EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0014510 (Gene tree)
Gene ID: 110332933
Gene Symbol: Npm3
Alias: Nub1
Full Name: nucleophosmin/nucleoplasmin 3
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 1875 bases
Position: chr1:157093614-157095488
Accession: 110332933
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0021937	Nucleoplasmin	PF03066.15	3.4e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0021938	-	689	-	-	- (aa)	-	-
MGP_PahariEiJ_T0021937	-	902	-	MGP_PahariEiJ_P0021937	174 (aa)	XP_021069977	UPI000A310EDE

Gene Model

Click here to download MGP_PahariEiJ_G0014510's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0014510's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0014510	Npm3	94	83.333	ENSG00000107833	NPM3	100	84.831	Homo_sapiens
MGP_PahariEiJ_G0014510	Npm3	66	50.862	ENSAPOG00000013083	npm3	70	50.435	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0014510	Npm3	94	82.635	ENSAMEG00000017639	-	100	84.181	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0014510	Npm3	85	62.500	ENSAMEG00000019414	-	90	62.500	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0014510	Npm3	79	47.143	ENSACIG00000022586	npm3	85	47.143	Amphilophus_citrinellus
MGP_PahariEiJ_G0014510	Npm3	61	51.887	ENSAOCG00000009376	npm3	69	50.000	Amphiprion_ocellaris
MGP_PahariEiJ_G0014510	Npm3	61	51.887	ENSAPEG00000015863	npm3	69	50.000	Amphiprion_percula
MGP_PahariEiJ_G0014510	Npm3	61	51.887	ENSATEG00000022752	npm3	66	51.402	Anabas_testudineus
MGP_PahariEiJ_G0014510	Npm3	57	73.000	ENSAPLG00000010935	NPM3	87	60.584	Anas_platyrhynchos
MGP_PahariEiJ_G0014510	Npm3	59	66.019	ENSACAG00000011936	NPM3	86	55.634	Anolis_carolinensis
MGP_PahariEiJ_G0014510	Npm3	94	70.060	ENSANAG00000023070	-	96	70.060	Aotus_nancymaae
MGP_PahariEiJ_G0014510	Npm3	100	71.751	ENSANAG00000033290	-	94	70.732	Aotus_nancymaae
MGP_PahariEiJ_G0014510	Npm3	100	84.270	ENSANAG00000027082	-	100	84.270	Aotus_nancymaae
MGP_PahariEiJ_G0014510	Npm3	84	82.993	ENSANAG00000023832	-	69	82.877	Aotus_nancymaae
MGP_PahariEiJ_G0014510	Npm3	61	51.887	ENSACLG00000007854	npm3	89	47.222	Astatotilapia_calliptera
MGP_PahariEiJ_G0014510	Npm3	61	53.774	ENSAMXG00000039828	npm3	54	54.808	Astyanax_mexicanus
MGP_PahariEiJ_G0014510	Npm3	97	84.795	ENSBTAG00000016335	NPM3	97	85.965	Bos_taurus
MGP_PahariEiJ_G0014510	Npm3	100	82.584	ENSCJAG00000017650	NPM3	94	82.738	Callithrix_jacchus
MGP_PahariEiJ_G0014510	Npm3	94	84.848	ENSCAFG00000009919	NPM3	87	87.429	Canis_familiaris
MGP_PahariEiJ_G0014510	Npm3	94	84.848	ENSCAFG00020009185	NPM3	99	87.429	Canis_lupus_dingo
MGP_PahariEiJ_G0014510	Npm3	99	58.140	ENSCHIG00000016052	-	92	57.407	Capra_hircus
