EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0014405 (Gene tree)
Gene ID: 110318251
Gene Symbol: Cpeb3
Alias: 4831444O18Rik
Full Name: cytoplasmic polyadenylation element binding protein 3
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 175957 bases
Position: chr1:148389118-148565074
Accession: 110318251
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0021619	RRM_1	PF00076.22	7.5e-12	1	1
MGP_PahariEiJ_P0021624	RRM_1	PF00076.22	2.9e-11	1	1
MGP_PahariEiJ_P0021622	RRM_1	PF00076.22	3e-11	1	1
MGP_PahariEiJ_P0021621	RRM_1	PF00076.22	3.1e-11	1	1
MGP_PahariEiJ_P0021618	RRM_1	PF00076.22	3.2e-11	1	1
MGP_PahariEiJ_P0021620	RRM_1	PF00076.22	3.2e-11	1	1
MGP_PahariEiJ_P0021623	RRM_1	PF00076.22	3.2e-11	1	1
MGP_PahariEiJ_P0021625	RRM_1	PF00076.22	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0021624	-	2422	XM_021193161	MGP_PahariEiJ_P0021624	688 (aa)	XP_021048812	UPI000A30BD03
MGP_PahariEiJ_T0021625	-	2101	XM_021193169	MGP_PahariEiJ_P0021625	564 (aa)	XP_021048828	UPI000A313986
MGP_PahariEiJ_T0021626	-	666	-	MGP_PahariEiJ_P0021626	182 (aa)	-	-
MGP_PahariEiJ_T0021627	-	566	-	MGP_PahariEiJ_P0021627	130 (aa)	-	-
MGP_PahariEiJ_T0021620	-	5735	-	MGP_PahariEiJ_P0021620	719 (aa)	XP_021048792	UPI000A310F7E
MGP_PahariEiJ_T0021621	-	5250	-	MGP_PahariEiJ_P0021621	702 (aa)	-	-
MGP_PahariEiJ_T0021622	-	4205	-	MGP_PahariEiJ_P0021622	696 (aa)	XP_021048802	UPI000A30761B
MGP_PahariEiJ_T0021623	-	3158	XM_021193125	MGP_PahariEiJ_P0021623	719 (aa)	XP_021048784	UPI000A310F7E
MGP_PahariEiJ_T0021628	-	675	-	MGP_PahariEiJ_P0021628	120 (aa)	-	-
MGP_PahariEiJ_T0021629	-	459	-	MGP_PahariEiJ_P0021629	98 (aa)	-	-
MGP_PahariEiJ_T0021619	-	4793	-	MGP_PahariEiJ_P0021619	415 (aa)	-	UPI00005A81FF
MGP_PahariEiJ_T0021618	-	5887	-	MGP_PahariEiJ_P0021618	719 (aa)	XP_021048792	UPI000A310F7E

Gene Model

Click here to download MGP_PahariEiJ_G0014405's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0014405's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0014405	Cpeb3	100	78.037	MGP_PahariEiJ_G0016973	Cpeb2	99	61.736
MGP_PahariEiJ_G0014405	Cpeb3	100	75.656	MGP_PahariEiJ_G0017307	Cpeb4	99	80.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0014405	Cpeb3	100	97.590	ENSG00000107864	CPEB3	100	96.738	Homo_sapiens
MGP_PahariEiJ_G0014405	Cpeb3	100	89.157	ENSAPOG00000003625	cpeb3	100	74.518	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0014405	Cpeb3	100	97.636	ENSAMEG00000014204	CPEB3	100	90.000	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0014405	Cpeb3	100	87.470	ENSACIG00000001933	cpeb3	100	74.171	Amphilophus_citrinellus
