EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0014726 (Gene tree)
Gene ID: 110327407
Gene Symbol: -
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 17717 bases
Position: chr10:16390986-16408702
Accession: 110327407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0022571	RRM_1	PF00076.22	2.4e-28	1	2
MGP_PahariEiJ_P0022571	RRM_1	PF00076.22	2.4e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0022571	-	3421	-	MGP_PahariEiJ_P0022571	752 (aa)	XP_021062032	UPI000A30E9D6

Gene Model

Click here to download MGP_PahariEiJ_G0014726's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0014726's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0014726	-	66	44.982	MGP_PahariEiJ_G0028539	Raver2	64	58.503

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0014726	-	100	87.633	ENSG00000161847	RAVER1	100	86.303	Homo_sapiens
MGP_PahariEiJ_G0014726	-	100	86.968	ENSAMEG00000011738	RAVER1	98	86.037	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0014726	-	78	62.338	ENSAPEG00000010854	raver1	83	62.338	Amphiprion_percula
MGP_PahariEiJ_G0014726	-	97	49.734	ENSATEG00000021004	raver1	91	47.493	Anabas_testudineus
MGP_PahariEiJ_G0014726	-	84	59.112	ENSACAG00000008386	-	91	58.296	Anolis_carolinensis
MGP_PahariEiJ_G0014726	-	100	87.234	ENSANAG00000028226	RAVER1	98	86.436	Aotus_nancymaae
MGP_PahariEiJ_G0014726	-	74	87.500	ENSACLG00000018492	raver1	76	87.500	Astatotilapia_calliptera
MGP_PahariEiJ_G0014726	-	77	80.000	ENSAMXG00000005132	raver1	81	75.000	Astyanax_mexicanus
MGP_PahariEiJ_G0014726	-	100	86.303	ENSBTAG00000015721	RAVER1	95	93.915	Bos_taurus
MGP_PahariEiJ_G0014726	-	100	87.101	ENSCJAG00000005671	RAVER1	98	86.303	Callithrix_jacchus
MGP_PahariEiJ_G0014726	-	100	86.303	ENSCAFG00000017861	RAVER1	98	85.771	Canis_familiaris
MGP_PahariEiJ_G0014726	-	100	86.303	ENSCAFG00020024449	RAVER1	100	85.771	Canis_lupus_dingo
MGP_PahariEiJ_G0014726	-	100	85.904	ENSCHIG00000006718	RAVER1	100	85.239	Capra_hircus
MGP_PahariEiJ_G0014726	-	91	82.558	ENSTSYG00000027107	RAVER1	100	81.686	Carlito_syrichta
MGP_PahariEiJ_G0014726	-	90	84.831	ENSCAPG00000002269	RAVER1	100	85.272	Cavia_aperea
MGP_PahariEiJ_G0014726	-	100	86.968	ENSCPOG00000001008	RAVER1	100	87.500	Cavia_porcellus
MGP_PahariEiJ_G0014726	-	100	87.500	ENSCCAG00000031723	RAVER1	98	86.037	Cebus_capucinus
MGP_PahariEiJ_G0014726	-	100	88.298	ENSCATG00000043863	RAVER1	98	86.968	Cercocebus_atys
MGP_PahariEiJ_G0014726	-	100	88.313	ENSCLAG00000009336	RAVER1	100	87.782	Chinchilla_lanigera
MGP_PahariEiJ_G0014726	-	100	88.431	ENSCSAG00000007317	RAVER1	84	87.101	Chlorocebus_sabaeus
MGP_PahariEiJ_G0014726	-	96	62.516	ENSCPBG00000005349	-	96	61.054	Chrysemys_picta_bellii