MGP_PahariEiJ_G0014510	Npm3	97	84.795	ENSCHIG00000024055	-	91	85.714	Capra_hircus
MGP_PahariEiJ_G0014510	Npm3	94	46.626	ENSCAPG00000016606	NPM3	94	46.951	Cavia_aperea
MGP_PahariEiJ_G0014510	Npm3	94	82.927	ENSCPOG00000006301	NPM3	95	82.927	Cavia_porcellus
MGP_PahariEiJ_G0014510	Npm3	94	82.738	ENSCCAG00000031043	-	100	83.146	Cebus_capucinus
MGP_PahariEiJ_G0014510	Npm3	100	69.663	ENSCCAG00000029457	-	94	70.238	Cebus_capucinus
MGP_PahariEiJ_G0014510	Npm3	94	84.524	ENSCATG00000013755	NPM3	100	84.831	Cercocebus_atys
MGP_PahariEiJ_G0014510	Npm3	94	84.524	ENSCSAG00000005509	NPM3	100	84.831	Chlorocebus_sabaeus
MGP_PahariEiJ_G0014510	Npm3	94	61.585	ENSCPBG00000003817	NPM3	97	61.350	Chrysemys_picta_bellii
MGP_PahariEiJ_G0014510	Npm3	94	82.036	ENSCANG00000020300	NPM3	100	84.181	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0014510	Npm3	100	88.571	ENSCGRG00001013345	Npm3	100	92.000	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0014510	Npm3	78	86.029	ENSCGRG00000015351	Npm3	85	89.130	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0014510	Npm3	61	46.018	ENSCSEG00000007944	npm3	76	44.882	Cynoglossus_semilaevis
MGP_PahariEiJ_G0014510	Npm3	61	50.459	ENSCVAG00000003305	npm3	77	46.512	Cyprinodon_variegatus
MGP_PahariEiJ_G0014510	Npm3	63	50.909	ENSDARG00000103594	npm3	88	47.552	Danio_rerio
MGP_PahariEiJ_G0014510	Npm3	100	80.682	ENSDORG00000003491	Npm3	94	80.723	Dipodomys_ordii
MGP_PahariEiJ_G0014510	Npm3	99	75.706	ENSETEG00000006307	NPM3	99	77.966	Echinops_telfairi
MGP_PahariEiJ_G0014510	Npm3	94	80.240	ENSEASG00005008834	NPM3	100	82.486	Equus_asinus_asinus
MGP_PahariEiJ_G0014510	Npm3	94	80.240	ENSECAG00000007524	NPM3	100	82.486	Equus_caballus
MGP_PahariEiJ_G0014510	Npm3	64	51.786	ENSELUG00000021730	npm3	85	47.143	Esox_lucius
MGP_PahariEiJ_G0014510	Npm3	100	85.227	ENSFCAG00000007178	NPM3	100	86.364	Felis_catus
MGP_PahariEiJ_G0014510	Npm3	66	63.478	ENSFALG00000008586	NPM3	91	59.028	Ficedula_albicollis
MGP_PahariEiJ_G0014510	Npm3	61	80.374	ENSFDAG00000016537	NPM3	100	80.374	Fukomys_damarensis
MGP_PahariEiJ_G0014510	Npm3	70	48.361	ENSFHEG00000003983	npm3	87	44.203	Fundulus_heteroclitus
MGP_PahariEiJ_G0014510	Npm3	70	45.902	ENSGMOG00000004317	npm3	99	42.857	Gadus_morhua
MGP_PahariEiJ_G0014510	Npm3	60	67.619	ENSGALG00000032329	NPM3	95	59.286	Gallus_gallus
MGP_PahariEiJ_G0014510	Npm3	76	46.212	ENSGAFG00000009135	npm3	79	46.667	Gambusia_affinis
MGP_PahariEiJ_G0014510	Npm3	61	52.830	ENSGACG00000007294	npm3	62	52.830	Gasterosteus_aculeatus
MGP_PahariEiJ_G0014510	Npm3	77	65.672	ENSGAGG00000004081	NPM3	88	60.256	Gopherus_agassizii
MGP_PahariEiJ_G0014510	Npm3	94	82.738	ENSGGOG00000027500	NPM3	100	84.270	Gorilla_gorilla