MGP_PahariEiJ_G0014405	Cpeb3	100	87.234	ENSAOCG00000015423	cpeb3	100	74.448	Amphiprion_ocellaris
MGP_PahariEiJ_G0014405	Cpeb3	100	85.060	ENSATEG00000010649	cpeb3	100	74.750	Anabas_testudineus
MGP_PahariEiJ_G0014405	Cpeb3	73	90.850	ENSAPLG00000014437	CPEB4	100	90.850	Anas_platyrhynchos
MGP_PahariEiJ_G0014405	Cpeb3	100	96.690	ENSACAG00000006335	CPEB3	100	85.596	Anolis_carolinensis
MGP_PahariEiJ_G0014405	Cpeb3	100	97.872	ENSANAG00000037406	CPEB3	100	97.091	Aotus_nancymaae
MGP_PahariEiJ_G0014405	Cpeb3	100	86.998	ENSACLG00000018590	cpeb3	89	73.865	Astatotilapia_calliptera
MGP_PahariEiJ_G0014405	Cpeb3	100	97.349	ENSBTAG00000015450	CPEB3	100	97.155	Bos_taurus
MGP_PahariEiJ_G0014405	Cpeb3	100	100.000	ENSCJAG00000008495	CPEB3	100	97.083	Callithrix_jacchus
MGP_PahariEiJ_G0014405	Cpeb3	100	97.097	ENSCAFG00000007423	CPEB3	100	97.097	Canis_familiaris
MGP_PahariEiJ_G0014405	Cpeb3	100	97.867	ENSCAFG00020001981	CPEB3	100	96.250	Canis_lupus_dingo
MGP_PahariEiJ_G0014405	Cpeb3	100	97.639	ENSCHIG00000017337	CPEB3	100	97.639	Capra_hircus
MGP_PahariEiJ_G0014405	Cpeb3	100	97.590	ENSTSYG00000003928	CPEB3	83	100.000	Carlito_syrichta
MGP_PahariEiJ_G0014405	Cpeb3	100	97.872	ENSCCAG00000033267	CPEB3	100	97.365	Cebus_capucinus
MGP_PahariEiJ_G0014405	Cpeb3	100	97.872	ENSCATG00000038447	CPEB3	100	96.953	Cercocebus_atys
MGP_PahariEiJ_G0014405	Cpeb3	100	100.000	ENSCLAG00000011817	CPEB3	100	97.600	Chinchilla_lanigera
MGP_PahariEiJ_G0014405	Cpeb3	100	96.671	ENSCSAG00000006579	CPEB3	100	96.671	Chlorocebus_sabaeus
MGP_PahariEiJ_G0014405	Cpeb3	90	87.634	ENSCHOG00000000272	-	100	90.083	Choloepus_hoffmanni
MGP_PahariEiJ_G0014405	Cpeb3	100	98.313	ENSCPBG00000023779	CPEB3	100	85.576	Chrysemys_picta_bellii
MGP_PahariEiJ_G0014405	Cpeb3	100	97.872	ENSCANG00000040306	CPEB3	100	96.953	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0014405	Cpeb3	100	99.026	ENSCGRG00001003846	Cpeb3	100	99.026	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0014405	Cpeb3	100	99.759	ENSCGRG00000002839	Cpeb3	100	99.759	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0014405	Cpeb3	100	76.786	ENSCSEG00000008423	cpeb3	100	72.403	Cynoglossus_semilaevis
MGP_PahariEiJ_G0014405	Cpeb3	100	84.670	ENSCVAG00000005998	cpeb3	100	70.259	Cyprinodon_variegatus
