EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0014540 (Gene tree)
Gene ID: 110323700
Gene Symbol: Pdcd11
Alias: 1110021I22Rik|ALG-4
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 48127 bases
Position: chr1:158440204-158488330
Accession: 110323700
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0022032	Suf	PF05843.14	2.9e-09	1	1
MGP_PahariEiJ_P0022032	S1	PF00575.23	1.1e-65	1	4
MGP_PahariEiJ_P0022032	S1	PF00575.23	1.1e-65	2	4
MGP_PahariEiJ_P0022032	S1	PF00575.23	1.1e-65	3	4
MGP_PahariEiJ_P0022032	S1	PF00575.23	1.1e-65	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0022032	-	6062	XM_021201054	MGP_PahariEiJ_P0022032	1868 (aa)	XP_021056713	-

Gene Model

Click here to download MGP_PahariEiJ_G0014540's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0014540's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0014540	Pdcd11	100	80.649	ENSG00000148843	PDCD11	100	80.595	Homo_sapiens
MGP_PahariEiJ_G0014540	Pdcd11	99	43.720	ENSAPOG00000015629	pdcd11	99	43.737	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0014540	Pdcd11	99	79.206	ENSAMEG00000017935	PDCD11	99	79.237	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0014540	Pdcd11	99	43.879	ENSAOCG00000015287	pdcd11	99	44.008	Amphiprion_ocellaris
MGP_PahariEiJ_G0014540	Pdcd11	53	43.000	ENSAPEG00000020240	pdcd11	96	43.029	Amphiprion_percula
MGP_PahariEiJ_G0014540	Pdcd11	99	43.351	ENSATEG00000021043	pdcd11	99	43.677	Anabas_testudineus
MGP_PahariEiJ_G0014540	Pdcd11	99	54.425	ENSAPLG00000010301	PDCD11	99	54.478	Anas_platyrhynchos
MGP_PahariEiJ_G0014540	Pdcd11	99	54.196	ENSACAG00000004796	PDCD11	99	54.089	Anolis_carolinensis
MGP_PahariEiJ_G0014540	Pdcd11	99	80.213	ENSANAG00000034576	PDCD11	99	80.160	Aotus_nancymaae
MGP_PahariEiJ_G0014540	Pdcd11	90	60.472	ENSACLG00000018236	pdcd11	99	64.685	Astatotilapia_calliptera
MGP_PahariEiJ_G0014540	Pdcd11	99	40.681	ENSAMXG00000005458	pdcd11	100	40.538	Astyanax_mexicanus
MGP_PahariEiJ_G0014540	Pdcd11	100	77.147	ENSBTAG00000009715	PDCD11	100	77.200	Bos_taurus
MGP_PahariEiJ_G0014540	Pdcd11	99	79.531	ENSCJAG00000018257	PDCD11	99	79.158	Callithrix_jacchus
MGP_PahariEiJ_G0014540	Pdcd11	99	78.905	ENSCAFG00000010411	PDCD11	100	78.905	Canis_familiaris
MGP_PahariEiJ_G0014540	Pdcd11	100	78.727	ENSCAFG00020010369	PDCD11	100	78.942	Canis_lupus_dingo
MGP_PahariEiJ_G0014540	Pdcd11	99	76.870	ENSCHIG00000025218	PDCD11	100	77.029	Capra_hircus
MGP_PahariEiJ_G0014540	Pdcd11	98	73.173	ENSTSYG00000033423	PDCD11	99	73.064	Carlito_syrichta
MGP_PahariEiJ_G0014540	Pdcd11	91	68.282	ENSCAPG00000005386	PDCD11	99	68.282	Cavia_aperea
MGP_PahariEiJ_G0014540	Pdcd11	100	76.845	ENSCPOG00000010957	PDCD11	99	78.008	Cavia_porcellus
MGP_PahariEiJ_G0014540	Pdcd11	99	79.851	ENSCCAG00000018950	PDCD11	99	79.424	Cebus_capucinus
