	ENSCHOG00000007216	RCL1	100	80.495	Choloepus_hoffmanni
MGP_PahariEiJ_G0014346	Rcl1	100	91.765	ENSCPBG00000025481	RCL1	94	89.970	Chrysemys_picta_bellii
MGP_PahariEiJ_G0014346	Rcl1	100	58.621	ENSCING00000019565	-	98	58.919	Ciona_intestinalis
MGP_PahariEiJ_G0014346	Rcl1	95	30.110	ENSCSAVG00000007269	-	95	30.028	Ciona_savignyi
MGP_PahariEiJ_G0014346	Rcl1	100	97.059	ENSCANG00000027099	RCL1	100	96.247	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0014346	Rcl1	100	98.660	ENSCGRG00001013748	Rcl1	100	98.660	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0014346	Rcl1	100	97.647	ENSCGRG00000005843	Rcl1	99	98.476	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0014346	Rcl1	100	80.702	ENSCSEG00000000712	rcl1	97	79.459	Cynoglossus_semilaevis
MGP_PahariEiJ_G0014346	Rcl1	100	81.871	ENSCVAG00000011536	rcl1	99	80.811	Cyprinodon_variegatus
MGP_PahariEiJ_G0014346	Rcl1	100	80.702	ENSDARG00000038312	rcl1	100	76.567	Danio_rerio
MGP_PahariEiJ_G0014346	Rcl1	100	95.882	ENSDNOG00000019911	RCL1	100	94.717	Dasypus_novemcinctus
MGP_PahariEiJ_G0014346	Rcl1	100	96.471	ENSDORG00000015645	Rcl1	100	95.710	Dipodomys_ordii
MGP_PahariEiJ_G0014346	Rcl1	99	52.646	FBgn0020909	Rtc1	98	52.646	Drosophila_melanogaster
MGP_PahariEiJ_G0014346	Rcl1	100	70.000	ENSETEG00000014087	-	82	95.652	Echinops_telfairi
MGP_PahariEiJ_G0014346	Rcl1	100	54.667	ENSEBUG00000016621	-	100	54.667	Eptatretus_burgeri
MGP_PahariEiJ_G0014346	Rcl1	100	95.882	ENSEASG00005010653	RCL1	100	95.710	Equus_asinus_asinus
MGP_PahariEiJ_G0014346	Rcl1	100	95.882	ENSECAG00000015973	RCL1	100	95.710	Equus_caballus
MGP_PahariEiJ_G0014346	Rcl1	100	81.501	ENSEEUG00000009801	RCL1	100	81.501	Erinaceus_europaeus
MGP_PahariEiJ_G0014346	Rcl1	100	77.778	ENSELUG00000007353	rcl1	100	77.005	Esox_lucius
MGP_PahariEiJ_G0014346	Rcl1	100	95.882	ENSFCAG00000014557	RCL1	100	95.710	Felis_catus
MGP_PahariEiJ_G0014346	Rcl1	100	85.882	ENSFALG00000010553	RCL1	94	82.817	Ficedula_albicollis
MGP_PahariEiJ_G0014346	Rcl1	100	95.882	ENSFDAG00000004209	RCL1	100	94.801	Fukomys_damarensis
MGP_PahariEiJ_G0014346	Rcl1	100	83.041	ENSFHEG00000011228	rcl1	99	80.811	Fundulus_heteroclitus
MGP_PahariEiJ_G0014346	Rcl1	100	79.532	ENSGMOG00000004677	rcl1	99	77.838	Gadus_morhua
MGP_PahariEiJ_G0014346	Rcl1	100	85.882	ENSGALG00000015024	RCL1	99	86.179	Gallus_gallus
MGP_PahariEiJ_G0014346	Rcl1	100	78.947	ENSGAFG00000007257	rcl1	99	78.649	Gambusia_affinis
MGP_PahariEiJ_G0014346	Rcl1	100	78.363	ENSGACG00000017474	rcl1	100	78.075	Gasterosteus_aculeatus
MGP_PahariEiJ_G0014346	Rcl1	100	91.765	ENSGAGG00000003689	RCL1	100	89.544	Gopherus_agassizii
MGP_PahariEiJ_G0014346	Rcl1	100	97.647	ENSGGOG00000015041	RCL1	100	96.515	Gorilla_gorilla
MGP_PahariEiJ_G0014346	Rcl1	100	82.456	ENSHBUG00000001393	rcl1	99	79.189	Haplochromis_burtoni
MGP_PahariEiJ_G0014346	Rcl1	100	95.174	ENSHGLG00000016452	RCL1	100	95.174	Heterocephalus_glaber_female
MGP_PahariEiJ_G0014346	Rcl1	100	85.882	ENSHGLG00000005368	-	100	79.088	Heterocephalus_glaber_female
