EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0014547 (Gene tree)
Gene ID: 110328065
Gene Symbol: Stn1
Alias: 0610009H20Rik|2310057J23Rik|Obfc1
Full Name: STN1%2C CST complex subunit
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 38136 bases
Position: chr1:158859765-158897900
Accession: 110328065
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0022044	tRNA_anti-codon	PF01336.25	6e-08	1	1
MGP_PahariEiJ_P0022042	tRNA_anti-codon	PF01336.25	7.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0022045	-	554	-	-	- (aa)	-	-
MGP_PahariEiJ_T0022044	-	1613	-	MGP_PahariEiJ_P0022044	334 (aa)	-	-
MGP_PahariEiJ_T0022047	-	1118	-	-	- (aa)	-	-
MGP_PahariEiJ_T0022046	-	522	-	-	- (aa)	-	-
MGP_PahariEiJ_T0022050	-	697	-	-	- (aa)	-	-
MGP_PahariEiJ_T0022043	-	808	-	-	- (aa)	-	-
MGP_PahariEiJ_T0022042	-	1994	XM_021207427	MGP_PahariEiJ_P0022042	378 (aa)	XP_021063086	UPI000A306882
MGP_PahariEiJ_T0022051	-	132	-	-	- (aa)	-	-
MGP_PahariEiJ_T0022049	-	439	-	-	- (aa)	-	-
MGP_PahariEiJ_T0022048	-	741	-	MGP_PahariEiJ_P0022048	99 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0014547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0014547's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0014547	Stn1	98	71.968	ENSG00000107960	STN1	100	71.968	Homo_sapiens
MGP_PahariEiJ_G0014547	Stn1	99	64.721	ENSAMEG00000017971	STN1	99	64.721	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0014547	Stn1	98	54.301	ENSAPLG00000006661	STN1	100	54.301	Anas_platyrhynchos
MGP_PahariEiJ_G0014547	Stn1	98	46.505	ENSACAG00000004954	STN1	100	46.505	Anolis_carolinensis
MGP_PahariEiJ_G0014547	Stn1	98	69.811	ENSANAG00000038147	STN1	100	69.811	Aotus_nancymaae
MGP_PahariEiJ_G0014547	Stn1	99	67.109	ENSBTAG00000015019	STN1	100	67.116	Bos_taurus
MGP_PahariEiJ_G0014547	Stn1	98	70.620	ENSCJAG00000040388	STN1	100	70.620	Callithrix_jacchus
MGP_PahariEiJ_G0014547	Stn1	98	66.310	ENSCAFG00000010483	STN1	100	66.310	Canis_familiaris
MGP_PahariEiJ_G0014547	Stn1	98	66.129	ENSCAFG00020010650	STN1	100	66.129	Canis_lupus_dingo
MGP_PahariEiJ_G0014547	Stn1	99	59.947	ENSCHIG00000003253	-	100	60.477	Capra_hircus
MGP_PahariEiJ_G0014547	Stn1	98	66.577	ENSCHIG00000019425	-	100	67.116	Capra_hircus
MGP_PahariEiJ_G0014547	Stn1	86	68.000	ENSCAPG00000016278	STN1	99	68.000	Cavia_aperea
MGP_PahariEiJ_G0014547	Stn1	100	67.989	ENSCPOG00000006273	STN1	100	67.989	Cavia_porcellus
MGP_PahariEiJ_G0014547	Stn1	98	70.620	ENSCCAG00000020507	STN1	100	70.620	Cebus_capucinus
MGP_PahariEiJ_G0014547	Stn1	98	70.889	ENSCATG00000043103	STN1	100	70.889	Cercocebus_atys
MGP_PahariEiJ_G0014547	Stn1	100	67.196	ENSCLAG00000001617	STN1	100	67.196	Chinchilla_lanigera
MGP_PahariEiJ_G0014547	Stn1	98	71.429	ENSCSAG00000005318	STN1	100	71.429	Chlorocebus_sabaeus
MGP_PahariEiJ_G0014547	Stn1	98	54.570	ENSCPBG00000024481	STN1	100	54.570	Chrysemys_picta_bellii
MGP_PahariEiJ_G0014547	Stn1	98	71.159	ENSCANG00000029004	STN1	100	71.159	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0014547	Stn1	100	70.370	ENSCGRG00001023175	Stn1	100	70.370	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0014547	Stn1	100	79.894	ENSCGRG00000004324	Stn1	100	79.894	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0014547	Stn1	95	42.896	ENSDARG00000007734	stn1	96	42.896	Danio_rerio
