EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_PahariEiJ_G0014560 (Gene tree)
Gene ID
110323572
Gene Symbol
Smndc1
Alias
2410004J23Rik|4933440I19Rik
Full Name
survival motor neuron domain containing 1
Gene Type
protein_coding
Species
Mus_pahari
Status
putative
Strand
Minus strand
Length
11985 bases
Position
chr1:164538035-164550019
Accession
110323572
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_PahariEiJ_P0022098SMNPF06003.128.4e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_PahariEiJ_T0022098-2155XM_021200859MGP_PahariEiJ_P0022098238 (aa)XP_021056518UPI000A31235E
Gene Model
Click here to download MGP_PahariEiJ_G0014560's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0014560's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_PahariEiJ_G0014560Smndc110099.160ENSG00000119953SMNDC110099.160Homo_sapiens
MGP_PahariEiJ_G0014560Smndc110075.210ENSAPOG00000021772smndc110075.210Acanthochromis_polyacanthus
MGP_PahariEiJ_G0014560Smndc110098.739ENSAMEG00000005251SMNDC110098.739Ailuropoda_melanoleuca
MGP_PahariEiJ_G0014560Smndc110075.630ENSACIG00000004819smndc110075.630Amphilophus_citrinellus
MGP_PahariEiJ_G0014560Smndc110075.210ENSAOCG00000017869smndc110075.210Amphiprion_ocellaris
MGP_PahariEiJ_G0014560Smndc110075.210ENSAPEG00000007752smndc110075.210Amphiprion_percula
MGP_PahariEiJ_G0014560Smndc110076.050ENSATEG00000006830smndc110076.050Anabas_testudineus
MGP_PahariEiJ_G0014560Smndc18395.960ENSAPLG00000004322SMNDC110095.960Anas_platyrhynchos
MGP_PahariEiJ_G0014560Smndc110094.958ENSACAG00000005983SMNDC110094.958Anolis_carolinensis
MGP_PahariEiJ_G0014560Smndc110098.739ENSANAG00000032875SMNDC110098.739Aotus_nancymaae
MGP_PahariEiJ_G0014560Smndc110076.050ENSACLG00000016360smndc110076.050Astatotilapia_calliptera
MGP_PahariEiJ_G0014560Smndc110076.471ENSAMXG00000020310smndc110076.471Astyanax_mexicanus
MGP_PahariEiJ_G0014560Smndc110098.319ENSBTAG00000000551SMNDC110098.319Bos_taurus
MGP_PahariEiJ_G0014560Smndc110098.739ENSCJAG00000018624SMNDC110098.739Callithrix_jacchus
MGP_PahariEiJ_G0014560Smndc110098.739ENSCAFG00000010720SMNDC110098.739Canis_familiaris
MGP_PahariEiJ_G0014560Smndc110098.739ENSCAFG00020011913SMNDC110098.739Canis_lupus_dingo
MGP_PahariEiJ_G0014560Smndc110098.319ENSCHIG00000010604SMNDC110098.319Capra_hircus
MGP_PahariEiJ_G0014560Smndc110099.160ENSTSYG00000026454SMNDC110099.160Carlito_syrichta
MGP_PahariEiJ_G0014560Smndc18497.512ENSCAPG00000009132SMNDC110097.512Cavia_aperea
MGP_PahariEiJ_G0014560Smndc110097.899ENSCPOG00000031666SMNDC110097.899Cavia_porcellus
MGP_PahariEiJ_G0014560Smndc110098.739ENSCCAG00000021793SMNDC110098.739Cebus_capucinus
MGP_PahariEiJ_G0014560Smndc110098.319ENSCATG00000035910SMNDC110098.319Cercocebus_atys
MGP_PahariEiJ_G0014560Smndc110097.899ENSCLAG00000002838SMNDC110097.899Chinchilla_lanigera
MGP_PahariEiJ_G0014560Smndc110098.739ENSCSAG00000005169SMNDC110098.739Chlorocebus_sabaeus
