EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0014716 (Gene tree)
Gene ID: 110327878
Gene Symbol: Ppan
Alias: A230087P06Rik|SSF1
Full Name: suppressor of SWI4 1 homolog
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 3695 bases
Position: chr10:16209013-16212707
Accession: 110327878
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0022556	Brix	PF04427.18	3.2e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0022559	-	1827	-	-	- (aa)	-	-
MGP_PahariEiJ_T0022558	-	652	-	-	- (aa)	-	-
MGP_PahariEiJ_T0022560	-	526	-	-	- (aa)	-	-
MGP_PahariEiJ_T0022561	-	389	-	-	- (aa)	-	-
MGP_PahariEiJ_T0022557	-	1093	-	-	- (aa)	-	-
MGP_PahariEiJ_T0022556	-	1676	XM_021207139	MGP_PahariEiJ_P0022556	470 (aa)	XP_021062798	UPI000A305FE8

Gene Model

Click here to download MGP_PahariEiJ_G0014716's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0014716's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0014716	Ppan	93	77.060	ENSG00000243207	PPAN-P2RY11	86	77.060	Homo_sapiens
MGP_PahariEiJ_G0014716	Ppan	93	76.770	ENSG00000130810	PPAN	99	89.952	Homo_sapiens
MGP_PahariEiJ_G0014716	Ppan	97	59.389	ENSAPOG00000017687	ppan	85	59.389	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0014716	Ppan	99	83.585	ENSAMEG00000011989	-	98	83.585	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0014716	Ppan	96	58.850	ENSACIG00000007417	ppan	85	58.850	Amphilophus_citrinellus
MGP_PahariEiJ_G0014716	Ppan	96	60.486	ENSAOCG00000005416	ppan	84	60.486	Amphiprion_ocellaris
MGP_PahariEiJ_G0014716	Ppan	96	60.044	ENSAPEG00000010382	ppan	84	60.044	Amphiprion_percula
MGP_PahariEiJ_G0014716	Ppan	87	62.836	ENSATEG00000021221	ppan	78	62.836	Anabas_testudineus
MGP_PahariEiJ_G0014716	Ppan	89	65.485	ENSACAG00000003838	-	78	65.485	Anolis_carolinensis
MGP_PahariEiJ_G0014716	Ppan	95	69.420	ENSANAG00000038012	-	98	75.661	Aotus_nancymaae
MGP_PahariEiJ_G0014716	Ppan	97	72.017	ENSANAG00000020371	-	97	72.234	Aotus_nancymaae
MGP_PahariEiJ_G0014716	Ppan	93	57.788	ENSACLG00000019215	ppan	84	57.788	Astatotilapia_calliptera
MGP_PahariEiJ_G0014716	Ppan	86	58.867	ENSAMXG00000032540	ppan	75	58.867	Astyanax_mexicanus
MGP_PahariEiJ_G0014716	Ppan	97	82.751	ENSBTAG00000012745	PPAN	97	82.751	Bos_taurus
MGP_PahariEiJ_G0014716	Ppan	71	38.123	WBGene00003062	lpd-6	75	35.360	Caenorhabditis_elegans
MGP_PahariEiJ_G0014716	Ppan	97	73.144	ENSCJAG00000039296	PPAN	97	73.144	Callithrix_jacchus
MGP_PahariEiJ_G0014716	Ppan	91	88.028	ENSCAFG00000017917	P2RY11	76	88.028	Canis_familiaris
MGP_PahariEiJ_G0014716	Ppan	96	84.768	ENSCAFG00020023621	-	98	83.585	Canis_lupus_dingo
MGP_PahariEiJ_G0014716	Ppan	95	84.494	ENSCHIG00000006450	-	98	82.314	Capra_hircus