MGP_PahariEiJ_G0014540	Pdcd11	100	81.094	ENSCATG00000044331	PDCD11	100	80.669	Cercocebus_atys
MGP_PahariEiJ_G0014540	Pdcd11	100	78.009	ENSCLAG00000001029	PDCD11	100	77.583	Chinchilla_lanigera
MGP_PahariEiJ_G0014540	Pdcd11	100	80.968	ENSCSAG00000005346	PDCD11	100	80.542	Chlorocebus_sabaeus
MGP_PahariEiJ_G0014540	Pdcd11	80	95.349	ENSCHOG00000004796	PDCD11	90	95.349	Choloepus_hoffmanni
MGP_PahariEiJ_G0014540	Pdcd11	91	73.011	ENSCPBG00000024487	PDCD11	99	73.011	Chrysemys_picta_bellii
MGP_PahariEiJ_G0014540	Pdcd11	96	35.784	ENSCING00000002715	-	87	45.247	Ciona_intestinalis
MGP_PahariEiJ_G0014540	Pdcd11	100	80.755	ENSCANG00000043300	PDCD11	100	80.436	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0014540	Pdcd11	100	86.080	ENSCGRG00001006458	Pdcd11	100	85.707	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0014540	Pdcd11	100	85.874	ENSCGRG00000003583	Pdcd11	100	85.501	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0014540	Pdcd11	97	43.021	ENSCSEG00000010739	pdcd11	99	43.388	Cynoglossus_semilaevis
MGP_PahariEiJ_G0014540	Pdcd11	89	62.391	ENSCVAG00000018903	pdcd11	99	48.212	Cyprinodon_variegatus
MGP_PahariEiJ_G0014540	Pdcd11	99	42.796	ENSDARG00000052480	pdcd11	99	42.539	Danio_rerio
MGP_PahariEiJ_G0014540	Pdcd11	100	76.948	ENSDNOG00000013838	PDCD11	100	76.948	Dasypus_novemcinctus
MGP_PahariEiJ_G0014540	Pdcd11	100	80.096	ENSDORG00000010420	Pdcd11	100	79.776	Dipodomys_ordii
MGP_PahariEiJ_G0014540	Pdcd11	60	39.812	FBgn0039182	CG5728	74	40.636	Drosophila_melanogaster
MGP_PahariEiJ_G0014540	Pdcd11	95	67.490	ENSETEG00000000813	PDCD11	100	67.434	Echinops_telfairi
MGP_PahariEiJ_G0014540	Pdcd11	57	52.508	ENSEBUG00000002358	-	92	53.633	Eptatretus_burgeri
MGP_PahariEiJ_G0014540	Pdcd11	96	80.411	ENSEASG00005015159	PDCD11	100	80.411	Equus_asinus_asinus
MGP_PahariEiJ_G0014540	Pdcd11	100	80.414	ENSECAG00000020507	PDCD11	100	80.361	Equus_caballus
MGP_PahariEiJ_G0014540	Pdcd11	98	84.000	ENSEEUG00000009245	PDCD11	91	84.000	Erinaceus_europaeus
MGP_PahariEiJ_G0014540	Pdcd11	99	44.203	ENSELUG00000004211	pdcd11	99	43.830	Esox_lucius
MGP_PahariEiJ_G0014540	Pdcd11	99	78.992	ENSFCAG00000002384	PDCD11	99	79.204	Felis_catus
MGP_PahariEiJ_G0014540	Pdcd11	99	55.200	ENSFALG00000008775	PDCD11	99	55.093	Ficedula_albicollis
MGP_PahariEiJ_G0014540	Pdcd11	100	78.120	ENSFDAG00000009532	PDCD11	100	78.067	Fukomys_damarensis
MGP_PahariEiJ_G0014540	Pdcd11	94	66.892	ENSFHEG00000022997	pdcd11	99	67.958	Fundulus_heteroclitus
MGP_PahariEiJ_G0014540	Pdcd11	92	45.031	ENSGMOG00000004186	pdcd11	94	45.031	Gadus_morhua
MGP_PahariEiJ_G0014540	Pdcd11	76	53.516	ENSGALG00000008265	PDCD11	99	52.461	Gallus_gallus
MGP_PahariEiJ_G0014540	Pdcd11	93	49.278	ENSGAFG00000012806	pdcd11	99	49.189	Gambusia_affinis