MGP_PahariEiJ_G0014346	Rcl1	100	94.706	ENSHGLG00100008718	-	100	88.472	Heterocephalus_glaber_male
MGP_PahariEiJ_G0014346	Rcl1	100	85.882	ENSHGLG00100018010	-	100	79.625	Heterocephalus_glaber_male
MGP_PahariEiJ_G0014346	Rcl1	100	79.532	ENSHCOG00000020170	rcl1	99	78.649	Hippocampus_comes
MGP_PahariEiJ_G0014346	Rcl1	100	80.117	ENSIPUG00000018054	RCL1	99	80.163	Ictalurus_punctatus
MGP_PahariEiJ_G0014346	Rcl1	100	96.471	ENSSTOG00000000023	RCL1	100	95.174	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0014346	Rcl1	92	71.795	ENSJJAG00000000764	-	95	72.680	Jaculus_jaculus
MGP_PahariEiJ_G0014346	Rcl1	100	95.710	ENSJJAG00000022803	-	100	95.710	Jaculus_jaculus
MGP_PahariEiJ_G0014346	Rcl1	100	84.987	ENSJJAG00000015632	-	100	84.987	Jaculus_jaculus
MGP_PahariEiJ_G0014346	Rcl1	100	78.947	ENSKMAG00000011946	rcl1	99	79.019	Kryptolebias_marmoratus
MGP_PahariEiJ_G0014346	Rcl1	100	83.041	ENSLBEG00000003957	rcl1	99	76.486	Labrus_bergylta
MGP_PahariEiJ_G0014346	Rcl1	91	81.121	ENSLACG00000004594	RCL1	98	85.174	Latimeria_chalumnae
MGP_PahariEiJ_G0014346	Rcl1	100	85.882	ENSLOCG00000010148	rcl1	98	82.842	Lepisosteus_oculatus
MGP_PahariEiJ_G0014346	Rcl1	100	92.941	ENSLAFG00000017495	RCL1	100	91.689	Loxodonta_africana
MGP_PahariEiJ_G0014346	Rcl1	100	97.059	ENSMFAG00000037906	RCL1	100	96.247	Macaca_fascicularis
MGP_PahariEiJ_G0014346	Rcl1	100	97.059	ENSMNEG00000012288	RCL1	100	96.247	Macaca_nemestrina
MGP_PahariEiJ_G0014346	Rcl1	100	97.059	ENSMLEG00000043088	RCL1	100	96.247	Mandrillus_leucophaeus
MGP_PahariEiJ_G0014346	Rcl1	100	81.871	ENSMAMG00000008311	rcl1	99	80.000	Mastacembelus_armatus
MGP_PahariEiJ_G0014346	Rcl1	100	81.871	ENSMZEG00005017292	rcl1	99	78.919	Maylandia_zebra
MGP_PahariEiJ_G0014346	Rcl1	100	86.550	ENSMGAG00000002245	RCL1	97	84.434	Meleagris_gallopavo
MGP_PahariEiJ_G0014346	Rcl1	100	98.235	ENSMAUG00000008922	Rcl1	100	98.605	Mesocricetus_auratus
MGP_PahariEiJ_G0014346	Rcl1	100	95.294	ENSMICG00000015562	RCL1	100	94.638	Microcebus_murinus
MGP_PahariEiJ_G0014346	Rcl1	100	99.412	ENSMOCG00000012145	Rcl1	100	98.928	Microtus_ochrogaster
MGP_PahariEiJ_G0014346	Rcl1	100	75.439	ENSMMOG00000021264	rcl1	99	76.280	Mola_mola
MGP_PahariEiJ_G0014346	Rcl1	95	92.676	ENSMODG00000015377	RCL1	94	92.676	Monodelphis_domestica
MGP_PahariEiJ_G0014346	Rcl1	100	80.117	ENSMALG00000018618	rcl1	99	78.649	Monopterus_albus
MGP_PahariEiJ_G0014346	Rcl1	100	98.928	MGP_CAROLIEiJ_G0022853	Rcl1	100	98.928	Mus_caroli
MGP_PahariEiJ_G0014346	Rcl1	100	99.412	ENSMUSG00000024785	Rcl1	100	98.928	Mus_musculus
MGP_PahariEiJ_G0014346	Rcl1	100	99.412	MGP_SPRETEiJ_G0023771	Rcl1	100	99.412	Mus_spretus
MGP_PahariEiJ_G0014346	Rcl1	100	97.647	ENSMPUG00000004998	RCL1	100	95.710	Mustela_putorius_furo
MGP_PahariEiJ_G0014346	Rcl1	100	97.059	ENSMLUG00000009654	RCL1	100	94.906	Myotis_lucifugus
MGP_PahariEiJ_G0014346	Rcl1	100	97.319	ENSNGAG00000015327	Rcl1	100	97.319	Nannospalax_galili