MGP_PahariEiJ_G0014716	Ppan	58	90.909	ENSTSYG00000034845	-	87	90.909	Carlito_syrichta
MGP_PahariEiJ_G0014716	Ppan	79	81.402	ENSCPOG00000025539	-	99	81.402	Cavia_porcellus
MGP_PahariEiJ_G0014716	Ppan	95	74.049	ENSCCAG00000032527	-	94	73.719	Cebus_capucinus
MGP_PahariEiJ_G0014716	Ppan	92	78.311	ENSCATG00000040554	-	97	75.161	Cercocebus_atys
MGP_PahariEiJ_G0014716	Ppan	98	84.816	ENSCLAG00000009362	-	97	84.816	Chinchilla_lanigera
MGP_PahariEiJ_G0014716	Ppan	97	75.647	ENSCSAG00000007423	-	97	75.375	Chlorocebus_sabaeus
MGP_PahariEiJ_G0014716	Ppan	82	71.392	ENSCPBG00000005372	-	74	71.000	Chrysemys_picta_bellii
MGP_PahariEiJ_G0014716	Ppan	80	48.320	ENSCING00000005420	ppan	86	46.506	Ciona_intestinalis
MGP_PahariEiJ_G0014716	Ppan	94	43.478	ENSCSAVG00000005816	-	93	43.478	Ciona_savignyi
MGP_PahariEiJ_G0014716	Ppan	83	74.623	ENSCANG00000036259	-	96	74.010	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0014716	Ppan	99	88.486	ENSCGRG00001015990	Ppan	99	88.486	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0014716	Ppan	86	87.931	ENSCGRG00000012785	Ppan	99	87.931	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0014716	Ppan	85	64.500	ENSCSEG00000021023	ppan	72	64.500	Cynoglossus_semilaevis
MGP_PahariEiJ_G0014716	Ppan	87	61.951	ENSCVAG00000013547	ppan	76	61.951	Cyprinodon_variegatus
MGP_PahariEiJ_G0014716	Ppan	87	61.614	ENSDARG00000022232	ppan	78	61.614	Danio_rerio
MGP_PahariEiJ_G0014716	Ppan	64	90.667	ENSDNOG00000047670	-	68	90.667	Dasypus_novemcinctus
MGP_PahariEiJ_G0014716	Ppan	73	89.826	ENSDORG00000003829	Ppan	100	89.826	Dipodomys_ordii
MGP_PahariEiJ_G0014716	Ppan	87	41.119	FBgn0010770	ppan	92	39.013	Drosophila_melanogaster
MGP_PahariEiJ_G0014716	Ppan	97	77.802	ENSETEG00000019286	-	96	78.022	Echinops_telfairi
MGP_PahariEiJ_G0014716	Ppan	54	63.492	ENSEBUG00000004335	ppan	61	63.492	Eptatretus_burgeri
MGP_PahariEiJ_G0014716	Ppan	97	85.275	ENSEASG00005010574	-	96	85.275	Equus_asinus_asinus
MGP_PahariEiJ_G0014716	Ppan	97	84.868	ENSECAG00000024469	-	96	84.868	Equus_caballus
MGP_PahariEiJ_G0014716	Ppan	96	55.556	ENSELUG00000024160	ppan	87	56.897	Esox_lucius
MGP_PahariEiJ_G0014716	Ppan	97	80.306	ENSFCAG00000009388	-	89	80.306	Felis_catus
MGP_PahariEiJ_G0014716	Ppan	81	67.308	ENSFDAG00000008458	-	98	67.949	Fukomys_damarensis
MGP_PahariEiJ_G0014716	Ppan	88	61.151	ENSFHEG00000001554	ppan	78	61.151	Fundulus_heteroclitus
MGP_PahariEiJ_G0014716	Ppan	91	58.986	ENSGMOG00000003431	ppan	83	58.986	Gadus_morhua
MGP_PahariEiJ_G0014716	Ppan	85	57.538	ENSGALG00000051597	-	84	64.118	Gallus_gallus
