EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0014447 (Gene tree)
Gene ID: 110334210
Gene Symbol: Rrp12
Alias: -
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 35702 bases
Position: chr1:153283353-153319054
Accession: 110334210
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0021750	NUC173	PF08161.12	5.2e-76	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0021750	-	4325	XM_021216101	MGP_PahariEiJ_P0021750	1294 (aa)	XP_021071760	UPI000A3074F8

Gene Model

Click here to download MGP_PahariEiJ_G0014447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0014447's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0014447	Rrp12	99	89.977	ENSG00000052749	RRP12	100	96.875	Homo_sapiens
MGP_PahariEiJ_G0014447	Rrp12	99	63.215	ENSAPOG00000013355	rrp12	100	62.730	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0014447	Rrp12	99	88.684	ENSAMEG00000000134	RRP12	99	88.838	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0014447	Rrp12	99	64.158	ENSACIG00000022673	rrp12	100	64.049	Amphilophus_citrinellus
MGP_PahariEiJ_G0014447	Rrp12	99	64.264	ENSAOCG00000016149	rrp12	100	63.923	Amphiprion_ocellaris
MGP_PahariEiJ_G0014447	Rrp12	99	63.777	ENSAPEG00000016023	rrp12	100	63.441	Amphiprion_percula
MGP_PahariEiJ_G0014447	Rrp12	99	63.362	ENSATEG00000022627	rrp12	100	63.105	Anabas_testudineus
MGP_PahariEiJ_G0014447	Rrp12	97	65.028	ENSAPLG00000014387	RRP12	99	65.186	Anas_platyrhynchos
MGP_PahariEiJ_G0014447	Rrp12	99	65.512	ENSACAG00000002175	RRP12	99	65.666	Anolis_carolinensis
MGP_PahariEiJ_G0014447	Rrp12	99	88.794	ENSANAG00000037485	RRP12	99	89.026	Aotus_nancymaae
MGP_PahariEiJ_G0014447	Rrp12	99	63.643	ENSACLG00000007354	rrp12	100	63.615	Astatotilapia_calliptera
MGP_PahariEiJ_G0014447	Rrp12	99	60.833	ENSAMXG00000012852	rrp12	99	61.544	Astyanax_mexicanus
MGP_PahariEiJ_G0014447	Rrp12	99	89.522	ENSBTAG00000002191	RRP12	99	89.445	Bos_taurus
MGP_PahariEiJ_G0014447	Rrp12	85	88.556	ENSCJAG00000016549	-	99	88.647	Callithrix_jacchus
MGP_PahariEiJ_G0014447	Rrp12	99	88.923	ENSCAFG00000009043	RRP12	99	88.923	Canis_familiaris
MGP_PahariEiJ_G0014447	Rrp12	99	88.923	ENSCAFG00020005991	RRP12	99	88.923	Canis_lupus_dingo
MGP_PahariEiJ_G0014447	Rrp12	99	86.840	ENSCHIG00000011876	RRP12	99	86.534	Capra_hircus
MGP_PahariEiJ_G0014447	Rrp12	53	84.195	ENSTSYG00000030210	-	99	84.483	Carlito_syrichta
MGP_PahariEiJ_G0014447	Rrp12	97	81.855	ENSCAPG00000008991	RRP12	98	81.775	Cavia_aperea
MGP_PahariEiJ_G0014447	Rrp12	100	89.892	ENSCPOG00000004215	RRP12	100	89.815	Cavia_porcellus
MGP_PahariEiJ_G0014447	Rrp12	80	87.870	ENSCCAG00000024088	RRP12	99	92.457	Cebus_capucinus
MGP_PahariEiJ_G0014447	Rrp12	70	86.294	ENSCCAG00000033123	-	83	86.952	Cebus_capucinus
MGP_PahariEiJ_G0014447	Rrp12	99	83.784	ENSCATG00000045310	RRP12	99	83.784	Cercocebus_atys