MGP_PahariEiJ_G0014346	Rcl1	100	81.871	ENSNBRG00000019854	rcl1	96	74.860	Neolamprologus_brichardi
MGP_PahariEiJ_G0014346	Rcl1	100	93.298	ENSNLEG00000008891	RCL1	100	93.298	Nomascus_leucogenys
MGP_PahariEiJ_G0014346	Rcl1	100	94.706	ENSMEUG00000007653	RCL1	100	86.327	Notamacropus_eugenii
MGP_PahariEiJ_G0014346	Rcl1	100	95.979	ENSOPRG00000010965	RCL1	100	95.979	Ochotona_princeps
MGP_PahariEiJ_G0014346	Rcl1	100	95.294	ENSODEG00000004151	RCL1	96	79.573	Octodon_degus
MGP_PahariEiJ_G0014346	Rcl1	100	81.871	ENSONIG00000003871	rcl1	99	79.459	Oreochromis_niloticus
MGP_PahariEiJ_G0014346	Rcl1	100	89.412	ENSOANG00000013193	-	100	87.352	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0014346	Rcl1	100	97.059	ENSOCUG00000008161	RCL1	100	96.515	Oryctolagus_cuniculus
MGP_PahariEiJ_G0014346	Rcl1	100	79.532	ENSORLG00000010443	rcl1	100	77.273	Oryzias_latipes
MGP_PahariEiJ_G0014346	Rcl1	100	79.532	ENSORLG00020012211	rcl1	100	77.273	Oryzias_latipes_hni
MGP_PahariEiJ_G0014346	Rcl1	100	79.532	ENSORLG00015001122	rcl1	100	77.005	Oryzias_latipes_hsok
MGP_PahariEiJ_G0014346	Rcl1	100	81.287	ENSOMEG00000022976	rcl1	88	78.877	Oryzias_melastigma
MGP_PahariEiJ_G0014346	Rcl1	100	95.882	ENSOGAG00000007480	RCL1	100	94.638	Otolemur_garnettii
MGP_PahariEiJ_G0014346	Rcl1	100	95.882	ENSOARG00000013463	RCL1	100	94.638	Ovis_aries
MGP_PahariEiJ_G0014346	Rcl1	100	97.059	ENSPPAG00000037958	RCL1	100	96.247	Pan_paniscus
MGP_PahariEiJ_G0014346	Rcl1	100	95.294	ENSPPRG00000022645	RCL1	100	94.906	Panthera_pardus
MGP_PahariEiJ_G0014346	Rcl1	100	95.882	ENSPTIG00000019031	RCL1	97	95.673	Panthera_tigris_altaica
MGP_PahariEiJ_G0014346	Rcl1	100	97.059	ENSPTRG00000020743	RCL1	100	95.979	Pan_troglodytes
MGP_PahariEiJ_G0014346	Rcl1	100	97.059	ENSPANG00000025151	RCL1	100	96.247	Papio_anubis
MGP_PahariEiJ_G0014346	Rcl1	100	81.871	ENSPKIG00000021022	rcl1	100	78.342	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0014346	Rcl1	100	91.765	ENSPSIG00000012302	RCL1	100	90.244	Pelodiscus_sinensis
MGP_PahariEiJ_G0014346	Rcl1	100	77.778	ENSPMGG00000024007	rcl1	100	76.738	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0014346	Rcl1	100	99.412	ENSPEMG00000023275	Rcl1	100	99.196	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0014346	Rcl1	97	30.411	ENSPMAG00000009110	rtca	96	30.411	Petromyzon_marinus
MGP_PahariEiJ_G0014346	Rcl1	99	69.412	ENSPMAG00000005419	-	95	68.715	Petromyzon_marinus
MGP_PahariEiJ_G0014346	Rcl1	100	95.294	ENSPCIG00000000188	RCL1	100	93.029	Phascolarctos_cinereus
MGP_PahariEiJ_G0014346	Rcl1	100	80.117	ENSPFOG00000019682	rcl1	99	79.459	Poecilia_formosa
MGP_PahariEiJ_G0014346	Rcl1	100	80.117	ENSPLAG00000022354	rcl1	99	79.459	Poecilia_latipinna
MGP_PahariEiJ_G0014346	Rcl1	100	80.117	ENSPMEG00000008131	rcl1	99	79.459	Poecilia_mexicana
MGP_PahariEiJ_G0014346	Rcl1	100	79.532	ENSPREG00000008032	rcl1	99	79.189	Poecilia_reticulata
MGP_PahariEiJ_G0014346	Rcl1	100	96.471	ENSPPYG00000019244	RCL1	100	96.247	Pongo_abelii
MGP_PahariEiJ_G0014346	Rcl1	100	84.450	ENSPCAG00000001440	RCL1	100	84.450	Procavia_capensis