MGP_PahariEiJ_G0014405	Cpeb3	100	80.516	ENSDARG00000060103	cpeb3	100	66.953	Danio_rerio
MGP_PahariEiJ_G0014405	Cpeb3	100	91.231	ENSDNOG00000048639	CPEB3	100	90.523	Dasypus_novemcinctus
MGP_PahariEiJ_G0014405	Cpeb3	100	97.872	ENSDORG00000028940	Cpeb3	89	99.793	Dipodomys_ordii
MGP_PahariEiJ_G0014405	Cpeb3	100	89.639	ENSETEG00000000111	CPEB3	100	89.205	Echinops_telfairi
MGP_PahariEiJ_G0014405	Cpeb3	99	76.303	ENSEBUG00000010745	cpeb3	90	58.722	Eptatretus_burgeri
MGP_PahariEiJ_G0014405	Cpeb3	100	99.759	ENSEASG00005011095	CPEB3	100	97.917	Equus_asinus_asinus
MGP_PahariEiJ_G0014405	Cpeb3	100	99.759	ENSECAG00000000077	CPEB3	100	97.917	Equus_caballus
MGP_PahariEiJ_G0014405	Cpeb3	100	90.120	ENSELUG00000019251	cpeb3	100	74.856	Esox_lucius
MGP_PahariEiJ_G0014405	Cpeb3	100	97.636	ENSFCAG00000032380	CPEB3	100	97.222	Felis_catus
MGP_PahariEiJ_G0014405	Cpeb3	100	91.489	ENSFALG00000007952	CPEB3	87	85.530	Ficedula_albicollis
MGP_PahariEiJ_G0014405	Cpeb3	100	97.872	ENSFDAG00000016459	CPEB3	88	100.000	Fukomys_damarensis
MGP_PahariEiJ_G0014405	Cpeb3	100	86.811	ENSFHEG00000021371	cpeb3	100	69.571	Fundulus_heteroclitus
MGP_PahariEiJ_G0014405	Cpeb3	82	87.356	ENSGMOG00000008307	cpeb3	99	70.853	Gadus_morhua
MGP_PahariEiJ_G0014405	Cpeb3	100	98.795	ENSGALG00000006912	CPEB3	100	85.714	Gallus_gallus
MGP_PahariEiJ_G0014405	Cpeb3	99	86.667	ENSGACG00000002944	cpeb3	99	73.501	Gasterosteus_aculeatus
MGP_PahariEiJ_G0014405	Cpeb3	100	98.313	ENSGAGG00000008528	CPEB3	100	84.466	Gopherus_agassizii
MGP_PahariEiJ_G0014405	Cpeb3	100	100.000	ENSGGOG00000016441	CPEB3	100	96.953	Gorilla_gorilla
MGP_PahariEiJ_G0014405	Cpeb3	100	89.157	ENSHBUG00000004097	cpeb3	93	74.003	Haplochromis_burtoni
MGP_PahariEiJ_G0014405	Cpeb3	100	97.872	ENSHGLG00000014022	CPEB3	100	96.949	Heterocephalus_glaber_female
MGP_PahariEiJ_G0014405	Cpeb3	100	97.636	ENSHGLG00100005200	CPEB3	100	88.889	Heterocephalus_glaber_male
MGP_PahariEiJ_G0014405	Cpeb3	100	87.470	ENSHCOG00000005747	cpeb3	100	70.596	Hippocampus_comes
MGP_PahariEiJ_G0014405	Cpeb3	100	90.120	ENSIPUG00000018571	cpeb3	100	74.480	Ictalurus_punctatus
MGP_PahariEiJ_G0014405	Cpeb3	100	97.872	ENSSTOG00000028061	CPEB3	100	95.139	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0014405	Cpeb3	100	100.000	ENSJJAG00000009135	Cpeb3	100	100.000	Jaculus_jaculus
MGP_PahariEiJ_G0014405	Cpeb3	100	89.157	ENSLBEG00000025961	cpeb3	100	74.309	Labrus_bergylta
MGP_PahariEiJ_G0014405	Cpeb3	100	89.598	ENSLACG00000011307	CPEB3	92	81.034	Latimeria_chalumnae