MGP_PahariEiJ_G0014726	-	100	88.298	ENSCANG00000008337	RAVER1	98	86.968	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0014726	-	100	95.878	ENSCGRG00001013260	-	100	95.878	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0014726	-	100	95.878	ENSCGRG00000015138	-	100	95.878	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0014726	-	72	80.769	ENSCSEG00000021092	raver1	76	80.769	Cynoglossus_semilaevis
MGP_PahariEiJ_G0014726	-	98	49.349	ENSCVAG00000013971	raver1	81	61.616	Cyprinodon_variegatus
MGP_PahariEiJ_G0014726	-	100	79.974	ENSDORG00000010106	-	100	79.324	Dipodomys_ordii
MGP_PahariEiJ_G0014726	-	67	73.171	ENSETEG00000008201	-	73	88.325	Echinops_telfairi
MGP_PahariEiJ_G0014726	-	66	91.283	ENSEASG00005010544	-	90	86.420	Equus_asinus_asinus
MGP_PahariEiJ_G0014726	-	100	89.362	ENSECAG00000024966	RAVER1	98	88.564	Equus_caballus
MGP_PahariEiJ_G0014726	-	98	51.044	ENSELUG00000023287	raver1	92	49.531	Esox_lucius
MGP_PahariEiJ_G0014726	-	100	88.431	ENSFCAG00000009435	RAVER1	98	87.633	Felis_catus
MGP_PahariEiJ_G0014726	-	100	87.251	ENSFDAG00000015113	RAVER1	100	87.118	Fukomys_damarensis
MGP_PahariEiJ_G0014726	-	98	49.344	ENSGMOG00000003649	raver1	81	60.825	Gadus_morhua
MGP_PahariEiJ_G0014726	-	66	44.597	ENSGALG00000050608	-	52	42.801	Gallus_gallus
MGP_PahariEiJ_G0014726	-	96	61.660	ENSGAGG00000011748	-	93	77.364	Gopherus_agassizii
MGP_PahariEiJ_G0014726	-	100	87.367	ENSGGOG00000006015	RAVER1	98	86.037	Gorilla_gorilla
MGP_PahariEiJ_G0014726	-	74	84.314	ENSHBUG00000021210	raver1	76	84.314	Haplochromis_burtoni
MGP_PahariEiJ_G0014726	-	100	86.985	ENSHGLG00000015460	RAVER1	100	86.454	Heterocephalus_glaber_female
MGP_PahariEiJ_G0014726	-	100	86.985	ENSHGLG00100000812	RAVER1	100	86.454	Heterocephalus_glaber_male
MGP_PahariEiJ_G0014726	-	96	51.710	ENSIPUG00000013153	raver1	81	60.784	Ictalurus_punctatus
MGP_PahariEiJ_G0014726	-	100	89.229	ENSSTOG00000003241	RAVER1	100	87.766	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0014726	-	100	89.774	ENSJJAG00000018219	-	100	88.845	Jaculus_jaculus
MGP_PahariEiJ_G0014726	-	97	49.802	ENSKMAG00000017355	raver1	91	47.670	Kryptolebias_marmoratus
MGP_PahariEiJ_G0014726	-	89	49.057	ENSLBEG00000008268	raver1	68	54.651	Labrus_bergylta
MGP_PahariEiJ_G0014726	-	90	60.284	ENSLACG00000005809	-	99	60.000	Latimeria_chalumnae
MGP_PahariEiJ_G0014726	-	96	55.937	ENSLOCG00000007500	raver1	92	53.755	Lepisosteus_oculatus
MGP_PahariEiJ_G0014726	-	100	87.384	ENSLAFG00000003664	-	100	86.853	Loxodonta_africana
MGP_PahariEiJ_G0014726	-	100	87.899	ENSMFAG00000037977	RAVER1	98	86.569	Macaca_fascicularis
MGP_PahariEiJ_G0014726	-	100	88.165	ENSMMUG00000014897	RAVER1	98	86.835	Macaca_mulatta
