EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0014517 (Gene tree)
Gene ID: 110327559
Gene Symbol: Nolc1
Alias: 3230402K17Rik|NOPP140|P130
Full Name: nucleolar and coiled-body phosphoprotein 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 10069 bases
Position: chr1:157414489-157424557
Accession: 110327559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0021972	SRP40_C	PF05022.12	4.5e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0021972	-	3557	-	MGP_PahariEiJ_P0021972	696 (aa)	XP_021062279	UPI000A30DCF9
MGP_PahariEiJ_T0021973	-	2088	-	MGP_PahariEiJ_P0021973	695 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0014517's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0014517's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0014517	Nolc1	100	68.118	ENSG00000166197	NOLC1	98	89.744	Homo_sapiens
MGP_PahariEiJ_G0014517	Nolc1	100	65.750	ENSAMEG00000017687	NOLC1	100	68.603	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0014517	Nolc1	100	63.815	ENSANAG00000026475	-	100	64.846	Aotus_nancymaae
MGP_PahariEiJ_G0014517	Nolc1	100	67.087	ENSBTAG00000007435	NOLC1	100	67.787	Bos_taurus
MGP_PahariEiJ_G0014517	Nolc1	100	67.131	ENSCJAG00000017832	NOLC1	100	68.828	Callithrix_jacchus
MGP_PahariEiJ_G0014517	Nolc1	100	69.004	ENSCAFG00000010062	NOLC1	100	69.565	Canis_familiaris
MGP_PahariEiJ_G0014517	Nolc1	100	66.994	ENSCAFG00020010146	NOLC1	100	68.724	Canis_lupus_dingo
MGP_PahariEiJ_G0014517	Nolc1	94	67.404	ENSTSYG00000011322	NOLC1	100	66.127	Carlito_syrichta
MGP_PahariEiJ_G0014517	Nolc1	99	63.854	ENSCPOG00000004504	NOLC1	95	65.682	Cavia_porcellus
MGP_PahariEiJ_G0014517	Nolc1	100	68.539	ENSCCAG00000031293	NOLC1	100	70.769	Cebus_capucinus
MGP_PahariEiJ_G0014517	Nolc1	100	68.724	ENSCATG00000020949	NOLC1	100	72.409	Cercocebus_atys
MGP_PahariEiJ_G0014517	Nolc1	100	68.370	ENSCSAG00000005465	NOLC1	100	68.370	Chlorocebus_sabaeus
MGP_PahariEiJ_G0014517	Nolc1	100	67.036	ENSCANG00000032550	NOLC1	100	69.571	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0014517	Nolc1	100	76.462	ENSCGRG00001009806	Nolc1	100	73.571	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0014517	Nolc1	100	76.462	ENSCGRG00000005530	Nolc1	100	73.571	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0014517	Nolc1	100	90.909	ENSDNOG00000025256	NOLC1	62	90.164	Dasypus_novemcinctus
MGP_PahariEiJ_G0014517	Nolc1	100	70.863	ENSDORG00000001056	Nolc1	100	71.146	Dipodomys_ordii
MGP_PahariEiJ_G0014517	Nolc1	75	77.515	ENSETEG00000019260	NOLC1	57	61.538	Echinops_telfairi
MGP_PahariEiJ_G0014517	Nolc1	81	91.892	ENSEASG00005007519	NOLC1	100	72.045	Equus_asinus_asinus
MGP_PahariEiJ_G0014517	Nolc1	100	70.000	ENSECAG00000024700	NOLC1	100	72.500	Equus_caballus
MGP_PahariEiJ_G0014517	Nolc1	81	72.500	ENSEEUG00000003212	NOLC1	85	74.603	Erinaceus_europaeus
MGP_PahariEiJ_G0014517	Nolc1	66	69.528	ENSFCAG00000001239	NOLC1	100	71.093	Felis_catus
MGP_PahariEiJ_G0014517	Nolc1	100	64.846	ENSFDAG00000006050	NOLC1	100	66.011	Fukomys_damarensis
MGP_PahariEiJ_G0014517	Nolc1	100	66.898	ENSGGOG00000002158	NOLC1	100	68.975	Gorilla_gorilla
MGP_PahariEiJ_G0014517	Nolc1	100	68.112	ENSHGLG00000003156	NOLC1	100	64.797	Heterocephalus_glaber_female
MGP_PahariEiJ_G0014517	Nolc1	100	68.347	ENSHGLG00100008172	NOLC1	100	64.888	Heterocephalus_glaber_male
MGP_PahariEiJ_G0014517	Nolc1	100	72.129	ENSSTOG00000002168	NOLC1	100	69.748	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0014517	Nolc1	100	68.289	ENSJJAG00000021131	Nolc1	73	71.542	Jaculus_jaculus
MGP_PahariEiJ_G0014517	Nolc1	100	69.650	ENSLAFG00000014245	NOLC1	100	68.583	Loxodonta_africana