MGP_PahariEiJ_G0014447	Rrp12	100	89.660	ENSCLAG00000003753	RRP12	100	89.815	Chinchilla_lanigera
MGP_PahariEiJ_G0014447	Rrp12	88	89.529	ENSCSAG00000005877	RRP12	99	89.703	Chlorocebus_sabaeus
MGP_PahariEiJ_G0014447	Rrp12	59	90.769	ENSCHOG00000003095	-	61	90.769	Choloepus_hoffmanni
MGP_PahariEiJ_G0014447	Rrp12	94	72.660	ENSCPBG00000011935	RRP12	97	72.906	Chrysemys_picta_bellii
MGP_PahariEiJ_G0014447	Rrp12	64	39.486	ENSCSAVG00000006059	-	99	39.273	Ciona_savignyi
MGP_PahariEiJ_G0014447	Rrp12	99	89.977	ENSCANG00000031653	RRP12	99	90.132	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0014447	Rrp12	90	94.615	ENSCGRG00001004338	Rrp12	99	94.615	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0014447	Rrp12	99	93.117	ENSCGRG00000011965	Rrp12	99	93.117	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0014447	Rrp12	99	61.864	ENSCSEG00000007799	rrp12	99	61.787	Cynoglossus_semilaevis
MGP_PahariEiJ_G0014447	Rrp12	99	64.469	ENSCVAG00000003418	rrp12	100	64.126	Cyprinodon_variegatus
MGP_PahariEiJ_G0014447	Rrp12	99	61.111	ENSDARG00000022410	rrp12	99	61.747	Danio_rerio
MGP_PahariEiJ_G0014447	Rrp12	100	86.897	ENSDNOG00000005120	RRP12	100	85.900	Dasypus_novemcinctus
MGP_PahariEiJ_G0014447	Rrp12	99	90.278	ENSDORG00000009199	Rrp12	99	90.278	Dipodomys_ordii
MGP_PahariEiJ_G0014447	Rrp12	91	78.378	ENSETEG00000002455	RRP12	92	78.378	Echinops_telfairi
MGP_PahariEiJ_G0014447	Rrp12	83	57.333	ENSEBUG00000006555	rrp12	98	63.830	Eptatretus_burgeri
MGP_PahariEiJ_G0014447	Rrp12	99	89.591	ENSEASG00005008693	RRP12	99	89.668	Equus_asinus_asinus
MGP_PahariEiJ_G0014447	Rrp12	94	89.746	ENSECAG00000010892	RRP12	99	89.828	Equus_caballus
MGP_PahariEiJ_G0014447	Rrp12	64	82.540	ENSEEUG00000005447	-	65	82.540	Erinaceus_europaeus
MGP_PahariEiJ_G0014447	Rrp12	99	63.867	ENSELUG00000010510	rrp12	100	63.499	Esox_lucius
MGP_PahariEiJ_G0014447	Rrp12	99	89.385	ENSFCAG00000028639	RRP12	99	90.132	Felis_catus
MGP_PahariEiJ_G0014447	Rrp12	94	71.358	ENSFALG00000008458	RRP12	100	71.113	Ficedula_albicollis
MGP_PahariEiJ_G0014447	Rrp12	99	89.189	ENSFDAG00000019108	RRP12	95	89.344	Fukomys_damarensis
MGP_PahariEiJ_G0014447	Rrp12	99	58.527	ENSFHEG00000004148	rrp12	100	58.122	Fundulus_heteroclitus
MGP_PahariEiJ_G0014447	Rrp12	99	58.243	ENSGMOG00000004188	rrp12	99	58.320	Gadus_morhua
MGP_PahariEiJ_G0014447	Rrp12	99	69.308	ENSGALG00000041331	RRP12	96	70.588	Gallus_gallus
MGP_PahariEiJ_G0014447	Rrp12	99	63.848	ENSGAFG00000009038	rrp12	100	63.510	Gambusia_affinis
MGP_PahariEiJ_G0014447	Rrp12	99	61.395	ENSGACG00000007175	rrp12	100	61.000	Gasterosteus_aculeatus
MGP_PahariEiJ_G0014447	Rrp12	67	74.711	ENSGAGG00000019169	RRP12	96	74.711	Gopherus_agassizii
MGP_PahariEiJ_G0014447	Rrp12	99	90.208	ENSGGOG00000014850	RRP12	99	90.362	Gorilla_gorilla