MGP_PahariEiJ_G0014405	Cpeb3	100	88.180	ENSLOCG00000007131	cpeb3	100	75.519	Lepisosteus_oculatus
MGP_PahariEiJ_G0014405	Cpeb3	100	97.400	ENSLAFG00000018716	CPEB3	100	96.810	Loxodonta_africana
MGP_PahariEiJ_G0014405	Cpeb3	100	97.590	ENSMFAG00000025613	CPEB3	100	89.174	Macaca_fascicularis
MGP_PahariEiJ_G0014405	Cpeb3	100	97.872	ENSMMUG00000015050	CPEB3	100	96.537	Macaca_mulatta
MGP_PahariEiJ_G0014405	Cpeb3	100	97.872	ENSMNEG00000045465	CPEB3	100	97.091	Macaca_nemestrina
MGP_PahariEiJ_G0014405	Cpeb3	100	97.590	ENSMLEG00000031794	CPEB3	100	95.787	Mandrillus_leucophaeus
MGP_PahariEiJ_G0014405	Cpeb3	100	89.639	ENSMAMG00000012794	cpeb3	100	73.684	Mastacembelus_armatus
MGP_PahariEiJ_G0014405	Cpeb3	100	88.916	ENSMZEG00005012068	cpeb3	100	73.865	Maylandia_zebra
MGP_PahariEiJ_G0014405	Cpeb3	100	91.489	ENSMGAG00000009148	CPEB3	99	85.387	Meleagris_gallopavo
MGP_PahariEiJ_G0014405	Cpeb3	100	99.167	ENSMAUG00000002789	Cpeb3	100	99.167	Mesocricetus_auratus
MGP_PahariEiJ_G0014405	Cpeb3	100	99.759	ENSMICG00000026866	CPEB3	100	96.394	Microcebus_murinus
MGP_PahariEiJ_G0014405	Cpeb3	100	99.305	ENSMOCG00000016486	Cpeb3	100	99.305	Microtus_ochrogaster
MGP_PahariEiJ_G0014405	Cpeb3	94	84.439	ENSMMOG00000008209	cpeb3	88	73.574	Mola_mola
MGP_PahariEiJ_G0014405	Cpeb3	100	91.726	ENSMODG00000006673	CPEB3	100	84.584	Monodelphis_domestica
MGP_PahariEiJ_G0014405	Cpeb3	100	87.711	ENSMALG00000009305	cpeb3	93	95.270	Monopterus_albus
MGP_PahariEiJ_G0014405	Cpeb3	100	100.000	MGP_CAROLIEiJ_G0022910	Cpeb3	100	100.000	Mus_caroli
MGP_PahariEiJ_G0014405	Cpeb3	100	100.000	ENSMUSG00000039652	Cpeb3	100	100.000	Mus_musculus
MGP_PahariEiJ_G0014405	Cpeb3	100	100.000	MGP_SPRETEiJ_G0023829	Cpeb3	100	100.000	Mus_spretus
MGP_PahariEiJ_G0014405	Cpeb3	100	97.274	ENSMPUG00000017227	CPEB3	100	97.274	Mustela_putorius_furo
MGP_PahariEiJ_G0014405	Cpeb3	100	99.759	ENSNGAG00000015621	Cpeb3	100	97.775	Nannospalax_galili
MGP_PahariEiJ_G0014405	Cpeb3	100	83.848	ENSNBRG00000018343	cpeb3	91	72.792	Neolamprologus_brichardi
MGP_PahariEiJ_G0014405	Cpeb3	100	97.872	ENSNLEG00000012600	CPEB3	100	97.091	Nomascus_leucogenys
MGP_PahariEiJ_G0014405	Cpeb3	90	90.591	ENSMEUG00000009948	-	75	92.837	Notamacropus_eugenii
MGP_PahariEiJ_G0014405	Cpeb3	100	97.872	ENSODEG00000004591	CPEB3	100	96.033	Octodon_degus