MGP_PahariEiJ_G0014517	Nolc1	100	68.022	ENSMFAG00000044654	NOLC1	100	71.429	Macaca_fascicularis
MGP_PahariEiJ_G0014517	Nolc1	100	68.820	ENSMMUG00000001183	NOLC1	100	70.968	Macaca_mulatta
MGP_PahariEiJ_G0014517	Nolc1	100	67.220	ENSMLEG00000040773	NOLC1	100	70.678	Mandrillus_leucophaeus
MGP_PahariEiJ_G0014517	Nolc1	100	71.093	ENSMICG00000011811	NOLC1	100	72.376	Microcebus_murinus
MGP_PahariEiJ_G0014517	Nolc1	100	76.034	ENSMOCG00000015232	Nolc1	100	80.000	Microtus_ochrogaster
MGP_PahariEiJ_G0014517	Nolc1	100	83.731	MGP_CAROLIEiJ_G0023027	Nolc1	100	84.572	Mus_caroli
MGP_PahariEiJ_G0014517	Nolc1	100	84.225	ENSMUSG00000015176	Nolc1	100	84.225	Mus_musculus
MGP_PahariEiJ_G0014517	Nolc1	100	83.498	MGP_SPRETEiJ_G0023948	Nolc1	100	83.639	Mus_spretus
MGP_PahariEiJ_G0014517	Nolc1	100	68.044	ENSMPUG00000016887	NOLC1	100	69.444	Mustela_putorius_furo
MGP_PahariEiJ_G0014517	Nolc1	100	69.018	ENSMLUG00000001726	NOLC1	100	71.250	Myotis_lucifugus
MGP_PahariEiJ_G0014517	Nolc1	100	73.492	ENSNGAG00000024139	Nolc1	100	74.574	Nannospalax_galili
MGP_PahariEiJ_G0014517	Nolc1	100	67.452	ENSNLEG00000015012	NOLC1	100	69.529	Nomascus_leucogenys
MGP_PahariEiJ_G0014517	Nolc1	91	72.065	ENSOPRG00000009381	NOLC1	100	66.387	Ochotona_princeps
MGP_PahariEiJ_G0014517	Nolc1	100	63.188	ENSODEG00000006304	NOLC1	100	61.613	Octodon_degus
MGP_PahariEiJ_G0014517	Nolc1	100	73.109	ENSOCUG00000000516	-	100	73.147	Oryctolagus_cuniculus
MGP_PahariEiJ_G0014517	Nolc1	100	67.511	ENSOGAG00000016359	NOLC1	100	67.229	Otolemur_garnettii
MGP_PahariEiJ_G0014517	Nolc1	100	66.899	ENSOARG00000017556	NOLC1	100	69.510	Ovis_aries
MGP_PahariEiJ_G0014517	Nolc1	100	70.084	ENSPPAG00000038082	NOLC1	100	70.506	Pan_paniscus
MGP_PahariEiJ_G0014517	Nolc1	100	68.100	ENSPPRG00000003072	NOLC1	100	71.330	Panthera_pardus
MGP_PahariEiJ_G0014517	Nolc1	66	67.447	ENSPTIG00000014862	NOLC1	100	69.136	Panthera_tigris_altaica
MGP_PahariEiJ_G0014517	Nolc1	100	69.242	ENSPTRG00000023882	NOLC1	100	71.208	Pan_troglodytes
MGP_PahariEiJ_G0014517	Nolc1	100	68.443	ENSPANG00000021014	NOLC1	100	70.308	Papio_anubis
MGP_PahariEiJ_G0014517	Nolc1	100	67.087	ENSPPYG00000002595	NOLC1	100	70.028	Pongo_abelii
MGP_PahariEiJ_G0014517	Nolc1	70	92.308	ENSPCAG00000008388	NOLC1	85	92.308	Procavia_capensis
MGP_PahariEiJ_G0014517	Nolc1	100	69.371	ENSPCOG00000019070	-	100	72.067	Propithecus_coquereli
MGP_PahariEiJ_G0014517	Nolc1	100	69.038	ENSPVAG00000004050	NOLC1	100	68.340	Pteropus_vampyrus
MGP_PahariEiJ_G0014517	Nolc1	68	84.440	ENSRNOG00000018704	Nolc1	100	82.419	Rattus_norvegicus
MGP_PahariEiJ_G0014517	Nolc1	100	63.284	ENSRBIG00000032216	NOLC1	100	67.333	Rhinopithecus_bieti
MGP_PahariEiJ_G0014517	Nolc1	100	67.367	ENSRROG00000038056	NOLC1	100	71.329	Rhinopithecus_roxellana
MGP_PahariEiJ_G0014517	Nolc1	100	69.553	ENSSBOG00000031205	NOLC1	100	70.112	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0014517	Nolc1	62	77.686	ENSSHAG00000002222	-	100	52.853	Sarcophilus_harrisii
MGP_PahariEiJ_G0014517	Nolc1	100	67.080	ENSSARG00000004111	NOLC1	100	68.000	Sorex_araneus
MGP_PahariEiJ_G0014517	Nolc1	100	69.371	ENSSSCG00000010576	NOLC1	100	71.888	Sus_scrofa
MGP_PahariEiJ_G0014517	Nolc1	100	67.080	ENSTTRG00000014974	NOLC1	100	69.284	Tursiops_truncatus
MGP_PahariEiJ_G0014517	Nolc1	100	68.283	ENSUAMG00000028059	NOLC1	100	71.089	Ursus_americanus
MGP_PahariEiJ_G0014517	Nolc1	100	68.985	ENSUMAG00000023063	NOLC1	100	70.827	Ursus_maritimus
MGP_PahariEiJ_G0014517	Nolc1	100	65.406	ENSVVUG00000002661	NOLC1	100	66.059	Vulpes_vulpes