EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0014365 (Gene tree)
Gene ID: -
Gene Symbol: Cstf2t
Alias: 64kDa|tCstF-64
Full Name: cleavage stimulation factor subunit 2 tau variant
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 3997 bases
Position: chr1:142645443-142649439
Accession: 110313070
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0021526	RRM_1	PF00076.22	8.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0021526	-	3780	XM_021187103	MGP_PahariEiJ_P0021526	644 (aa)	XP_021042762	-

Gene Model

Click here to download MGP_PahariEiJ_G0014365's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0014365's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0014365	Cstf2t	99	63.198	MGP_PahariEiJ_G0031923	Cstf2	99	67.228

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0014365	Cstf2t	100	85.957	ENSG00000177613	CSTF2T	82	88.168	Homo_sapiens
MGP_PahariEiJ_G0014365	Cstf2t	100	85.208	ENSAMEG00000015766	CSTF2T	82	85.277	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0014365	Cstf2t	54	77.364	ENSANAG00000027508	-	89	77.874	Aotus_nancymaae
MGP_PahariEiJ_G0014365	Cstf2t	100	83.185	ENSBTAG00000018406	CSTF2T	78	87.954	Bos_taurus
MGP_PahariEiJ_G0014365	Cstf2t	54	77.233	ENSCJAG00000011554	-	97	77.522	Callithrix_jacchus
MGP_PahariEiJ_G0014365	Cstf2t	54	71.470	ENSCJAG00000039083	-	93	71.470	Callithrix_jacchus
MGP_PahariEiJ_G0014365	Cstf2t	84	90.698	ENSCAFG00000015567	CSTF2T	99	96.825	Canis_familiaris
MGP_PahariEiJ_G0014365	Cstf2t	81	79.655	ENSCAFG00020026426	CSTF2T	77	79.310	Canis_lupus_dingo
MGP_PahariEiJ_G0014365	Cstf2t	100	86.963	ENSCHIG00000016590	CSTF2T	79	86.616	Capra_hircus
MGP_PahariEiJ_G0014365	Cstf2t	100	84.699	ENSTSYG00000007750	CSTF2T	96	75.793	Carlito_syrichta
MGP_PahariEiJ_G0014365	Cstf2t	100	84.663	ENSCPOG00000004195	CSTF2T	85	87.902	Cavia_porcellus
MGP_PahariEiJ_G0014365	Cstf2t	54	77.937	ENSCCAG00000020816	-	88	77.299	Cebus_capucinus
MGP_PahariEiJ_G0014365	Cstf2t	54	78.674	ENSCATG00000041868	-	95	77.810	Cercocebus_atys
MGP_PahariEiJ_G0014365	Cstf2t	100	86.830	ENSCLAG00000017916	CSTF2T	83	87.736	Chinchilla_lanigera
MGP_PahariEiJ_G0014365	Cstf2t	100	86.728	ENSCSAG00000018437	CSTF2T	82	88.740	Chlorocebus_sabaeus
MGP_PahariEiJ_G0014365	Cstf2t	53	100.000	ENSCHOG00000011888	-	53	100.000	Choloepus_hoffmanni
MGP_PahariEiJ_G0014365	Cstf2t	53	77.778	ENSCANG00000005843	-	87	77.982	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0014365	Cstf2t	100	91.331	ENSCGRG00001003222	Cstf2t	80	92.898	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0014365	Cstf2t	100	92.391	ENSCGRG00000008682	Cstf2t	100	92.702	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0014365	Cstf2t	100	83.796	ENSDNOG00000003283	CSTF2T	82	86.069	Dasypus_novemcinctus