MGP_PahariEiJ_G0014405	Cpeb3	78	95.758	ENSOANG00000015723	-	100	98.485	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0014405	Cpeb3	100	97.872	ENSOCUG00000010454	CPEB3	100	97.083	Oryctolagus_cuniculus
MGP_PahariEiJ_G0014405	Cpeb3	100	82.494	ENSORLG00000000726	cpeb3	100	71.243	Oryzias_latipes
MGP_PahariEiJ_G0014405	Cpeb3	100	83.373	ENSORLG00020004475	cpeb3	100	71.920	Oryzias_latipes_hni
MGP_PahariEiJ_G0014405	Cpeb3	100	86.571	ENSORLG00015011683	cpeb3	100	72.063	Oryzias_latipes_hsok
MGP_PahariEiJ_G0014405	Cpeb3	100	83.133	ENSOMEG00000018265	cpeb3	93	71.083	Oryzias_melastigma
MGP_PahariEiJ_G0014405	Cpeb3	100	93.976	ENSOGAG00000002002	CPEB3	100	93.957	Otolemur_garnettii
MGP_PahariEiJ_G0014405	Cpeb3	100	97.242	ENSOARG00000016671	CPEB3	100	97.242	Ovis_aries
MGP_PahariEiJ_G0014405	Cpeb3	100	97.349	ENSPPAG00000031528	CPEB3	100	97.996	Pan_paniscus
MGP_PahariEiJ_G0014405	Cpeb3	100	97.097	ENSPPRG00000015654	CPEB3	100	97.097	Panthera_pardus
MGP_PahariEiJ_G0014405	Cpeb3	100	97.349	ENSPTIG00000012018	CPEB3	97	99.655	Panthera_tigris_altaica
MGP_PahariEiJ_G0014405	Cpeb3	100	97.872	ENSPTRG00000002753	CPEB3	100	96.953	Pan_troglodytes
MGP_PahariEiJ_G0014405	Cpeb3	100	97.590	ENSPANG00000021561	CPEB3	100	96.170	Papio_anubis
MGP_PahariEiJ_G0014405	Cpeb3	100	90.361	ENSPKIG00000015878	cpeb3	100	76.967	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0014405	Cpeb3	100	81.055	ENSPMGG00000022722	cpeb3	100	64.327	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0014405	Cpeb3	100	99.583	ENSPEMG00000008448	Cpeb3	100	99.583	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0014405	Cpeb3	100	99.036	ENSPCIG00000017302	CPEB3	100	85.981	Phascolarctos_cinereus
MGP_PahariEiJ_G0014405	Cpeb3	100	81.368	ENSPFOG00000011231	cpeb3	100	70.429	Poecilia_formosa
MGP_PahariEiJ_G0014405	Cpeb3	100	87.019	ENSPLAG00000002852	cpeb3	100	71.191	Poecilia_latipinna
MGP_PahariEiJ_G0014405	Cpeb3	100	87.019	ENSPMEG00000021572	cpeb3	100	72.022	Poecilia_mexicana
MGP_PahariEiJ_G0014405	Cpeb3	100	87.260	ENSPREG00000003085	cpeb3	100	72.161	Poecilia_reticulata
MGP_PahariEiJ_G0014405	Cpeb3	100	92.330	ENSPPYG00000002481	CPEB3	100	92.330	Pongo_abelii
MGP_PahariEiJ_G0014405	Cpeb3	100	91.084	ENSPCAG00000012417	CPEB3	100	90.577	Procavia_capensis
MGP_PahariEiJ_G0014405	Cpeb3	100	97.636	ENSPCOG00000023690	CPEB3	100	96.806	Propithecus_coquereli
MGP_PahariEiJ_G0014405	Cpeb3	90	96.505	ENSPVAG00000007664	CPEB3	80	99.174	Pteropus_vampyrus
MGP_PahariEiJ_G0014405	Cpeb3	100	89.157	ENSPNYG00000005300	cpeb3	100	74.003	Pundamilia_nyererei