MGP_PahariEiJ_G0014726	-	100	88.165	ENSMNEG00000028390	RAVER1	98	86.835	Macaca_nemestrina
MGP_PahariEiJ_G0014726	-	100	88.165	ENSMLEG00000041959	RAVER1	98	86.835	Mandrillus_leucophaeus
MGP_PahariEiJ_G0014726	-	75	79.245	ENSMAMG00000012059	raver1	56	79.245	Mastacembelus_armatus
MGP_PahariEiJ_G0014726	-	74	87.500	ENSMZEG00005019002	raver1	76	87.500	Maylandia_zebra
MGP_PahariEiJ_G0014726	-	100	94.814	ENSMAUG00000017948	-	100	93.750	Mesocricetus_auratus
MGP_PahariEiJ_G0014726	-	99	86.285	ENSMICG00000010326	RAVER1	99	85.353	Microcebus_murinus
MGP_PahariEiJ_G0014726	-	100	95.213	ENSMOCG00000015553	-	100	94.282	Microtus_ochrogaster
MGP_PahariEiJ_G0014726	-	99	50.066	ENSMMOG00000012093	raver1	77	72.581	Mola_mola
MGP_PahariEiJ_G0014726	-	97	74.114	ENSMODG00000005584	-	89	73.433	Monodelphis_domestica
MGP_PahariEiJ_G0014726	-	99	49.217	ENSMALG00000016569	raver1	80	56.481	Monopterus_albus
MGP_PahariEiJ_G0014726	-	100	97.606	MGP_CAROLIEiJ_G0031860	-	100	97.606	Mus_caroli
MGP_PahariEiJ_G0014726	-	100	97.606	ENSMUSG00000010205	Raver1	100	97.606	Mus_musculus
MGP_PahariEiJ_G0014726	-	100	97.473	MGP_SPRETEiJ_G0032984	-	100	97.473	Mus_spretus
MGP_PahariEiJ_G0014726	-	100	88.298	ENSMPUG00000006712	RAVER1	98	87.367	Mustela_putorius_furo
MGP_PahariEiJ_G0014726	-	100	84.973	ENSMLUG00000012328	RAVER1	100	84.574	Myotis_lucifugus
MGP_PahariEiJ_G0014726	-	100	89.907	ENSNGAG00000001260	-	100	88.977	Nannospalax_galili
MGP_PahariEiJ_G0014726	-	78	65.000	ENSNBRG00000010139	raver1	78	58.586	Neolamprologus_brichardi
MGP_PahariEiJ_G0014726	-	100	87.500	ENSNLEG00000012181	RAVER1	98	86.170	Nomascus_leucogenys
MGP_PahariEiJ_G0014726	-	90	73.178	ENSMEUG00000003281	-	100	71.137	Notamacropus_eugenii
MGP_PahariEiJ_G0014726	-	50	85.156	ENSOPRG00000005855	-	51	85.156	Ochotona_princeps
MGP_PahariEiJ_G0014726	-	100	87.384	ENSODEG00000016260	RAVER1	100	86.853	Octodon_degus
MGP_PahariEiJ_G0014726	-	78	63.750	ENSONIG00000001559	raver1	99	49.593	Oreochromis_niloticus
MGP_PahariEiJ_G0014726	-	100	81.782	ENSOCUG00000020918	RAVER1	98	81.516	Oryctolagus_cuniculus
MGP_PahariEiJ_G0014726	-	70	61.276	ENSORLG00000005458	raver1	67	62.808	Oryzias_latipes
MGP_PahariEiJ_G0014726	-	70	61.048	ENSORLG00020004392	raver1	67	62.562	Oryzias_latipes_hni
MGP_PahariEiJ_G0014726	-	70	60.820	ENSORLG00015017222	raver1	67	62.315	Oryzias_latipes_hsok
MGP_PahariEiJ_G0014726	-	76	83.673	ENSOMEG00000023956	raver1	67	83.673	Oryzias_melastigma
MGP_PahariEiJ_G0014726	-	100	87.101	ENSOGAG00000011071	RAVER1	98	86.037	Otolemur_garnettii
MGP_PahariEiJ_G0014726	-	100	84.309	ENSOARG00000015886	RAVER1	98	84.309	Ovis_aries
MGP_PahariEiJ_G0014726	-	100	87.633	ENSPPAG00000002611	RAVER1	98	86.303	Pan_paniscus