MGP_PahariEiJ_G0014540	Pdcd11	99	43.159	ENSGACG00000018233	pdcd11	97	57.963	Gasterosteus_aculeatus
MGP_PahariEiJ_G0014540	Pdcd11	96	58.557	ENSGAGG00000024314	PDCD11	99	58.079	Gopherus_agassizii
MGP_PahariEiJ_G0014540	Pdcd11	100	80.542	ENSGGOG00000011621	PDCD11	100	80.117	Gorilla_gorilla
MGP_PahariEiJ_G0014540	Pdcd11	100	77.476	ENSHGLG00000001462	PDCD11	100	77.583	Heterocephalus_glaber_female
MGP_PahariEiJ_G0014540	Pdcd11	100	76.784	ENSHGLG00100018779	PDCD11	100	76.890	Heterocephalus_glaber_male
MGP_PahariEiJ_G0014540	Pdcd11	99	42.265	ENSHCOG00000016006	pdcd11	99	42.485	Hippocampus_comes
MGP_PahariEiJ_G0014540	Pdcd11	62	39.727	ENSIPUG00000015102	pdcd11	99	41.586	Ictalurus_punctatus
MGP_PahariEiJ_G0014540	Pdcd11	100	80.298	ENSSTOG00000014553	PDCD11	100	79.872	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0014540	Pdcd11	100	81.277	ENSJJAG00000015523	Pdcd11	100	81.383	Jaculus_jaculus
MGP_PahariEiJ_G0014540	Pdcd11	99	47.951	ENSLOCG00000011818	pdcd11	99	47.826	Lepisosteus_oculatus
MGP_PahariEiJ_G0014540	Pdcd11	100	78.182	ENSLAFG00000008398	PDCD11	100	77.968	Loxodonta_africana
MGP_PahariEiJ_G0014540	Pdcd11	100	81.074	ENSMFAG00000044058	PDCD11	100	80.702	Macaca_fascicularis
MGP_PahariEiJ_G0014540	Pdcd11	100	81.074	ENSMMUG00000007058	PDCD11	100	80.702	Macaca_mulatta
MGP_PahariEiJ_G0014540	Pdcd11	100	81.127	ENSMNEG00000040726	PDCD11	99	80.755	Macaca_nemestrina
MGP_PahariEiJ_G0014540	Pdcd11	100	79.957	ENSMLEG00000040978	PDCD11	100	79.532	Mandrillus_leucophaeus
MGP_PahariEiJ_G0014540	Pdcd11	99	42.857	ENSMAMG00000009572	pdcd11	99	43.123	Mastacembelus_armatus
MGP_PahariEiJ_G0014540	Pdcd11	99	55.138	ENSMGAG00000010482	PDCD11	99	54.722	Meleagris_gallopavo
MGP_PahariEiJ_G0014540	Pdcd11	89	88.612	ENSMAUG00000014924	Pdcd11	97	88.503	Mesocricetus_auratus
MGP_PahariEiJ_G0014540	Pdcd11	100	79.437	ENSMICG00000012421	PDCD11	100	79.012	Microcebus_murinus
MGP_PahariEiJ_G0014540	Pdcd11	100	85.510	ENSMOCG00000021792	Pdcd11	100	85.563	Microtus_ochrogaster
MGP_PahariEiJ_G0014540	Pdcd11	99	39.621	ENSMMOG00000007572	pdcd11	97	43.042	Mola_mola
MGP_PahariEiJ_G0014540	Pdcd11	99	59.831	ENSMODG00000011077	PDCD11	99	60.032	Monodelphis_domestica
MGP_PahariEiJ_G0014540	Pdcd11	99	38.347	ENSMALG00000003859	pdcd11	97	43.627	Monopterus_albus
MGP_PahariEiJ_G0014540	Pdcd11	100	94.599	MGP_CAROLIEiJ_G0023050	Pdcd11	100	94.118	Mus_caroli
MGP_PahariEiJ_G0014540	Pdcd11	100	94.071	ENSMUSG00000025047	Pdcd11	100	93.590	Mus_musculus
MGP_PahariEiJ_G0014540	Pdcd11	100	94.492	MGP_SPRETEiJ_G0023971	Pdcd11	100	94.011	Mus_spretus
MGP_PahariEiJ_G0014540	Pdcd11	99	78.268	ENSMPUG00000016829	PDCD11	100	78.905	Mustela_putorius_furo
MGP_PahariEiJ_G0014540	Pdcd11	100	79.926	ENSMLUG00000004997	PDCD11	100	79.820	Myotis_lucifugus