MGP_PahariEiJ_G0014510	Npm3	61	50.943	ENSHBUG00000023704	npm3	89	48.592	Haplochromis_burtoni
MGP_PahariEiJ_G0014510	Npm3	100	79.310	ENSHGLG00000019118	NPM3	100	78.736	Heterocephalus_glaber_female
MGP_PahariEiJ_G0014510	Npm3	77	78.358	ENSHGLG00100010926	NPM3	100	77.612	Heterocephalus_glaber_male
MGP_PahariEiJ_G0014510	Npm3	61	47.664	ENSHCOG00000019322	npm3	64	47.222	Hippocampus_comes
MGP_PahariEiJ_G0014510	Npm3	63	52.727	ENSIPUG00000008204	npm3	72	51.786	Ictalurus_punctatus
MGP_PahariEiJ_G0014510	Npm3	99	82.386	ENSSTOG00000022621	NPM3	94	83.735	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0014510	Npm3	100	82.486	ENSJJAG00000018907	Npm3	100	83.051	Jaculus_jaculus
MGP_PahariEiJ_G0014510	Npm3	75	47.328	ENSKMAG00000020800	npm3	75	45.522	Kryptolebias_marmoratus
MGP_PahariEiJ_G0014510	Npm3	61	52.830	ENSLBEG00000015651	npm3	67	51.852	Labrus_bergylta
MGP_PahariEiJ_G0014510	Npm3	95	44.848	ENSLOCG00000000705	-	97	48.447	Lepisosteus_oculatus
MGP_PahariEiJ_G0014510	Npm3	98	78.947	ENSLAFG00000023022	NPM3	95	82.036	Loxodonta_africana
MGP_PahariEiJ_G0014510	Npm3	94	84.524	ENSMFAG00000041878	NPM3	100	84.831	Macaca_fascicularis
MGP_PahariEiJ_G0014510	Npm3	94	83.929	ENSMMUG00000015774	NPM3	100	84.270	Macaca_mulatta
MGP_PahariEiJ_G0014510	Npm3	94	84.524	ENSMNEG00000039999	NPM3	100	84.831	Macaca_nemestrina
MGP_PahariEiJ_G0014510	Npm3	94	84.524	ENSMLEG00000038129	NPM3	100	84.831	Mandrillus_leucophaeus
MGP_PahariEiJ_G0014510	Npm3	63	50.909	ENSMAMG00000002698	npm3	69	50.000	Mastacembelus_armatus
MGP_PahariEiJ_G0014510	Npm3	61	51.887	ENSMZEG00005003091	npm3	89	48.252	Maylandia_zebra
MGP_PahariEiJ_G0014510	Npm3	94	89.091	ENSMAUG00000015218	Npm3	94	92.727	Mesocricetus_auratus
MGP_PahariEiJ_G0014510	Npm3	100	82.486	ENSMICG00000044119	NPM3	100	83.051	Microcebus_murinus
MGP_PahariEiJ_G0014510	Npm3	94	89.571	ENSMOCG00000013601	Npm3	99	89.017	Microtus_ochrogaster
MGP_PahariEiJ_G0014510	Npm3	61	51.887	ENSMMOG00000010681	npm3	67	50.926	Mola_mola
MGP_PahariEiJ_G0014510	Npm3	98	67.816	ENSMODG00000011689	NPM3	94	68.072	Monodelphis_domestica
MGP_PahariEiJ_G0014510	Npm3	67	46.218	ENSMALG00000016787	npm3	70	46.218	Monopterus_albus
MGP_PahariEiJ_G0014510	Npm3	100	97.143	MGP_CAROLIEiJ_G0023020	Npm3	100	97.143	Mus_caroli
MGP_PahariEiJ_G0014510	Npm3	100	97.714	ENSMUSG00000056209	Npm3	100	97.714	Mus_musculus
MGP_PahariEiJ_G0014510	Npm3	100	97.714	MGP_SPRETEiJ_G0023941	Npm3	100	97.714	Mus_spretus
MGP_PahariEiJ_G0014510	Npm3	94	81.437	ENSMPUG00000016894	NPM3	100	83.051	Mustela_putorius_furo
MGP_PahariEiJ_G0014510	Npm3	97	81.395	ENSMLUG00000004961	NPM3	92	82.822	Myotis_lucifugus
MGP_PahariEiJ_G0014510	Npm3	99	79.769	ENSNGAG00000000155	-	99	78.613	Nannospalax_galili