MGP_PahariEiJ_G0014726	-	100	88.830	ENSPPRG00000009912	RAVER1	98	88.032	Panthera_pardus
MGP_PahariEiJ_G0014726	-	100	87.633	ENSPTRG00000010466	RAVER1	98	86.303	Pan_troglodytes
MGP_PahariEiJ_G0014726	-	100	88.165	ENSPANG00000004122	RAVER1	98	86.835	Papio_anubis
MGP_PahariEiJ_G0014726	-	100	94.821	ENSPEMG00000016411	-	100	93.891	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0014726	-	100	75.626	ENSPCIG00000018695	-	99	79.605	Phascolarctos_cinereus
MGP_PahariEiJ_G0014726	-	100	47.484	ENSPLAG00000020793	raver1	58	69.914	Poecilia_latipinna
MGP_PahariEiJ_G0014726	-	99	50.591	ENSPMEG00000011220	raver1	91	49.072	Poecilia_mexicana
MGP_PahariEiJ_G0014726	-	74	90.698	ENSPREG00000006864	raver1	77	90.698	Poecilia_reticulata
MGP_PahariEiJ_G0014726	-	100	86.968	ENSPPYG00000010514	RAVER1	84	85.771	Pongo_abelii
MGP_PahariEiJ_G0014726	-	100	87.798	ENSPCOG00000026605	RAVER1	98	87.135	Propithecus_coquereli
MGP_PahariEiJ_G0014726	-	100	87.101	ENSPVAG00000003689	RAVER1	100	86.436	Pteropus_vampyrus
MGP_PahariEiJ_G0014726	-	64	84.314	ENSPNYG00000013284	raver1	65	84.314	Pundamilia_nyererei
MGP_PahariEiJ_G0014726	-	98	50.926	ENSPNAG00000015476	raver1	91	51.075	Pygocentrus_nattereri
MGP_PahariEiJ_G0014726	-	100	96.410	ENSRNOG00000020710	Raver1	100	96.410	Rattus_norvegicus
MGP_PahariEiJ_G0014726	-	100	87.500	ENSRBIG00000034702	RAVER1	98	86.835	Rhinopithecus_bieti
MGP_PahariEiJ_G0014726	-	100	85.904	ENSRROG00000031186	RAVER1	98	84.574	Rhinopithecus_roxellana
MGP_PahariEiJ_G0014726	-	100	84.973	ENSSBOG00000023423	RAVER1	98	83.511	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0014726	-	90	74.236	ENSSHAG00000008181	-	90	72.489	Sarcophilus_harrisii
MGP_PahariEiJ_G0014726	-	81	60.714	ENSSMAG00000004546	raver1	80	55.856	Scophthalmus_maximus
MGP_PahariEiJ_G0014726	-	98	50.393	ENSSDUG00000021063	raver1	84	55.367	Seriola_dumerili
MGP_PahariEiJ_G0014726	-	80	60.714	ENSSLDG00000014505	raver1	80	55.856	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0014726	-	79	61.905	ENSSPAG00000000688	raver1	80	57.658	Stegastes_partitus
MGP_PahariEiJ_G0014726	-	100	88.697	ENSSSCG00000013650	-	98	88.032	Sus_scrofa
MGP_PahariEiJ_G0014726	-	97	50.067	ENSTRUG00000025641	raver1	65	56.137	Takifugu_rubripes
MGP_PahariEiJ_G0014726	-	100	87.367	ENSTTRG00000009552	RAVER1	100	86.968	Tursiops_truncatus
MGP_PahariEiJ_G0014726	-	100	88.697	ENSUAMG00000020385	RAVER1	98	87.766	Ursus_americanus
MGP_PahariEiJ_G0014726	-	100	86.303	ENSVVUG00000028976	RAVER1	98	85.771	Vulpes_vulpes
MGP_PahariEiJ_G0014726	-	98	54.933	ENSXETG00000011622	raver1	95	53.940	Xenopus_tropicalis
MGP_PahariEiJ_G0014726	-	99	50.526	ENSXCOG00000016368	raver1	68	63.636	Xiphophorus_couchianus