MGP_PahariEiJ_G0014547	Stn1	96	65.625	ENSDNOG00000011022	STN1	99	65.625	Dasypus_novemcinctus
MGP_PahariEiJ_G0014547	Stn1	94	70.308	ENSDORG00000005994	Stn1	100	69.811	Dipodomys_ordii
MGP_PahariEiJ_G0014547	Stn1	97	61.247	ENSETEG00000013967	STN1	99	61.247	Echinops_telfairi
MGP_PahariEiJ_G0014547	Stn1	98	69.624	ENSEASG00005015134	STN1	100	69.624	Equus_asinus_asinus
MGP_PahariEiJ_G0014547	Stn1	98	68.817	ENSECAG00000023477	STN1	100	69.355	Equus_caballus
MGP_PahariEiJ_G0014547	Stn1	94	67.507	ENSFCAG00000030378	STN1	100	67.116	Felis_catus
MGP_PahariEiJ_G0014547	Stn1	98	54.692	ENSFALG00000008791	STN1	100	54.692	Ficedula_albicollis
MGP_PahariEiJ_G0014547	Stn1	100	64.550	ENSFDAG00000007528	STN1	100	64.550	Fukomys_damarensis
MGP_PahariEiJ_G0014547	Stn1	98	53.887	ENSGALG00000008304	STN1	100	53.887	Gallus_gallus
MGP_PahariEiJ_G0014547	Stn1	94	50.633	ENSGAGG00000003673	STN1	93	50.633	Gopherus_agassizii
MGP_PahariEiJ_G0014547	Stn1	98	71.698	ENSGGOG00000008979	STN1	100	71.698	Gorilla_gorilla
MGP_PahariEiJ_G0014547	Stn1	100	66.667	ENSHGLG00000002775	OBFC1	100	66.667	Heterocephalus_glaber_female
MGP_PahariEiJ_G0014547	Stn1	100	66.402	ENSHGLG00100012701	STN1	100	66.402	Heterocephalus_glaber_male
MGP_PahariEiJ_G0014547	Stn1	96	41.257	ENSHCOG00000002048	stn1	98	41.257	Hippocampus_comes
MGP_PahariEiJ_G0014547	Stn1	100	67.989	ENSSTOG00000011905	STN1	100	67.989	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0014547	Stn1	100	65.963	ENSJJAG00000020389	Stn1	100	65.963	Jaculus_jaculus
MGP_PahariEiJ_G0014547	Stn1	97	44.149	ENSLACG00000012381	STN1	99	44.149	Latimeria_chalumnae
MGP_PahariEiJ_G0014547	Stn1	99	66.929	ENSLAFG00000004232	STN1	99	66.929	Loxodonta_africana
MGP_PahariEiJ_G0014547	Stn1	98	70.889	ENSMFAG00000041817	STN1	100	70.889	Macaca_fascicularis
MGP_PahariEiJ_G0014547	Stn1	98	70.889	ENSMMUG00000015323	STN1	100	70.889	Macaca_mulatta
MGP_PahariEiJ_G0014547	Stn1	98	70.081	ENSMNEG00000031906	STN1	100	70.081	Macaca_nemestrina
MGP_PahariEiJ_G0014547	Stn1	98	71.159	ENSMLEG00000040619	STN1	100	71.159	Mandrillus_leucophaeus
MGP_PahariEiJ_G0014547	Stn1	99	55.556	ENSMGAG00000010550	STN1	99	55.556	Meleagris_gallopavo
MGP_PahariEiJ_G0014547	Stn1	99	82.979	ENSMAUG00000015671	Stn1	99	82.979	Mesocricetus_auratus
MGP_PahariEiJ_G0014547	Stn1	98	66.846	ENSMICG00000012547	STN1	100	67.655	Microcebus_murinus
MGP_PahariEiJ_G0014547	Stn1	99	76.946	ENSMOCG00000009637	Stn1	100	73.267	Microtus_ochrogaster
MGP_PahariEiJ_G0014547	Stn1	98	58.491	ENSMODG00000011003	STN1	100	58.491	Monodelphis_domestica
MGP_PahariEiJ_G0014547	Stn1	100	94.974	MGP_CAROLIEiJ_G0023057	Stn1	100	94.974	Mus_caroli
MGP_PahariEiJ_G0014547	Stn1	100	94.444	ENSMUSG00000042694	Stn1	100	94.444	Mus_musculus
MGP_PahariEiJ_G0014547	Stn1	100	93.915	MGP_SPRETEiJ_G0023978	Stn1	100	93.915	Mus_spretus
MGP_PahariEiJ_G0014547	Stn1	98	62.264	ENSMPUG00000016800	STN1	100	62.264	Mustela_putorius_furo
MGP_PahariEiJ_G0014547	Stn1	99	67.801	ENSMLUG00000002037	STN1	99	67.801	Myotis_lucifugus
MGP_PahariEiJ_G0014547	Stn1	100	74.339	ENSNGAG00000023986	Stn1	100	74.339	Nannospalax_galili
MGP_PahariEiJ_G0014547	Stn1	98	71.968	ENSNLEG00000015282	STN1	100	71.968	Nomascus_leucogenys
MGP_PahariEiJ_G0014547	Stn1	98	67.655	ENSOPRG00000010707	STN1	100	67.655	Ochotona_princeps