MGP_PahariEiJ_G0014346	Rcl1	100	97.059	ENSPCOG00000009611	RCL1	100	95.979	Propithecus_coquereli
MGP_PahariEiJ_G0014346	Rcl1	100	97.647	ENSPVAG00000015752	RCL1	100	95.710	Pteropus_vampyrus
MGP_PahariEiJ_G0014346	Rcl1	100	81.871	ENSPNYG00000012910	rcl1	99	78.919	Pundamilia_nyererei
MGP_PahariEiJ_G0014346	Rcl1	100	83.041	ENSPNAG00000028307	rcl1	92	79.893	Pygocentrus_nattereri
MGP_PahariEiJ_G0014346	Rcl1	100	98.123	ENSRNOG00000015491	Rcl1	100	98.123	Rattus_norvegicus
MGP_PahariEiJ_G0014346	Rcl1	100	96.471	ENSRBIG00000035818	RCL1	100	95.979	Rhinopithecus_bieti
MGP_PahariEiJ_G0014346	Rcl1	100	97.059	ENSRROG00000029781	RCL1	100	96.247	Rhinopithecus_roxellana
MGP_PahariEiJ_G0014346	Rcl1	98	35.946	YOL010W	-	97	35.904	Saccharomyces_cerevisiae
MGP_PahariEiJ_G0014346	Rcl1	100	97.059	ENSSBOG00000026369	RCL1	100	95.979	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0014346	Rcl1	100	94.118	ENSSHAG00000014086	RCL1	100	91.818	Sarcophilus_harrisii
MGP_PahariEiJ_G0014346	Rcl1	100	80.702	ENSSFOG00015023020	rcl1	100	78.610	Scleropages_formosus
MGP_PahariEiJ_G0014346	Rcl1	100	78.947	ENSSMAG00000019751	rcl1	85	79.459	Scophthalmus_maximus
MGP_PahariEiJ_G0014346	Rcl1	100	79.532	ENSSDUG00000006349	rcl1	100	78.342	Seriola_dumerili
MGP_PahariEiJ_G0014346	Rcl1	100	80.702	ENSSLDG00000022076	rcl1	100	78.610	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0014346	Rcl1	100	96.471	ENSSARG00000009260	RCL1	100	94.906	Sorex_araneus
MGP_PahariEiJ_G0014346	Rcl1	100	91.176	ENSSPUG00000016330	RCL1	100	88.472	Sphenodon_punctatus
MGP_PahariEiJ_G0014346	Rcl1	100	81.871	ENSSPAG00000018038	rcl1	100	80.481	Stegastes_partitus
MGP_PahariEiJ_G0014346	Rcl1	100	97.647	ENSSSCG00000005217	RCL1	83	96.247	Sus_scrofa
MGP_PahariEiJ_G0014346	Rcl1	100	85.067	ENSTGUG00000005138	RCL1	100	85.067	Taeniopygia_guttata
MGP_PahariEiJ_G0014346	Rcl1	100	79.532	ENSTRUG00000010493	rcl1	99	78.919	Takifugu_rubripes
MGP_PahariEiJ_G0014346	Rcl1	100	79.532	ENSTNIG00000013214	rcl1	99	78.320	Tetraodon_nigroviridis
MGP_PahariEiJ_G0014346	Rcl1	100	95.882	ENSTBEG00000016339	RCL1	100	88.740	Tupaia_belangeri
MGP_PahariEiJ_G0014346	Rcl1	100	95.294	ENSTTRG00000016525	RCL1	100	95.174	Tursiops_truncatus
MGP_PahariEiJ_G0014346	Rcl1	100	98.235	ENSUAMG00000005598	RCL1	100	96.783	Ursus_americanus
MGP_PahariEiJ_G0014346	Rcl1	100	97.059	ENSUMAG00000017890	RCL1	97	96.024	Ursus_maritimus
MGP_PahariEiJ_G0014346	Rcl1	100	98.235	ENSVPAG00000009188	RCL1	100	96.636	Vicugna_pacos
MGP_PahariEiJ_G0014346	Rcl1	100	97.059	ENSVVUG00000007304	RCL1	89	95.732	Vulpes_vulpes
MGP_PahariEiJ_G0014346	Rcl1	100	74.599	ENSXETG00000000592	rcl1	100	74.599	Xenopus_tropicalis
MGP_PahariEiJ_G0014346	Rcl1	59	30.909	ENSXCOG00000008002	rtca	63	30.909	Xiphophorus_couchianus
MGP_PahariEiJ_G0014346	Rcl1	100	80.117	ENSXCOG00000004922	rcl1	99	79.459	Xiphophorus_couchianus
MGP_PahariEiJ_G0014346	Rcl1	100	80.117	ENSXMAG00000022366	RCL1	99	79.459	Xiphophorus_maculatus