MGP_PahariEiJ_G0014560Smndc18197.927ENSCHOG00000002936SMNDC110097.927Choloepus_hoffmanni
MGP_PahariEiJ_G0014560Smndc110097.479ENSCPBG00000012837SMNDC110097.479Chrysemys_picta_bellii
MGP_PahariEiJ_G0014560Smndc110078.151ENSCANG00000036994-10078.151Colobus_angolensis_palliatus
MGP_PahariEiJ_G0014560Smndc110098.739ENSCANG00000031720-10098.739Colobus_angolensis_palliatus
MGP_PahariEiJ_G0014560Smndc110091.176ENSCANG00000034620-10091.176Colobus_angolensis_palliatus
MGP_PahariEiJ_G0014560Smndc110097.899ENSCGRG00001012973Smndc110097.899Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0014560Smndc110097.899ENSCGRG00000012396Smndc110097.899Cricetulus_griseus_crigri
MGP_PahariEiJ_G0014560Smndc110076.050ENSCSEG00000015621smndc110076.050Cynoglossus_semilaevis
MGP_PahariEiJ_G0014560Smndc110076.891ENSCVAG00000020432smndc110076.891Cyprinodon_variegatus
MGP_PahariEiJ_G0014560Smndc110078.571ENSDARG00000056235smndc110078.571Danio_rerio
MGP_PahariEiJ_G0014560Smndc110098.739ENSDNOG00000016387SMNDC18398.739Dasypus_novemcinctus
MGP_PahariEiJ_G0014560Smndc110098.739ENSDORG00000023715Smndc110098.739Dipodomys_ordii
MGP_PahariEiJ_G0014560Smndc19541.767FBgn0039977CG174549842.972Drosophila_melanogaster
MGP_PahariEiJ_G0014560Smndc110070.954ENSEBUG00000010929smndc110070.954Eptatretus_burgeri
MGP_PahariEiJ_G0014560Smndc110098.739ENSEASG00005014930SMNDC110098.739Equus_asinus_asinus
MGP_PahariEiJ_G0014560Smndc110098.739ENSECAG00000029973SMNDC110098.739Equus_caballus
MGP_PahariEiJ_G0014560Smndc18369.697ENSEEUG00000013407-10069.697Erinaceus_europaeus
MGP_PahariEiJ_G0014560Smndc110078.151ENSELUG00000000227smndc110078.151Esox_lucius
MGP_PahariEiJ_G0014560Smndc110098.739ENSFCAG00000027353SMNDC110098.739Felis_catus
MGP_PahariEiJ_G0014560Smndc110095.798ENSFALG00000002306SMNDC110095.798Ficedula_albicollis
MGP_PahariEiJ_G0014560Smndc110098.319ENSFDAG00000006468SMNDC110098.319Fukomys_damarensis
MGP_PahariEiJ_G0014560Smndc110076.471ENSFHEG00000020150smndc110076.471Fundulus_heteroclitus
MGP_PahariEiJ_G0014560Smndc110077.311ENSGMOG00000016585smndc110077.311Gadus_morhua
MGP_PahariEiJ_G0014560Smndc110095.798ENSGALG00000008561SMNDC110095.798Gallus_gallus
MGP_PahariEiJ_G0014560Smndc110075.210ENSGAFG00000011582smndc110075.210Gambusia_affinis
MGP_PahariEiJ_G0014560Smndc110075.630ENSGACG00000009468smndc110075.630Gasterosteus_aculeatus
MGP_PahariEiJ_G0014560Smndc110097.479ENSGAGG00000024547SMNDC110097.479Gopherus_agassizii
MGP_PahariEiJ_G0014560Smndc110098.739ENSGGOG00000010071SMNDC110098.739Gorilla_gorilla
MGP_PahariEiJ_G0014560Smndc110076.050ENSHBUG00000017596smndc110076.050Haplochromis_burtoni
MGP_PahariEiJ_G0014560Smndc110098.319ENSHGLG00000013390-10098.319Heterocephalus_glaber_female
MGP_PahariEiJ_G0014560Smndc110068.033ENSHGLG00000001157-10064.898Heterocephalus_glaber_female
MGP_PahariEiJ_G0014560Smndc110076.230ENSHGLG00100004278-10075.820Heterocephalus_glaber_male