MGP_PahariEiJ_G0014447	Rrp12	99	63.798	ENSHBUG00000023527	rrp12	100	63.769	Haplochromis_burtoni
MGP_PahariEiJ_G0014447	Rrp12	99	89.266	ENSHGLG00000016772	RRP12	99	89.421	Heterocephalus_glaber_female
MGP_PahariEiJ_G0014447	Rrp12	99	89.266	ENSHGLG00100015110	RRP12	99	89.421	Heterocephalus_glaber_male
MGP_PahariEiJ_G0014447	Rrp12	100	62.085	ENSHCOG00000019519	rrp12	100	62.085	Hippocampus_comes
MGP_PahariEiJ_G0014447	Rrp12	100	60.756	ENSIPUG00000000311	RRP12	100	61.248	Ictalurus_punctatus
MGP_PahariEiJ_G0014447	Rrp12	99	90.579	ENSSTOG00000006515	RRP12	99	90.579	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0014447	Rrp12	96	91.106	ENSJJAG00000000110	Rrp12	99	91.106	Jaculus_jaculus
MGP_PahariEiJ_G0014447	Rrp12	99	63.798	ENSKMAG00000020621	rrp12	100	63.587	Kryptolebias_marmoratus
MGP_PahariEiJ_G0014447	Rrp12	99	61.437	ENSLBEG00000015335	rrp12	99	61.669	Labrus_bergylta
MGP_PahariEiJ_G0014447	Rrp12	78	57.681	ENSLACG00000016633	RRP12	81	67.041	Latimeria_chalumnae
MGP_PahariEiJ_G0014447	Rrp12	100	62.510	ENSLOCG00000003846	rrp12	100	62.587	Lepisosteus_oculatus
MGP_PahariEiJ_G0014447	Rrp12	99	89.385	ENSLAFG00000015965	RRP12	99	89.000	Loxodonta_africana
MGP_PahariEiJ_G0014447	Rrp12	99	90.054	ENSMFAG00000041558	RRP12	99	90.208	Macaca_fascicularis
MGP_PahariEiJ_G0014447	Rrp12	99	90.054	ENSMMUG00000019634	RRP12	99	90.208	Macaca_mulatta
MGP_PahariEiJ_G0014447	Rrp12	99	85.813	ENSMNEG00000036759	RRP12	99	89.474	Macaca_nemestrina
MGP_PahariEiJ_G0014447	Rrp12	99	84.170	ENSMLEG00000041317	RRP12	99	90.132	Mandrillus_leucophaeus
MGP_PahariEiJ_G0014447	Rrp12	99	62.519	ENSMAMG00000002964	rrp12	100	62.817	Mastacembelus_armatus
MGP_PahariEiJ_G0014447	Rrp12	99	63.798	ENSMZEG00005003241	rrp12	100	63.769	Maylandia_zebra
MGP_PahariEiJ_G0014447	Rrp12	99	68.203	ENSMGAG00000009829	RRP12	99	68.049	Meleagris_gallopavo
MGP_PahariEiJ_G0014447	Rrp12	99	91.133	ENSMAUG00000020743	Rrp12	99	91.415	Mesocricetus_auratus
MGP_PahariEiJ_G0014447	Rrp12	99	89.368	ENSMICG00000007624	RRP12	99	89.368	Microcebus_murinus
MGP_PahariEiJ_G0014447	Rrp12	100	94.745	ENSMOCG00000006753	Rrp12	100	94.745	Microtus_ochrogaster
MGP_PahariEiJ_G0014447	Rrp12	99	62.616	ENSMMOG00000010708	rrp12	99	62.693	Mola_mola
MGP_PahariEiJ_G0014447	Rrp12	99	78.638	ENSMODG00000004315	RRP12	99	78.903	Monodelphis_domestica
MGP_PahariEiJ_G0014447	Rrp12	99	60.418	ENSMALG00000016560	rrp12	99	63.484	Monopterus_albus
MGP_PahariEiJ_G0014447	Rrp12	99	97.088	MGP_CAROLIEiJ_G0022957	Rrp12	99	97.088	Mus_caroli
MGP_PahariEiJ_G0014447	Rrp12	99	97.912	ENSMUSG00000035049	Rrp12	99	97.912	Mus_musculus
MGP_PahariEiJ_G0014447	Rrp12	99	98.144	MGP_SPRETEiJ_G0023878	Rrp12	99	98.144	Mus_spretus
MGP_PahariEiJ_G0014447	Rrp12	99	88.615	ENSMPUG00000017046	RRP12	99	88.462	Mustela_putorius_furo
MGP_PahariEiJ_G0014447	Rrp12	99	89.623	ENSMLUG00000017160	RRP12	99	89.854	Myotis_lucifugus