MGP_PahariEiJ_G0014547	Stn1	100	61.640	ENSODEG00000007270	STN1	100	61.640	Octodon_degus
MGP_PahariEiJ_G0014547	Stn1	96	55.525	ENSOANG00000001628	STN1	98	55.525	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0014547	Stn1	100	71.164	ENSOCUG00000003028	STN1	100	71.164	Oryctolagus_cuniculus
MGP_PahariEiJ_G0014547	Stn1	96	41.555	ENSORLG00000002353	stn1	99	41.555	Oryzias_latipes
MGP_PahariEiJ_G0014547	Stn1	96	40.741	ENSORLG00020012935	stn1	98	40.741	Oryzias_latipes_hni
MGP_PahariEiJ_G0014547	Stn1	96	41.823	ENSORLG00015012154	stn1	98	41.823	Oryzias_latipes_hsok
MGP_PahariEiJ_G0014547	Stn1	99	66.491	ENSOGAG00000008722	STN1	99	66.491	Otolemur_garnettii
MGP_PahariEiJ_G0014547	Stn1	99	66.053	ENSOARG00000004883	STN1	99	66.053	Ovis_aries
MGP_PahariEiJ_G0014547	Stn1	98	71.698	ENSPPAG00000030947	STN1	100	71.698	Pan_paniscus
MGP_PahariEiJ_G0014547	Stn1	94	67.787	ENSPPRG00000010476	STN1	100	67.385	Panthera_pardus
MGP_PahariEiJ_G0014547	Stn1	94	66.482	ENSPTIG00000017333	STN1	100	66.133	Panthera_tigris_altaica
MGP_PahariEiJ_G0014547	Stn1	98	71.698	ENSPTRG00000002919	STN1	100	71.698	Pan_troglodytes
MGP_PahariEiJ_G0014547	Stn1	98	70.889	ENSPANG00000020926	STN1	100	70.889	Papio_anubis
MGP_PahariEiJ_G0014547	Stn1	95	40.599	ENSPKIG00000000721	stn1	97	40.599	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0014547	Stn1	98	52.128	ENSPSIG00000010802	STN1	100	52.128	Pelodiscus_sinensis
MGP_PahariEiJ_G0014547	Stn1	100	80.475	ENSPEMG00000013944	Stn1	100	80.475	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0014547	Stn1	97	60.656	ENSPCIG00000024497	STN1	99	60.656	Phascolarctos_cinereus
MGP_PahariEiJ_G0014547	Stn1	98	71.698	ENSPPYG00000002628	STN1	100	71.698	Pongo_abelii
MGP_PahariEiJ_G0014547	Stn1	98	69.542	ENSPCOG00000017648	STN1	100	69.542	Propithecus_coquereli
MGP_PahariEiJ_G0014547	Stn1	98	65.499	ENSPVAG00000004187	STN1	100	65.499	Pteropus_vampyrus
MGP_PahariEiJ_G0014547	Stn1	100	87.302	ENSRNOG00000020376	Stn1	100	87.302	Rattus_norvegicus
MGP_PahariEiJ_G0014547	Stn1	98	71.159	ENSRBIG00000039819	STN1	100	71.159	Rhinopithecus_bieti
MGP_PahariEiJ_G0014547	Stn1	98	71.429	ENSRROG00000013903	STN1	100	71.429	Rhinopithecus_roxellana
MGP_PahariEiJ_G0014547	Stn1	98	71.429	ENSSBOG00000031516	STN1	100	71.429	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0014547	Stn1	97	60.763	ENSSHAG00000017550	STN1	99	60.763	Sarcophilus_harrisii
MGP_PahariEiJ_G0014547	Stn1	96	41.509	ENSSFOG00015004107	stn1	98	41.509	Scleropages_formosus
MGP_PahariEiJ_G0014547	Stn1	99	67.200	ENSSSCG00000010605	STN1	86	67.200	Sus_scrofa
MGP_PahariEiJ_G0014547	Stn1	98	53.083	ENSTGUG00000010354	STN1	100	53.083	Taeniopygia_guttata
MGP_PahariEiJ_G0014547	Stn1	98	44.652	ENSTNIG00000014162	stn1	98	44.652	Tetraodon_nigroviridis
MGP_PahariEiJ_G0014547	Stn1	65	71.282	ENSTBEG00000000659	STN1	66	71.282	Tupaia_belangeri
MGP_PahariEiJ_G0014547	Stn1	98	66.846	ENSTTRG00000003375	STN1	100	66.846	Tursiops_truncatus
MGP_PahariEiJ_G0014547	Stn1	98	61.456	ENSUMAG00000023647	STN1	100	61.456	Ursus_maritimus
MGP_PahariEiJ_G0014547	Stn1	98	68.464	ENSVPAG00000002530	STN1	100	68.464	Vicugna_pacos
MGP_PahariEiJ_G0014547	Stn1	99	65.608	ENSVVUG00000004636	-	61	65.608	Vulpes_vulpes
MGP_PahariEiJ_G0014547	Stn1	94	46.961	ENSXETG00000011402	STN1	99	46.113	Xenopus_tropicalis