MGP_PahariEiJ_G0014716	Ppan	87	62.439	ENSGAFG00000015832	ppan	76	62.439	Gambusia_affinis
MGP_PahariEiJ_G0014716	Ppan	94	57.743	ENSGACG00000013723	ppan	85	57.743	Gasterosteus_aculeatus
MGP_PahariEiJ_G0014716	Ppan	96	66.446	ENSGAGG00000009455	-	83	66.446	Gopherus_agassizii
MGP_PahariEiJ_G0014716	Ppan	82	75.689	ENSGGOG00000039459	PPAN	94	75.689	Gorilla_gorilla
MGP_PahariEiJ_G0014716	Ppan	92	58.525	ENSHBUG00000021830	ppan	82	58.525	Haplochromis_burtoni
MGP_PahariEiJ_G0014716	Ppan	96	83.589	ENSHGLG00000006964	-	96	83.589	Heterocephalus_glaber_female
MGP_PahariEiJ_G0014716	Ppan	96	83.589	ENSHGLG00100011618	-	96	83.589	Heterocephalus_glaber_male
MGP_PahariEiJ_G0014716	Ppan	86	51.117	ENSHCOG00000016751	ppan	75	50.962	Hippocampus_comes
MGP_PahariEiJ_G0014716	Ppan	88	63.723	ENSIPUG00000005082	ppan	75	63.723	Ictalurus_punctatus
MGP_PahariEiJ_G0014716	Ppan	95	85.426	ENSSTOG00000010828	-	94	85.426	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0014716	Ppan	97	85.777	ENSJJAG00000016362	Ppan	98	86.214	Jaculus_jaculus
MGP_PahariEiJ_G0014716	Ppan	89	60.190	ENSKMAG00000016509	ppan	79	60.190	Kryptolebias_marmoratus
MGP_PahariEiJ_G0014716	Ppan	85	62.657	ENSLBEG00000020897	ppan	94	62.657	Labrus_bergylta
MGP_PahariEiJ_G0014716	Ppan	100	52.731	ENSLACG00000001451	ppan	99	52.731	Latimeria_chalumnae
MGP_PahariEiJ_G0014716	Ppan	94	57.494	ENSLOCG00000007381	ppan	79	59.670	Lepisosteus_oculatus
MGP_PahariEiJ_G0014716	Ppan	98	80.435	ENSLAFG00000016399	-	97	80.652	Loxodonta_africana
MGP_PahariEiJ_G0014716	Ppan	97	75.862	ENSMFAG00000042854	-	97	75.589	Macaca_fascicularis
MGP_PahariEiJ_G0014716	Ppan	89	80.189	ENSMMUG00000017211	PPAN	100	88.660	Macaca_mulatta
MGP_PahariEiJ_G0014716	Ppan	97	75.862	ENSMNEG00000031363	-	97	75.589	Macaca_nemestrina
MGP_PahariEiJ_G0014716	Ppan	97	74.675	ENSMLEG00000042991	-	97	75.054	Mandrillus_leucophaeus
MGP_PahariEiJ_G0014716	Ppan	97	57.849	ENSMAMG00000012418	ppan	87	57.849	Mastacembelus_armatus
MGP_PahariEiJ_G0014716	Ppan	93	57.788	ENSMZEG00005018872	ppan	98	60.652	Maylandia_zebra
MGP_PahariEiJ_G0014716	Ppan	99	88.060	ENSMAUG00000000310	Ppan	100	88.060	Mesocricetus_auratus
MGP_PahariEiJ_G0014716	Ppan	96	80.000	ENSMICG00000047321	-	97	79.348	Microcebus_murinus
MGP_PahariEiJ_G0014716	Ppan	97	90.351	ENSMOCG00000016402	Ppan	98	90.351	Microtus_ochrogaster
MGP_PahariEiJ_G0014716	Ppan	92	60.046	ENSMMOG00000011584	ppan	84	60.046	Mola_mola
MGP_PahariEiJ_G0014716	Ppan	92	71.005	ENSMODG00000005158	PPAN	92	71.005	Monodelphis_domestica
MGP_PahariEiJ_G0014716	Ppan	96	60.173	ENSMALG00000015931	ppan	85	60.173	Monopterus_albus
MGP_PahariEiJ_G0014716	Ppan	100	95.532	MGP_CAROLIEiJ_G0031850	Ppan	100	95.532	Mus_caroli