MGP_PahariEiJ_G0014365	Cstf2t	81	86.923	ENSDORG00000011245	Cstf2t	80	87.356	Dipodomys_ordii
MGP_PahariEiJ_G0014365	Cstf2t	100	87.326	ENSEASG00005012929	CSTF2T	81	88.337	Equus_asinus_asinus
MGP_PahariEiJ_G0014365	Cstf2t	100	88.272	ENSECAG00000004701	CSTF2T	80	88.337	Equus_caballus
MGP_PahariEiJ_G0014365	Cstf2t	83	89.394	ENSELUG00000004079	-	78	88.265	Esox_lucius
MGP_PahariEiJ_G0014365	Cstf2t	100	87.326	ENSFCAG00000046300	CSTF2T	82	88.719	Felis_catus
MGP_PahariEiJ_G0014365	Cstf2t	100	88.923	ENSFDAG00000021170	CSTF2T	100	87.538	Fukomys_damarensis
MGP_PahariEiJ_G0014365	Cstf2t	100	84.568	ENSGGOG00000042388	-	83	87.405	Gorilla_gorilla
MGP_PahariEiJ_G0014365	Cstf2t	100	84.568	ENSGGOG00000036416	-	83	87.405	Gorilla_gorilla
MGP_PahariEiJ_G0014365	Cstf2t	81	87.023	ENSHGLG00000015478	CSTF2T	81	87.262	Heterocephalus_glaber_female
MGP_PahariEiJ_G0014365	Cstf2t	81	87.023	ENSHGLG00100000336	CSTF2T	81	87.262	Heterocephalus_glaber_male
MGP_PahariEiJ_G0014365	Cstf2t	100	86.378	ENSSTOG00000026303	CSTF2T	83	87.954	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0014365	Cstf2t	100	77.898	ENSLAFG00000002058	CSTF2T	100	78.207	Loxodonta_africana
MGP_PahariEiJ_G0014365	Cstf2t	53	78.529	ENSMFAG00000042009	-	93	77.982	Macaca_fascicularis
MGP_PahariEiJ_G0014365	Cstf2t	54	78.161	ENSMMUG00000042906	-	99	77.299	Macaca_mulatta
MGP_PahariEiJ_G0014365	Cstf2t	53	78.529	ENSMNEG00000031410	-	93	77.982	Macaca_nemestrina
MGP_PahariEiJ_G0014365	Cstf2t	100	91.770	ENSMAUG00000006359	Cstf2t	83	94.061	Mesocricetus_auratus
MGP_PahariEiJ_G0014365	Cstf2t	100	85.054	ENSMICG00000000867	-	83	88.762	Microcebus_murinus
MGP_PahariEiJ_G0014365	Cstf2t	100	79.784	ENSMICG00000030551	-	100	81.193	Microcebus_murinus
MGP_PahariEiJ_G0014365	Cstf2t	100	88.527	ENSMOCG00000020428	Cstf2t	81	92.720	Microtus_ochrogaster
MGP_PahariEiJ_G0014365	Cstf2t	53	90.863	ENSMALG00000008842	-	53	90.909	Monopterus_albus
MGP_PahariEiJ_G0014365	Cstf2t	100	95.652	MGP_CAROLIEiJ_G0022872	Cstf2t	82	95.211	Mus_caroli
MGP_PahariEiJ_G0014365	Cstf2t	100	96.894	ENSMUSG00000053536	Cstf2t	100	96.894	Mus_musculus
MGP_PahariEiJ_G0014365	Cstf2t	100	97.050	MGP_SPRETEiJ_G0023790	Cstf2t	100	97.050	Mus_spretus
MGP_PahariEiJ_G0014365	Cstf2t	100	85.317	ENSMPUG00000020141	CSTF2T	83	88.145	Mustela_putorius_furo
MGP_PahariEiJ_G0014365	Cstf2t	100	76.888	ENSMLUG00000027140	-	84	79.886	Myotis_lucifugus
MGP_PahariEiJ_G0014365	Cstf2t	100	85.930	ENSMLUG00000011187	-	78	86.286	Myotis_lucifugus