MGP_PahariEiJ_G0014447	Rrp12	99	92.736	ENSNGAG00000024144	Rrp12	99	92.813	Nannospalax_galili
MGP_PahariEiJ_G0014447	Rrp12	99	63.354	ENSNBRG00000009987	rrp12	100	63.020	Neolamprologus_brichardi
MGP_PahariEiJ_G0014447	Rrp12	92	90.132	ENSNLEG00000013762	RRP12	99	90.132	Nomascus_leucogenys
MGP_PahariEiJ_G0014447	Rrp12	100	73.534	ENSMEUG00000003185	RRP12	100	73.380	Notamacropus_eugenii
MGP_PahariEiJ_G0014447	Rrp12	94	85.761	ENSOPRG00000005001	RRP12	94	85.599	Ochotona_princeps
MGP_PahariEiJ_G0014447	Rrp12	100	88.417	ENSODEG00000016439	RRP12	100	88.803	Octodon_degus
MGP_PahariEiJ_G0014447	Rrp12	99	64.031	ENSONIG00000009528	rrp12	100	64.154	Oreochromis_niloticus
MGP_PahariEiJ_G0014447	Rrp12	100	72.427	ENSOANG00000006560	RRP12	100	72.427	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0014447	Rrp12	99	89.815	ENSOCUG00000005662	RRP12	99	89.892	Oryctolagus_cuniculus
MGP_PahariEiJ_G0014447	Rrp12	99	64.081	ENSORLG00000008688	rrp12	100	63.972	Oryzias_latipes
MGP_PahariEiJ_G0014447	Rrp12	97	64.455	ENSORLG00020002355	rrp12	99	64.692	Oryzias_latipes_hni
MGP_PahariEiJ_G0014447	Rrp12	99	64.391	ENSORLG00015006709	rrp12	100	64.434	Oryzias_latipes_hsok
MGP_PahariEiJ_G0014447	Rrp12	97	64.771	ENSOMEG00000002609	rrp12	99	65.166	Oryzias_melastigma
MGP_PahariEiJ_G0014447	Rrp12	99	88.335	ENSOGAG00000001626	RRP12	99	87.874	Otolemur_garnettii
MGP_PahariEiJ_G0014447	Rrp12	99	88.000	ENSOARG00000009681	RRP12	99	87.923	Ovis_aries
MGP_PahariEiJ_G0014447	Rrp12	97	89.945	ENSPPAG00000043885	RRP12	99	90.132	Pan_paniscus
MGP_PahariEiJ_G0014447	Rrp12	99	89.308	ENSPPRG00000002029	RRP12	99	90.789	Panthera_pardus
MGP_PahariEiJ_G0014447	Rrp12	97	88.787	ENSPTIG00000004428	RRP12	99	90.132	Panthera_tigris_altaica
MGP_PahariEiJ_G0014447	Rrp12	97	89.945	ENSPTRG00000002806	RRP12	99	90.132	Pan_troglodytes
MGP_PahariEiJ_G0014447	Rrp12	99	89.977	ENSPANG00000021360	RRP12	99	90.132	Papio_anubis
MGP_PahariEiJ_G0014447	Rrp12	100	64.313	ENSPKIG00000016516	rrp12	99	64.390	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0014447	Rrp12	99	62.345	ENSPMGG00000020217	rrp12	100	62.018	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0014447	Rrp12	99	95.440	ENSPEMG00000008437	Rrp12	99	95.440	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0014447	Rrp12	99	47.519	ENSPMAG00000007493	rrp12	99	47.641	Petromyzon_marinus
MGP_PahariEiJ_G0014447	Rrp12	96	82.550	ENSPCIG00000002157	RRP12	100	78.516	Phascolarctos_cinereus
MGP_PahariEiJ_G0014447	Rrp12	99	63.693	ENSPFOG00000014975	rrp12	100	63.356	Poecilia_formosa
MGP_PahariEiJ_G0014447	Rrp12	99	63.460	ENSPLAG00000009840	rrp12	100	63.125	Poecilia_latipinna
MGP_PahariEiJ_G0014447	Rrp12	99	63.848	ENSPMEG00000021871	rrp12	100	63.510	Poecilia_mexicana
MGP_PahariEiJ_G0014447	Rrp12	99	63.052	ENSPREG00000020950	rrp12	100	62.721	Poecilia_reticulata