MGP_PahariEiJ_G0014716	Ppan	99	95.299	ENSMUSG00000004100	Ppan	99	95.299	Mus_musculus
MGP_PahariEiJ_G0014716	Ppan	99	95.085	MGP_SPRETEiJ_G0032974	Ppan	99	95.085	Mus_spretus
MGP_PahariEiJ_G0014716	Ppan	99	84.914	ENSMPUG00000006866	-	98	84.914	Mustela_putorius_furo
MGP_PahariEiJ_G0014716	Ppan	98	81.818	ENSMLUG00000014186	-	97	81.818	Myotis_lucifugus
MGP_PahariEiJ_G0014716	Ppan	79	80.161	ENSNGAG00000012813	Ppan	100	80.161	Nannospalax_galili
MGP_PahariEiJ_G0014716	Ppan	98	55.889	ENSNBRG00000008460	ppan	88	55.889	Neolamprologus_brichardi
MGP_PahariEiJ_G0014716	Ppan	97	75.431	ENSNLEG00000012048	-	99	74.526	Nomascus_leucogenys
MGP_PahariEiJ_G0014716	Ppan	92	69.336	ENSMEUG00000007968	-	96	69.336	Notamacropus_eugenii
MGP_PahariEiJ_G0014716	Ppan	89	84.856	ENSOPRG00000006982	-	55	84.346	Ochotona_princeps
MGP_PahariEiJ_G0014716	Ppan	98	82.900	ENSODEG00000016743	-	97	82.900	Octodon_degus
MGP_PahariEiJ_G0014716	Ppan	93	58.239	ENSONIG00000001598	ppan	84	58.239	Oreochromis_niloticus
MGP_PahariEiJ_G0014716	Ppan	94	69.351	ENSOANG00000006740	PPAN	89	69.351	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0014716	Ppan	99	57.479	ENSORLG00000005634	ppan	89	57.479	Oryzias_latipes
MGP_PahariEiJ_G0014716	Ppan	99	57.479	ENSORLG00020003966	ppan	89	57.479	Oryzias_latipes_hni
MGP_PahariEiJ_G0014716	Ppan	99	57.265	ENSORLG00015016869	ppan	85	62.130	Oryzias_latipes_hsok
MGP_PahariEiJ_G0014716	Ppan	95	58.296	ENSOMEG00000023943	ppan	85	58.296	Oryzias_melastigma
MGP_PahariEiJ_G0014716	Ppan	98	77.273	ENSOGAG00000014454	-	97	77.273	Otolemur_garnettii
MGP_PahariEiJ_G0014716	Ppan	84	82.576	ENSOARG00000014981	-	83	82.576	Ovis_aries
MGP_PahariEiJ_G0014716	Ppan	93	76.770	ENSPPAG00000039744	-	95	76.770	Pan_paniscus
MGP_PahariEiJ_G0014716	Ppan	97	83.807	ENSPPRG00000023895	-	98	83.807	Panthera_pardus
MGP_PahariEiJ_G0014716	Ppan	87	82.927	ENSPTIG00000015960	-	97	82.927	Panthera_tigris_altaica
MGP_PahariEiJ_G0014716	Ppan	93	76.549	ENSPTRG00000010459	PPAN	95	76.549	Pan_troglodytes
MGP_PahariEiJ_G0014716	Ppan	92	78.311	ENSPANG00000005948	-	97	75.161	Papio_anubis
MGP_PahariEiJ_G0014716	Ppan	97	56.739	ENSPMGG00000001212	ppan	88	56.739	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0014716	Ppan	99	89.722	ENSPEMG00000015393	Ppan	100	89.722	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0014716	Ppan	98	66.309	ENSPCIG00000018786	-	85	66.309	Phascolarctos_cinereus
MGP_PahariEiJ_G0014716	Ppan	87	61.707	ENSPFOG00000005396	ppan	76	61.707	Poecilia_formosa
MGP_PahariEiJ_G0014716	Ppan	87	61.707	ENSPLAG00000021445	ppan	76	61.707	Poecilia_latipinna