MGP_PahariEiJ_G0014540	Pdcd11	100	83.626	ENSNGAG00000018143	Pdcd11	100	83.892	Nannospalax_galili
MGP_PahariEiJ_G0014540	Pdcd11	85	56.418	ENSNBRG00000021596	pdcd11	99	54.494	Neolamprologus_brichardi
MGP_PahariEiJ_G0014540	Pdcd11	100	77.831	ENSNLEG00000026700	PDCD11	100	77.406	Nomascus_leucogenys
MGP_PahariEiJ_G0014540	Pdcd11	70	79.476	ENSMEUG00000013719	-	71	79.476	Notamacropus_eugenii
MGP_PahariEiJ_G0014540	Pdcd11	100	74.721	ENSOPRG00000010593	PDCD11	100	74.668	Ochotona_princeps
MGP_PahariEiJ_G0014540	Pdcd11	100	75.951	ENSODEG00000008079	PDCD11	99	75.846	Octodon_degus
MGP_PahariEiJ_G0014540	Pdcd11	99	43.989	ENSONIG00000018835	pdcd11	99	44.302	Oreochromis_niloticus
MGP_PahariEiJ_G0014540	Pdcd11	99	59.127	ENSOANG00000001636	-	99	59.009	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0014540	Pdcd11	100	79.268	ENSOCUG00000006312	PDCD11	100	79.268	Oryctolagus_cuniculus
MGP_PahariEiJ_G0014540	Pdcd11	99	42.630	ENSORLG00020003642	pdcd11	99	42.501	Oryzias_latipes_hni
MGP_PahariEiJ_G0014540	Pdcd11	99	42.606	ENSORLG00015001618	pdcd11	99	42.562	Oryzias_latipes_hsok
MGP_PahariEiJ_G0014540	Pdcd11	73	42.984	ENSOMEG00000010904	pdcd11	98	42.464	Oryzias_melastigma
MGP_PahariEiJ_G0014540	Pdcd11	100	78.238	ENSOGAG00000008683	PDCD11	100	77.813	Otolemur_garnettii
MGP_PahariEiJ_G0014540	Pdcd11	99	76.817	ENSOARG00000003719	PDCD11	100	76.976	Ovis_aries
MGP_PahariEiJ_G0014540	Pdcd11	100	77.801	ENSPPAG00000024593	PDCD11	100	78.125	Pan_paniscus
MGP_PahariEiJ_G0014540	Pdcd11	99	78.886	ENSPPRG00000015133	PDCD11	99	79.151	Panthera_pardus
MGP_PahariEiJ_G0014540	Pdcd11	99	78.886	ENSPTIG00000011433	PDCD11	99	79.151	Panthera_tigris_altaica
MGP_PahariEiJ_G0014540	Pdcd11	100	80.489	ENSPTRG00000002911	PDCD11	100	80.064	Pan_troglodytes
MGP_PahariEiJ_G0014540	Pdcd11	100	81.021	ENSPANG00000020959	PDCD11	100	80.595	Papio_anubis
MGP_PahariEiJ_G0014540	Pdcd11	99	45.445	ENSPKIG00000000973	pdcd11	99	45.178	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0014540	Pdcd11	77	55.915	ENSPSIG00000005102	PDCD11	95	55.640	Pelodiscus_sinensis
MGP_PahariEiJ_G0014540	Pdcd11	62	64.094	ENSPMGG00000007289	pdcd11	82	64.685	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0014540	Pdcd11	100	85.813	ENSPEMG00000010315	Pdcd11	100	86.185	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0014540	Pdcd11	99	41.724	ENSPMAG00000003098	pdcd11	99	41.618	Petromyzon_marinus
MGP_PahariEiJ_G0014540	Pdcd11	100	64.610	ENSPCIG00000001118	PDCD11	100	64.338	Phascolarctos_cinereus
MGP_PahariEiJ_G0014540	Pdcd11	99	43.573	ENSPFOG00000006012	pdcd11	99	43.663	Poecilia_formosa
MGP_PahariEiJ_G0014540	Pdcd11	96	48.368	ENSPLAG00000014494	pdcd11	99	48.886	Poecilia_latipinna
MGP_PahariEiJ_G0014540	Pdcd11	91	51.904	ENSPMEG00000018177	pdcd11	98	53.333	Poecilia_mexicana