MGP_PahariEiJ_G0014560Smndc110098.319ENSHGLG00100004814-10098.319Heterocephalus_glaber_male
MGP_PahariEiJ_G0014560Smndc110074.477ENSHCOG00000000783smndc110074.477Hippocampus_comes
MGP_PahariEiJ_G0014560Smndc110077.731ENSIPUG00000004217smndc110077.731Ictalurus_punctatus
MGP_PahariEiJ_G0014560Smndc110099.160ENSSTOG00000006088SMNDC110099.160Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0014560Smndc110097.899ENSJJAG00000019974Smndc110097.899Jaculus_jaculus
MGP_PahariEiJ_G0014560Smndc110075.210ENSKMAG00000020134smndc110075.210Kryptolebias_marmoratus
MGP_PahariEiJ_G0014560Smndc110074.370ENSLBEG00000004598smndc110074.370Labrus_bergylta
MGP_PahariEiJ_G0014560Smndc110084.034ENSLACG00000007784SMNDC110084.034Latimeria_chalumnae
MGP_PahariEiJ_G0014560Smndc110084.034ENSLOCG00000012355smndc110084.034Lepisosteus_oculatus
MGP_PahariEiJ_G0014560Smndc110098.319ENSLAFG00000014353SMNDC110098.319Loxodonta_africana
MGP_PahariEiJ_G0014560Smndc110080.672ENSMFAG00000038381-10080.672Macaca_fascicularis
MGP_PahariEiJ_G0014560Smndc110098.739ENSMFAG00000002433-10098.739Macaca_fascicularis
MGP_PahariEiJ_G0014560Smndc110098.739ENSMMUG00000007775SMNDC110098.739Macaca_mulatta
MGP_PahariEiJ_G0014560Smndc110080.672ENSMMUG00000045875-10080.672Macaca_mulatta
MGP_PahariEiJ_G0014560Smndc110087.395ENSMNEG00000033853-10087.395Macaca_nemestrina
MGP_PahariEiJ_G0014560Smndc110098.739ENSMNEG00000042963-10098.739Macaca_nemestrina
MGP_PahariEiJ_G0014560Smndc110092.469ENSMLEG00000040236SMNDC110092.050Mandrillus_leucophaeus
MGP_PahariEiJ_G0014560Smndc18973.239ENSMAMG00000018233smndc18773.239Mastacembelus_armatus
MGP_PahariEiJ_G0014560Smndc110076.050ENSMZEG00005027510smndc110076.050Maylandia_zebra
MGP_PahariEiJ_G0014560Smndc18495.500ENSMGAG00000010777SMNDC18495.500Meleagris_gallopavo
MGP_PahariEiJ_G0014560Smndc19979.325ENSMAUG00000005459-9379.325Mesocricetus_auratus
MGP_PahariEiJ_G0014560Smndc110098.739ENSMAUG00000012243-10098.739Mesocricetus_auratus
MGP_PahariEiJ_G0014560Smndc110085.714ENSMICG00000031640-10085.714Microcebus_murinus
MGP_PahariEiJ_G0014560Smndc110097.899ENSMICG00000027336-10097.899Microcebus_murinus
MGP_PahariEiJ_G0014560Smndc110098.319ENSMOCG00000002458Smndc110098.319Microtus_ochrogaster
MGP_PahariEiJ_G0014560Smndc110076.471ENSMMOG00000008856smndc110076.471Mola_mola
MGP_PahariEiJ_G0014560Smndc110099.580ENSMODG00000010542SMNDC110099.580Monodelphis_domestica
MGP_PahariEiJ_G0014560Smndc110076.050ENSMALG00000017598smndc110076.050Monopterus_albus
MGP_PahariEiJ_G0014560Smndc110099.160MGP_CAROLIEiJ_G0023072Smndc110099.160Mus_caroli
MGP_PahariEiJ_G0014560Smndc110099.580ENSMUSG00000025024Smndc110099.580Mus_musculus
MGP_PahariEiJ_G0014560Smndc110099.580MGP_SPRETEiJ_G0023993Smndc110099.580Mus_spretus
MGP_PahariEiJ_G0014560Smndc110098.739ENSMPUG00000002089SMNDC110098.739Mustela_putorius_furo
MGP_PahariEiJ_G0014560Smndc110098.319ENSMLUG00000016007SMNDC110098.319Myotis_lucifugus
MGP_PahariEiJ_G0014560Smndc110098.319ENSNGAG00000006833Smndc110098.319Nannospalax_galili