MGP_PahariEiJ_G0014716	Ppan	87	61.951	ENSPMEG00000011625	ppan	76	61.951	Poecilia_mexicana
MGP_PahariEiJ_G0014716	Ppan	87	61.951	ENSPREG00000006330	ppan	76	61.951	Poecilia_reticulata
MGP_PahariEiJ_G0014716	Ppan	91	78.571	ENSPPYG00000009543	-	54	78.571	Pongo_abelii
MGP_PahariEiJ_G0014716	Ppan	83	79.082	ENSPCAG00000007303	-	96	79.082	Procavia_capensis
MGP_PahariEiJ_G0014716	Ppan	96	80.220	ENSPCOG00000027096	-	97	79.565	Propithecus_coquereli
MGP_PahariEiJ_G0014716	Ppan	98	80.477	ENSPVAG00000003673	-	97	80.477	Pteropus_vampyrus
MGP_PahariEiJ_G0014716	Ppan	93	58.014	ENSPNYG00000013872	ppan	78	60.488	Pundamilia_nyererei
MGP_PahariEiJ_G0014716	Ppan	96	57.675	ENSPNAG00000017058	ppan	82	57.895	Pygocentrus_nattereri
MGP_PahariEiJ_G0014716	Ppan	99	90.618	ENSRNOG00000020608	Ppan	99	90.618	Rattus_norvegicus
MGP_PahariEiJ_G0014716	Ppan	97	75.647	ENSRBIG00000041320	-	97	75.484	Rhinopithecus_bieti
MGP_PahariEiJ_G0014716	Ppan	81	82.940	ENSRROG00000038245	-	100	82.940	Rhinopithecus_roxellana
MGP_PahariEiJ_G0014716	Ppan	97	75.652	ENSRROG00000034660	-	97	75.378	Rhinopithecus_roxellana
MGP_PahariEiJ_G0014716	Ppan	77	34.123	YHR066W	-	94	34.325	Saccharomyces_cerevisiae
MGP_PahariEiJ_G0014716	Ppan	85	33.693	YDR312W	-	99	34.773	Saccharomyces_cerevisiae
MGP_PahariEiJ_G0014716	Ppan	97	72.707	ENSSBOG00000026246	-	97	72.707	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0014716	Ppan	83	67.092	ENSSHAG00000009305	-	94	67.092	Sarcophilus_harrisii
MGP_PahariEiJ_G0014716	Ppan	99	55.152	ENSSFOG00015023726	ppan	96	55.152	Scleropages_formosus
MGP_PahariEiJ_G0014716	Ppan	93	59.598	ENSSMAG00000004098	ppan	83	59.598	Scophthalmus_maximus
MGP_PahariEiJ_G0014716	Ppan	96	60.349	ENSSDUG00000021301	ppan	85	60.349	Seriola_dumerili
MGP_PahariEiJ_G0014716	Ppan	96	60.352	ENSSLDG00000016106	ppan	85	60.352	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0014716	Ppan	97	59.698	ENSSPAG00000000160	ppan	86	59.698	Stegastes_partitus
MGP_PahariEiJ_G0014716	Ppan	98	83.731	ENSSSCG00000013662	PPAN	97	83.731	Sus_scrofa
MGP_PahariEiJ_G0014716	Ppan	86	62.222	ENSTRUG00000007656	ppan	79	62.222	Takifugu_rubripes
MGP_PahariEiJ_G0014716	Ppan	90	60.920	ENSTNIG00000018564	ppan	97	58.991	Tetraodon_nigroviridis
MGP_PahariEiJ_G0014716	Ppan	64	88.430	ENSTBEG00000002721	-	64	88.430	Tupaia_belangeri
MGP_PahariEiJ_G0014716	Ppan	99	76.660	ENSTTRG00000004530	-	99	76.660	Tursiops_truncatus
MGP_PahariEiJ_G0014716	Ppan	96	84.989	ENSVVUG00000028309	-	98	83.801	Vulpes_vulpes
MGP_PahariEiJ_G0014716	Ppan	97	59.041	ENSXETG00000022055	ppan	82	59.041	Xenopus_tropicalis
MGP_PahariEiJ_G0014716	Ppan	91	60.138	ENSXMAG00000028708	ppan	81	60.138	Xiphophorus_maculatus