MGP_PahariEiJ_G0014540	Pdcd11	99	43.684	ENSPREG00000000475	pdcd11	99	43.485	Poecilia_reticulata
MGP_PahariEiJ_G0014540	Pdcd11	100	78.944	ENSPPYG00000002621	PDCD11	100	78.373	Pongo_abelii
MGP_PahariEiJ_G0014540	Pdcd11	73	72.237	ENSPCAG00000011663	PDCD11	75	72.237	Procavia_capensis
MGP_PahariEiJ_G0014540	Pdcd11	92	75.683	ENSPCOG00000023327	PDCD11	99	74.772	Propithecus_coquereli
MGP_PahariEiJ_G0014540	Pdcd11	100	77.996	ENSPVAG00000004176	PDCD11	100	77.943	Pteropus_vampyrus
MGP_PahariEiJ_G0014540	Pdcd11	95	44.543	ENSPNAG00000017225	pdcd11	99	44.687	Pygocentrus_nattereri
MGP_PahariEiJ_G0014540	Pdcd11	100	90.479	ENSRNOG00000020304	Pdcd11	99	90.479	Rattus_norvegicus
MGP_PahariEiJ_G0014540	Pdcd11	100	80.861	ENSRBIG00000011889	PDCD11	100	80.542	Rhinopithecus_bieti
MGP_PahariEiJ_G0014540	Pdcd11	100	80.861	ENSRROG00000030483	PDCD11	100	80.542	Rhinopithecus_roxellana
MGP_PahariEiJ_G0014540	Pdcd11	86	47.253	YMR229C	-	91	47.253	Saccharomyces_cerevisiae
MGP_PahariEiJ_G0014540	Pdcd11	99	80.645	ENSSBOG00000030308	PDCD11	99	80.645	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0014540	Pdcd11	99	63.612	ENSSHAG00000018258	PDCD11	99	63.506	Sarcophilus_harrisii
MGP_PahariEiJ_G0014540	Pdcd11	99	45.945	ENSSFOG00015003881	pdcd11	99	45.672	Scleropages_formosus
MGP_PahariEiJ_G0014540	Pdcd11	99	43.813	ENSSMAG00000006612	pdcd11	99	43.996	Scophthalmus_maximus
MGP_PahariEiJ_G0014540	Pdcd11	95	47.377	ENSSDUG00000021302	pdcd11	99	48.228	Seriola_dumerili
MGP_PahariEiJ_G0014540	Pdcd11	80	89.286	ENSSARG00000002540	PDCD11	74	89.286	Sorex_araneus
MGP_PahariEiJ_G0014540	Pdcd11	97	42.592	ENSSPAG00000017558	pdcd11	100	42.388	Stegastes_partitus
MGP_PahariEiJ_G0014540	Pdcd11	100	77.766	ENSSSCG00000010599	PDCD11	100	77.962	Sus_scrofa
MGP_PahariEiJ_G0014540	Pdcd11	73	40.620	ENSTRUG00000014291	pdcd11	99	40.727	Takifugu_rubripes
MGP_PahariEiJ_G0014540	Pdcd11	99	43.243	ENSTNIG00000012085	pdcd11	99	43.107	Tetraodon_nigroviridis
MGP_PahariEiJ_G0014540	Pdcd11	100	74.655	ENSTBEG00000001893	PDCD11	100	74.708	Tupaia_belangeri
MGP_PahariEiJ_G0014540	Pdcd11	99	73.835	ENSTTRG00000003356	PDCD11	99	73.782	Tursiops_truncatus
MGP_PahariEiJ_G0014540	Pdcd11	99	79.226	ENSUAMG00000018015	PDCD11	100	79.173	Ursus_americanus
MGP_PahariEiJ_G0014540	Pdcd11	100	77.801	ENSUMAG00000023567	PDCD11	100	77.696	Ursus_maritimus
MGP_PahariEiJ_G0014540	Pdcd11	68	79.851	ENSVPAG00000007405	PDCD11	83	79.851	Vicugna_pacos
MGP_PahariEiJ_G0014540	Pdcd11	99	78.746	ENSVVUG00000004457	PDCD11	100	78.852	Vulpes_vulpes
MGP_PahariEiJ_G0014540	Pdcd11	99	48.795	ENSXETG00000009482	pdcd11	99	48.871	Xenopus_tropicalis
MGP_PahariEiJ_G0014540	Pdcd11	99	37.865	ENSXCOG00000012420	pdcd11	99	37.726	Xiphophorus_couchianus
MGP_PahariEiJ_G0014540	Pdcd11	99	43.594	ENSXMAG00000004638	pdcd11	99	43.654	Xiphophorus_maculatus