MGP_PahariEiJ_G0014560Smndc110075.630ENSNBRG00000017089smndc110075.630Neolamprologus_brichardi
MGP_PahariEiJ_G0014560Smndc110098.739ENSNLEG00000015471SMNDC110098.739Nomascus_leucogenys
MGP_PahariEiJ_G0014560Smndc18258.000ENSMEUG00000010120-9958.500Notamacropus_eugenii
MGP_PahariEiJ_G0014560Smndc110097.899ENSOPRG00000015348SMNDC110097.899Ochotona_princeps
MGP_PahariEiJ_G0014560Smndc110069.328ENSODEG00000007594-10066.387Octodon_degus
MGP_PahariEiJ_G0014560Smndc110075.630ENSONIG00000000434smndc110075.630Oreochromis_niloticus
MGP_PahariEiJ_G0014560Smndc110098.319ENSOANG00000001598SMNDC110098.319Ornithorhynchus_anatinus
MGP_PahariEiJ_G0014560Smndc110097.899ENSOCUG00000008145-10097.899Oryctolagus_cuniculus
MGP_PahariEiJ_G0014560Smndc110074.370ENSOCUG00000012274-10076.050Oryctolagus_cuniculus
MGP_PahariEiJ_G0014560Smndc110075.630ENSORLG00000005934smndc19575.630Oryzias_latipes
MGP_PahariEiJ_G0014560Smndc110075.630ENSORLG00020008796smndc19575.630Oryzias_latipes_hni
MGP_PahariEiJ_G0014560Smndc110075.630ENSORLG00015013666smndc110075.630Oryzias_latipes_hsok
MGP_PahariEiJ_G0014560Smndc110077.311ENSOMEG00000007590smndc110077.311Oryzias_melastigma
MGP_PahariEiJ_G0014560Smndc110098.319ENSOGAG00000000571SMNDC110098.319Otolemur_garnettii
MGP_PahariEiJ_G0014560Smndc110098.319ENSOARG00000009500SMNDC110098.319Ovis_aries
MGP_PahariEiJ_G0014560Smndc110098.739ENSPPAG00000027815SMNDC110098.739Pan_paniscus
MGP_PahariEiJ_G0014560Smndc110098.739ENSPPRG00000013749SMNDC110098.739Panthera_pardus
MGP_PahariEiJ_G0014560Smndc110098.739ENSPTIG00000011451SMNDC110098.739Panthera_tigris_altaica
MGP_PahariEiJ_G0014560Smndc110098.739ENSPTRG00000002937SMNDC110098.739Pan_troglodytes
MGP_PahariEiJ_G0014560Smndc110092.857ENSPANG00000031346-10092.857Papio_anubis
MGP_PahariEiJ_G0014560Smndc110098.739ENSPANG00000020805-10098.739Papio_anubis
MGP_PahariEiJ_G0014560Smndc110080.252ENSPKIG00000017164smndc110080.252Paramormyrops_kingsleyae
MGP_PahariEiJ_G0014560Smndc110097.899ENSPSIG00000012257SMNDC110097.899Pelodiscus_sinensis
MGP_PahariEiJ_G0014560Smndc110073.529ENSPMGG00000015651smndc110073.529Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0014560Smndc110098.739ENSPEMG00000022058Smndc110098.739Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0014560Smndc110067.213ENSPMAG00000007705smndc110067.623Petromyzon_marinus
MGP_PahariEiJ_G0014560Smndc110099.580ENSPCIG00000018419SMNDC110099.580Phascolarctos_cinereus
MGP_PahariEiJ_G0014560Smndc19762.174ENSPCIG00000009693-10062.174Phascolarctos_cinereus
MGP_PahariEiJ_G0014560Smndc110075.630ENSPFOG00000017113smndc110075.630Poecilia_formosa
MGP_PahariEiJ_G0014560Smndc110076.050ENSPLAG00000010372smndc110076.050Poecilia_latipinna
MGP_PahariEiJ_G0014560Smndc110076.050ENSPMEG00000012288smndc110076.050Poecilia_mexicana
MGP_PahariEiJ_G0014560Smndc110075.210ENSPREG00000012279smndc110075.210Poecilia_reticulata