MGP_PahariEiJ_G0014447	Rrp12	99	88.204	ENSPPYG00000002528	RRP12	99	88.358	Pongo_abelii
MGP_PahariEiJ_G0014447	Rrp12	94	91.525	ENSPCAG00000008967	RRP12	94	91.525	Procavia_capensis
MGP_PahariEiJ_G0014447	Rrp12	99	90.347	ENSPCOG00000014009	RRP12	99	90.347	Propithecus_coquereli
MGP_PahariEiJ_G0014447	Rrp12	99	84.834	ENSPVAG00000003370	RRP12	100	85.142	Pteropus_vampyrus
MGP_PahariEiJ_G0014447	Rrp12	99	63.975	ENSPNYG00000009451	rrp12	100	63.923	Pundamilia_nyererei
MGP_PahariEiJ_G0014447	Rrp12	100	61.864	ENSPNAG00000007658	rrp12	100	62.404	Pygocentrus_nattereri
MGP_PahariEiJ_G0014447	Rrp12	99	96.520	ENSRNOG00000048495	Rrp12	99	96.520	Rattus_norvegicus
MGP_PahariEiJ_G0014447	Rrp12	99	90.054	ENSRBIG00000021296	RRP12	99	90.208	Rhinopithecus_bieti
MGP_PahariEiJ_G0014447	Rrp12	99	90.208	ENSRROG00000032482	RRP12	99	90.362	Rhinopithecus_roxellana
MGP_PahariEiJ_G0014447	Rrp12	99	88.897	ENSSBOG00000030992	RRP12	100	88.816	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0014447	Rrp12	99	77.641	ENSSHAG00000018275	RRP12	99	77.949	Sarcophilus_harrisii
MGP_PahariEiJ_G0014447	Rrp12	99	63.763	ENSSFOG00015016400	rrp12	99	63.685	Scleropages_formosus
MGP_PahariEiJ_G0014447	Rrp12	99	62.529	ENSSMAG00000004047	rrp12	100	62.923	Scophthalmus_maximus
MGP_PahariEiJ_G0014447	Rrp12	99	63.411	ENSSDUG00000022871	rrp12	100	63.125	Seriola_dumerili
MGP_PahariEiJ_G0014447	Rrp12	99	63.023	ENSSLDG00000003038	rrp12	100	62.895	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0014447	Rrp12	100	67.893	ENSSPUG00000012221	RRP12	100	68.276	Sphenodon_punctatus
MGP_PahariEiJ_G0014447	Rrp12	99	63.953	ENSSPAG00000002261	rrp12	100	63.846	Stegastes_partitus
MGP_PahariEiJ_G0014447	Rrp12	100	89.692	ENSSSCG00000010514	RRP12	100	89.692	Sus_scrofa
MGP_PahariEiJ_G0014447	Rrp12	89	68.641	ENSTGUG00000009711	RRP12	100	68.554	Taeniopygia_guttata
MGP_PahariEiJ_G0014447	Rrp12	100	58.814	ENSTRUG00000012017	rrp12	100	58.891	Takifugu_rubripes
MGP_PahariEiJ_G0014447	Rrp12	100	62.462	ENSTNIG00000016522	rrp12	100	62.615	Tetraodon_nigroviridis
MGP_PahariEiJ_G0014447	Rrp12	78	89.968	ENSTBEG00000004907	RRP12	80	89.968	Tupaia_belangeri
MGP_PahariEiJ_G0014447	Rrp12	100	85.450	ENSTTRG00000009878	RRP12	100	85.065	Tursiops_truncatus
MGP_PahariEiJ_G0014447	Rrp12	99	88.932	ENSUAMG00000009092	RRP12	99	88.701	Ursus_americanus
MGP_PahariEiJ_G0014447	Rrp12	99	86.364	ENSUMAG00000021621	RRP12	99	86.133	Ursus_maritimus
MGP_PahariEiJ_G0014447	Rrp12	99	88.751	ENSVVUG00000023168	RRP12	99	88.751	Vulpes_vulpes
MGP_PahariEiJ_G0014447	Rrp12	99	67.590	ENSXETG00000003430	rrp12	99	67.256	Xenopus_tropicalis
MGP_PahariEiJ_G0014447	Rrp12	90	65.206	ENSXCOG00000012082	rrp12	99	61.484	Xiphophorus_couchianus
MGP_PahariEiJ_G0014447	Rrp12	99	63.848	ENSXMAG00000013498	rrp12	100	63.587	Xiphophorus_maculatus