MGP_PahariEiJ_G0014365	Cstf2t	100	88.717	ENSNGAG00000003304	Cstf2t	83	91.221	Nannospalax_galili
MGP_PahariEiJ_G0014365	Cstf2t	100	82.028	ENSNLEG00000012025	CSTF2T	83	83.871	Nomascus_leucogenys
MGP_PahariEiJ_G0014365	Cstf2t	100	81.260	ENSODEG00000012386	CSTF2T	100	81.106	Octodon_degus
MGP_PahariEiJ_G0014365	Cstf2t	100	82.857	ENSOCUG00000004647	-	100	95.161	Oryctolagus_cuniculus
MGP_PahariEiJ_G0014365	Cstf2t	100	85.935	ENSOGAG00000014565	CSTF2T	83	88.719	Otolemur_garnettii
MGP_PahariEiJ_G0014365	Cstf2t	100	86.371	ENSOARG00000019124	-	80	88.145	Ovis_aries
MGP_PahariEiJ_G0014365	Cstf2t	100	86.950	ENSOARG00000013688	-	78	88.145	Ovis_aries
MGP_PahariEiJ_G0014365	Cstf2t	53	75.731	ENSPPAG00000032242	-	91	76.147	Pan_paniscus
MGP_PahariEiJ_G0014365	Cstf2t	100	87.172	ENSPPRG00000018659	CSTF2T	82	88.719	Panthera_pardus
MGP_PahariEiJ_G0014365	Cstf2t	53	75.731	ENSPTRG00000043097	-	91	76.147	Pan_troglodytes
MGP_PahariEiJ_G0014365	Cstf2t	53	78.529	ENSPANG00000029734	-	93	77.982	Papio_anubis
MGP_PahariEiJ_G0014365	Cstf2t	99	50.519	ENSPFOG00000016756	CSTF2T	83	83.636	Poecilia_formosa
MGP_PahariEiJ_G0014365	Cstf2t	100	86.923	ENSPPYG00000002441	CSTF2T	81	88.359	Pongo_abelii
MGP_PahariEiJ_G0014365	Cstf2t	82	84.142	ENSPCAG00000000046	CSTF2T	82	86.502	Procavia_capensis
MGP_PahariEiJ_G0014365	Cstf2t	99	84.056	ENSPCOG00000010982	CSTF2T	83	88.337	Propithecus_coquereli
MGP_PahariEiJ_G0014365	Cstf2t	100	85.626	ENSPVAG00000006274	CSTF2T	83	88.337	Pteropus_vampyrus
MGP_PahariEiJ_G0014365	Cstf2t	100	95.497	ENSRNOG00000050289	Cstf2t	100	95.497	Rattus_norvegicus
MGP_PahariEiJ_G0014365	Cstf2t	100	84.877	ENSRBIG00000029324	CSTF2T	83	87.595	Rhinopithecus_bieti
MGP_PahariEiJ_G0014365	Cstf2t	100	85.031	ENSRROG00000042507	CSTF2T	83	87.786	Rhinopithecus_roxellana
MGP_PahariEiJ_G0014365	Cstf2t	100	85.626	ENSSBOG00000022638	CSTF2T	83	87.954	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0014365	Cstf2t	70	87.132	ENSSARG00000002013	-	62	98.086	Sorex_araneus
MGP_PahariEiJ_G0014365	Cstf2t	63	90.355	ENSSPAG00000009247	-	97	83.636	Stegastes_partitus
MGP_PahariEiJ_G0014365	Cstf2t	100	86.244	ENSSSCG00000010430	CSTF2T	82	89.484	Sus_scrofa
MGP_PahariEiJ_G0014365	Cstf2t	79	86.190	ENSTRUG00000004323	-	51	88.889	Takifugu_rubripes
MGP_PahariEiJ_G0014365	Cstf2t	100	71.561	ENSTBEG00000014379	CSTF2T	80	73.805	Tupaia_belangeri
MGP_PahariEiJ_G0014365	Cstf2t	100	87.172	ENSTTRG00000003341	CSTF2T	82	88.145	Tursiops_truncatus
MGP_PahariEiJ_G0014365	Cstf2t	100	86.039	ENSUMAG00000011141	CSTF2T	79	88.145	Ursus_maritimus
MGP_PahariEiJ_G0014365	Cstf2t	62	96.020	ENSVVUG00000002575	CSTF2T	97	100.000	Vulpes_vulpes