MGP_PahariEiJ_G0014510	Npm3	99	85.143	ENSNGAG00000022833	-	99	85.714	Nannospalax_galili
MGP_PahariEiJ_G0014510	Npm3	56	48.485	ENSNBRG00000009627	npm3	71	48.485	Neolamprologus_brichardi
MGP_PahariEiJ_G0014510	Npm3	94	84.524	ENSNLEG00000029281	-	100	84.831	Nomascus_leucogenys
MGP_PahariEiJ_G0014510	Npm3	94	82.143	ENSNLEG00000018637	-	100	82.584	Nomascus_leucogenys
MGP_PahariEiJ_G0014510	Npm3	79	75.912	ENSMEUG00000003465	-	93	77.519	Notamacropus_eugenii
MGP_PahariEiJ_G0014510	Npm3	57	66.667	ENSMEUG00000004931	-	100	66.667	Notamacropus_eugenii
MGP_PahariEiJ_G0014510	Npm3	57	70.707	ENSMEUG00000002619	-	100	70.707	Notamacropus_eugenii
MGP_PahariEiJ_G0014510	Npm3	93	80.000	ENSOPRG00000009229	NPM3	99	80.682	Ochotona_princeps
MGP_PahariEiJ_G0014510	Npm3	97	79.882	ENSODEG00000006704	NPM3	96	79.268	Octodon_degus
MGP_PahariEiJ_G0014510	Npm3	79	49.296	ENSONIG00000009513	npm3	88	47.552	Oreochromis_niloticus
MGP_PahariEiJ_G0014510	Npm3	94	86.145	ENSOCUG00000016819	NPM3	94	85.542	Oryctolagus_cuniculus
MGP_PahariEiJ_G0014510	Npm3	61	51.887	ENSORLG00000008492	npm3	89	46.099	Oryzias_latipes
MGP_PahariEiJ_G0014510	Npm3	61	51.887	ENSORLG00020002450	npm3	89	46.099	Oryzias_latipes_hni
MGP_PahariEiJ_G0014510	Npm3	64	50.000	ENSORLG00015006856	npm3	70	50.000	Oryzias_latipes_hsok
MGP_PahariEiJ_G0014510	Npm3	66	48.246	ENSOMEG00000002666	npm3	74	46.667	Oryzias_melastigma
MGP_PahariEiJ_G0014510	Npm3	100	83.051	ENSOGAG00000010001	NPM3	94	83.234	Otolemur_garnettii
MGP_PahariEiJ_G0014510	Npm3	97	84.211	ENSOARG00000016916	NPM3	91	85.714	Ovis_aries
MGP_PahariEiJ_G0014510	Npm3	94	83.333	ENSPPAG00000040517	NPM3	100	84.831	Pan_paniscus
MGP_PahariEiJ_G0014510	Npm3	100	84.091	ENSPPRG00000012611	-	100	85.227	Panthera_pardus
MGP_PahariEiJ_G0014510	Npm3	100	84.659	ENSPTIG00000005390	NPM3	100	85.795	Panthera_tigris_altaica
MGP_PahariEiJ_G0014510	Npm3	94	83.333	ENSPTRG00000002875	NPM3	100	84.831	Pan_troglodytes
MGP_PahariEiJ_G0014510	Npm3	94	84.524	ENSPANG00000021046	NPM3	100	84.831	Papio_anubis
MGP_PahariEiJ_G0014510	Npm3	61	41.509	ENSPKIG00000007609	npm3	57	41.509	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0014510	Npm3	61	55.140	ENSPMGG00000020204	npm3	70	52.632	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0014510	Npm3	94	88.554	ENSPEMG00000007731	Npm3	100	90.341	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0014510	Npm3	76	46.970	ENSPFOG00000014692	npm3	69	51.786	Poecilia_formosa
MGP_PahariEiJ_G0014510	Npm3	76	46.970	ENSPLAG00000009956	npm3	69	51.786	Poecilia_latipinna
MGP_PahariEiJ_G0014510	Npm3	58	52.475	ENSPMEG00000011795	npm3	92	48.175	Poecilia_mexicana