MGP_PahariEiJ_G0014405	Cpeb3	100	89.398	ENSPNAG00000012111	cpeb3	100	75.829	Pygocentrus_nattereri
MGP_PahariEiJ_G0014405	Cpeb3	100	97.187	ENSRNOG00000020689	Cpeb3	94	97.187	Rattus_norvegicus
MGP_PahariEiJ_G0014405	Cpeb3	100	97.872	ENSRBIG00000041079	CPEB3	100	96.537	Rhinopithecus_bieti
MGP_PahariEiJ_G0014405	Cpeb3	100	100.000	ENSRROG00000031558	CPEB3	100	96.537	Rhinopithecus_roxellana
MGP_PahariEiJ_G0014405	Cpeb3	100	93.735	ENSSBOG00000035843	CPEB3	100	97.872	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0014405	Cpeb3	53	99.087	ENSSHAG00000018596	-	96	99.087	Sarcophilus_harrisii
MGP_PahariEiJ_G0014405	Cpeb3	100	86.506	ENSSFOG00015004974	cpeb3	100	74.392	Scleropages_formosus
MGP_PahariEiJ_G0014405	Cpeb3	100	77.197	ENSSFOG00015018275	-	99	80.637	Scleropages_formosus
MGP_PahariEiJ_G0014405	Cpeb3	100	89.880	ENSSMAG00000013924	cpeb3	100	75.036	Scophthalmus_maximus
MGP_PahariEiJ_G0014405	Cpeb3	100	85.542	ENSSDUG00000019766	cpeb3	100	74.175	Seriola_dumerili
MGP_PahariEiJ_G0014405	Cpeb3	100	89.639	ENSSLDG00000021438	cpeb3	100	74.170	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0014405	Cpeb3	90	97.043	ENSSARG00000001994	CPEB3	100	99.725	Sorex_araneus
MGP_PahariEiJ_G0014405	Cpeb3	73	98.671	ENSSPUG00000003601	CPEB3	94	99.087	Sphenodon_punctatus
MGP_PahariEiJ_G0014405	Cpeb3	100	89.639	ENSSPAG00000004725	cpeb3	100	75.069	Stegastes_partitus
MGP_PahariEiJ_G0014405	Cpeb3	100	99.759	ENSSSCG00000010468	CPEB3	100	97.399	Sus_scrofa
MGP_PahariEiJ_G0014405	Cpeb3	100	96.690	ENSTGUG00000008988	CPEB3	100	85.853	Taeniopygia_guttata
MGP_PahariEiJ_G0014405	Cpeb3	53	92.760	ENSTRUG00000011309	cpeb3	88	92.760	Takifugu_rubripes
MGP_PahariEiJ_G0014405	Cpeb3	100	90.602	ENSTBEG00000013125	-	60	92.548	Tupaia_belangeri
MGP_PahariEiJ_G0014405	Cpeb3	100	93.253	ENSTTRG00000012334	CPEB3	100	91.631	Tursiops_truncatus
MGP_PahariEiJ_G0014405	Cpeb3	100	97.867	ENSUAMG00000010827	CPEB3	100	93.463	Ursus_americanus
MGP_PahariEiJ_G0014405	Cpeb3	73	96.358	ENSUMAG00000001870	-	97	98.951	Ursus_maritimus
MGP_PahariEiJ_G0014405	Cpeb3	100	97.131	ENSVVUG00000021375	CPEB3	100	97.131	Vulpes_vulpes
MGP_PahariEiJ_G0014405	Cpeb3	100	87.943	ENSXETG00000012190	cpeb3	98	76.923	Xenopus_tropicalis
MGP_PahariEiJ_G0014405	Cpeb3	100	83.173	ENSXCOG00000006122	cpeb3	100	71.201	Xiphophorus_couchianus
MGP_PahariEiJ_G0014405	Cpeb3	100	84.375	ENSXMAG00000007652	cpeb3	94	93.836	Xiphophorus_maculatus