MGP_PahariEiJ_G0014560Smndc110098.739ENSPPYG00000002643SMNDC110098.739Pongo_abelii
MGP_PahariEiJ_G0014560Smndc18197.927ENSPCAG00000016183SMNDC110097.927Procavia_capensis
MGP_PahariEiJ_G0014560Smndc110098.319ENSPCOG00000024343SMNDC110098.319Propithecus_coquereli
MGP_PahariEiJ_G0014560Smndc110076.050ENSPVAG00000004368SMNDC110076.050Pteropus_vampyrus
MGP_PahariEiJ_G0014560Smndc19269.778ENSPNYG00000024093smndc19869.778Pundamilia_nyererei
MGP_PahariEiJ_G0014560Smndc110076.891ENSPNAG00000025285smndc110076.891Pygocentrus_nattereri
MGP_PahariEiJ_G0014560Smndc110099.160ENSRNOG00000014833Smndc110099.160Rattus_norvegicus
MGP_PahariEiJ_G0014560Smndc110098.319ENSRBIG00000000224-10098.319Rhinopithecus_bieti
MGP_PahariEiJ_G0014560Smndc110082.353ENSRBIG00000032452-10082.353Rhinopithecus_bieti
MGP_PahariEiJ_G0014560Smndc110098.739ENSRROG00000044992-10098.739Rhinopithecus_roxellana
MGP_PahariEiJ_G0014560Smndc110082.773ENSRROG00000039125-10082.773Rhinopithecus_roxellana
MGP_PahariEiJ_G0014560Smndc110098.739ENSSBOG00000026789SMNDC110098.739Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0014560Smndc110099.580ENSSHAG00000015189SMNDC110099.580Sarcophilus_harrisii
MGP_PahariEiJ_G0014560Smndc110080.252ENSSFOG00015008311smndc110080.252Scleropages_formosus
MGP_PahariEiJ_G0014560Smndc110075.630ENSSMAG00000020118smndc110075.630Scophthalmus_maximus
MGP_PahariEiJ_G0014560Smndc110076.471ENSSDUG00000015330smndc110076.471Seriola_dumerili
MGP_PahariEiJ_G0014560Smndc110076.471ENSSLDG00000017325smndc110076.471Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0014560Smndc110097.899ENSSARG00000006063SMNDC110097.899Sorex_araneus
MGP_PahariEiJ_G0014560Smndc110096.218ENSSPUG00000004574SMNDC110096.218Sphenodon_punctatus
MGP_PahariEiJ_G0014560Smndc110074.370ENSSPAG00000000338smndc110074.370Stegastes_partitus
MGP_PahariEiJ_G0014560Smndc110098.319ENSSSCG00000030507SMNDC110098.319Sus_scrofa
MGP_PahariEiJ_G0014560Smndc110095.798ENSTGUG00000010599SMNDC110095.798Taeniopygia_guttata
MGP_PahariEiJ_G0014560Smndc110073.950ENSTRUG00000023281smndc110073.950Takifugu_rubripes
MGP_PahariEiJ_G0014560Smndc110074.790ENSTNIG00000013331smndc110074.790Tetraodon_nigroviridis
MGP_PahariEiJ_G0014560Smndc110098.319ENSTBEG00000014337SMNDC110098.319Tupaia_belangeri
MGP_PahariEiJ_G0014560Smndc110098.739ENSUAMG00000008142SMNDC110098.739Ursus_americanus
MGP_PahariEiJ_G0014560Smndc110098.739ENSUMAG00000023722SMNDC110098.739Ursus_maritimus
MGP_PahariEiJ_G0014560Smndc18398.990ENSVPAG00000003402SMNDC110098.990Vicugna_pacos
MGP_PahariEiJ_G0014560Smndc110098.739ENSVVUG00000007820SMNDC110098.739Vulpes_vulpes
MGP_PahariEiJ_G0014560Smndc16082.394ENSXETG00000015415SMNDC110082.394Xenopus_tropicalis
MGP_PahariEiJ_G0014560Smndc110075.210ENSXCOG00000009159smndc110075.210Xiphophorus_couchianus
MGP_PahariEiJ_G0014560Smndc110074.790ENSXMAG00000012755smndc110074.790Xiphophorus_maculatus

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