MGP_PahariEiJ_G0014510	Npm3	76	46.212	ENSPREG00000020765	npm3	99	42.857	Poecilia_reticulata
MGP_PahariEiJ_G0014510	Npm3	94	83.529	ENSPPYG00000002589	NPM3	87	83.889	Pongo_abelii
MGP_PahariEiJ_G0014510	Npm3	100	82.486	ENSPCOG00000014704	NPM3	94	83.234	Propithecus_coquereli
MGP_PahariEiJ_G0014510	Npm3	94	80.240	ENSPVAG00000004038	NPM3	100	81.921	Pteropus_vampyrus
MGP_PahariEiJ_G0014510	Npm3	80	48.252	ENSPNYG00000009300	npm3	89	48.252	Pundamilia_nyererei
MGP_PahariEiJ_G0014510	Npm3	64	54.054	ENSPNAG00000014779	npm3	87	50.725	Pygocentrus_nattereri
MGP_PahariEiJ_G0014510	Npm3	100	95.402	ENSRNOG00000017622	Npm3	100	95.402	Rattus_norvegicus
MGP_PahariEiJ_G0014510	Npm3	100	82.486	ENSRBIG00000039086	-	100	84.181	Rhinopithecus_bieti
MGP_PahariEiJ_G0014510	Npm3	80	76.923	ENSRBIG00000042048	-	90	79.021	Rhinopithecus_bieti
MGP_PahariEiJ_G0014510	Npm3	100	82.486	ENSRROG00000029912	NPM3	100	84.181	Rhinopithecus_roxellana
MGP_PahariEiJ_G0014510	Npm3	95	83.529	ENSSBOG00000027661	NPM3	100	82.941	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0014510	Npm3	92	66.463	ENSSHAG00000008567	NPM3	94	65.868	Sarcophilus_harrisii
MGP_PahariEiJ_G0014510	Npm3	61	49.057	ENSSFOG00015013651	npm3	70	47.321	Scleropages_formosus
MGP_PahariEiJ_G0014510	Npm3	61	50.943	ENSSMAG00000003907	npm3	68	50.000	Scophthalmus_maximus
MGP_PahariEiJ_G0014510	Npm3	61	54.717	ENSSDUG00000022843	npm3	67	53.704	Seriola_dumerili
MGP_PahariEiJ_G0014510	Npm3	61	54.717	ENSSLDG00000002811	npm3	67	53.704	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0014510	Npm3	68	68.033	ENSSPUG00000011875	NPM3	76	68.033	Sphenodon_punctatus
MGP_PahariEiJ_G0014510	Npm3	64	50.000	ENSSPAG00000002553	npm3	73	48.305	Stegastes_partitus
MGP_PahariEiJ_G0014510	Npm3	99	79.429	ENSSSCG00000010568	NPM3	94	81.212	Sus_scrofa
MGP_PahariEiJ_G0014510	Npm3	64	65.766	ENSTGUG00000009948	NPM3	84	65.766	Taeniopygia_guttata
MGP_PahariEiJ_G0014510	Npm3	83	45.517	ENSTRUG00000011661	npm3	92	45.517	Takifugu_rubripes
MGP_PahariEiJ_G0014510	Npm3	67	49.573	ENSTNIG00000016518	npm3	67	49.573	Tetraodon_nigroviridis
MGP_PahariEiJ_G0014510	Npm3	94	83.234	ENSUAMG00000024072	NPM3	73	84.746	Ursus_americanus
MGP_PahariEiJ_G0014510	Npm3	94	83.234	ENSUMAG00000023016	NPM3	73	84.746	Ursus_maritimus
MGP_PahariEiJ_G0014510	Npm3	100	84.659	ENSVPAG00000003120	NPM3	100	86.364	Vicugna_pacos
MGP_PahariEiJ_G0014510	Npm3	94	84.848	ENSVVUG00000000945	NPM3	87	87.429	Vulpes_vulpes
MGP_PahariEiJ_G0014510	Npm3	68	56.780	ENSXETG00000014472	npm3	68	56.780	Xenopus_tropicalis
MGP_PahariEiJ_G0014510	Npm3	79	45.985	ENSXCOG00000012121	npm3	77	46.667	Xiphophorus_couchianus
MGP_PahariEiJ_G0014510	Npm3	79	45.985	ENSXMAG00000013473	npm3	67	51.786	Xiphophorus_maculatus