EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0014760 (Gene tree)
Gene ID: 110327295
Gene Symbol: Elavl3
Alias: 2600009P04Rik|Huc|mHuC
Full Name: ELAV like RNA binding protein 3
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 38293 bases
Position: chr10:17363794-17402086
Accession: 110327295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0022664	RRM_5	PF13893.6	1.8e-13	1	2
MGP_PahariEiJ_P0022664	RRM_5	PF13893.6	1.8e-13	2	2
MGP_PahariEiJ_P0022664	RRM_1	PF00076.22	2.9e-64	1	3
MGP_PahariEiJ_P0022664	RRM_1	PF00076.22	2.9e-64	2	3
MGP_PahariEiJ_P0022664	RRM_1	PF00076.22	2.9e-64	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0022663	-	4890	-	MGP_PahariEiJ_P0022663	352 (aa)	-	-
MGP_PahariEiJ_T0022664	-	5354	-	MGP_PahariEiJ_P0022664	367 (aa)	XP_021061801	UPI000A312496

Gene Model

Click here to download MGP_PahariEiJ_G0014760's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0014760's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0014760	Elavl3	91	37.179	MGP_PahariEiJ_G0013755	Tial1	73	37.179
MGP_PahariEiJ_G0014760	Elavl3	93	34.940	MGP_PahariEiJ_G0018950	Pabpc2	59	34.940
MGP_PahariEiJ_G0014760	Elavl3	96	34.234	MGP_PahariEiJ_G0026757	Celf3	98	35.632
MGP_PahariEiJ_G0014760	Elavl3	65	36.207	MGP_PahariEiJ_G0025037	Rbms1	51	34.112
MGP_PahariEiJ_G0014760	Elavl3	65	37.500	MGP_PahariEiJ_G0030981	Cirbp	79	37.500
MGP_PahariEiJ_G0014760	Elavl3	100	81.111	MGP_PahariEiJ_G0028496	Elavl2	100	80.332
MGP_PahariEiJ_G0014760	Elavl3	78	38.272	MGP_PahariEiJ_G0031056	-	91	30.588
MGP_PahariEiJ_G0014760	Elavl3	72	33.708	MGP_PahariEiJ_G0031641	Rbmx	86	33.708
MGP_PahariEiJ_G0014760	Elavl3	84	41.975	MGP_PahariEiJ_G0015171	Celf6	57	42.308
MGP_PahariEiJ_G0014760	Elavl3	93	33.735	MGP_PahariEiJ_G0028765	Pabpc4	92	31.061
MGP_PahariEiJ_G0014760	Elavl3	91	36.145	MGP_PahariEiJ_G0026409	Pabpc4l	96	36.145
MGP_PahariEiJ_G0014760	Elavl3	65	37.931	MGP_PahariEiJ_G0015650	Rbms3	70	38.562
MGP_PahariEiJ_G0014760	Elavl3	93	36.145	MGP_PahariEiJ_G0019749	Pabpc1	58	37.500
MGP_PahariEiJ_G0014760	Elavl3	100	82.271	MGP_PahariEiJ_G0028622	Elavl4	98	81.994
MGP_PahariEiJ_G0014760	Elavl3	74	42.391	MGP_PahariEiJ_G0025385	Celf1	57	43.590
MGP_PahariEiJ_G0014760	Elavl3	92	68.308	MGP_PahariEiJ_G0021261	Elavl1	95	67.692
MGP_PahariEiJ_G0014760	Elavl3	91	37.179	MGP_PahariEiJ_G0022332	Tia1	98	31.169
MGP_PahariEiJ_G0014760	Elavl3	76	40.741	MGP_PahariEiJ_G0019221	Celf2	82	34.667
MGP_PahariEiJ_G0014760	Elavl3	73	39.506	MGP_PahariEiJ_G0018792	Celf4	67	39.744

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0014760	Elavl3	100	99.183	ENSG00000196361	ELAVL3	100	99.183	Homo_sapiens
MGP_PahariEiJ_G0014760	Elavl3	100	86.932	ENSAPOG00000017565	elavl3	98	85.795	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0014760	Elavl3	100	95.739	ENSAMEG00000010487	ELAVL3	100	95.082	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0014760	Elavl3	100	86.932	ENSACIG00000024190	elavl3	98	85.795	Amphilophus_citrinellus
MGP_PahariEiJ_G0014760	Elavl3	100	90.057	ENSAOCG00000005054	elavl3	98	88.920	Amphiprion_ocellaris
MGP_PahariEiJ_G0014760	Elavl3	100	90.057	ENSAPEG00000011145	elavl3	98	88.920	Amphiprion_percula
MGP_PahariEiJ_G0014760	Elavl3	100	86.932	ENSATEG00000020941	elavl3	99	85.795	Anabas_testudineus
MGP_PahariEiJ_G0014760	Elavl3	99	88.235	ENSACAG00000016958	ELAVL3	93	88.122	Anolis_carolinensis
MGP_PahariEiJ_G0014760	Elavl3	100	99.148	ENSANAG00000030798	ELAVL3	98	99.148	Aotus_nancymaae
MGP_PahariEiJ_G0014760	Elavl3	100	86.932	ENSACLG00000018260	elavl3	98	85.795	Astatotilapia_calliptera
MGP_PahariEiJ_G0014760	Elavl3	100	88.301	ENSAMXG00000040498	elavl3	100	87.193	Astyanax_mexicanus
MGP_PahariEiJ_G0014760	Elavl3	100	98.580	ENSBTAG00000014412	ELAVL3	100	96.730	Bos_taurus
MGP_PahariEiJ_G0014760	Elavl3	100	99.183	ENSCJAG00000005589	ELAVL3	100	99.183	Callithrix_jacchus
MGP_PahariEiJ_G0014760	Elavl3	100	98.910	ENSCAFG00000017350	ELAVL3	100	98.910	Canis_familiaris
MGP_PahariEiJ_G0014760	Elavl3	100	98.864	ENSCAFG00020004614	ELAVL3	100	96.748	Canis_lupus_dingo
MGP_PahariEiJ_G0014760	Elavl3	99	98.626	ENSCHIG00000003436	ELAVL3	100	98.626	Capra_hircus
MGP_PahariEiJ_G0014760	Elavl3	99	98.634	ENSTSYG00000036621	ELAVL3	100	98.634	Carlito_syrichta
MGP_PahariEiJ_G0014760	Elavl3	89	83.025	ENSCAPG00000017620	ELAVL3	99	83.025	Cavia_aperea
MGP_PahariEiJ_G0014760	Elavl3	89	83.025	ENSCPOG00000001793	ELAVL3	99	83.025	Cavia_porcellus
MGP_PahariEiJ_G0014760	Elavl3	100	99.183	ENSCCAG00000034350	ELAVL3	100	99.183	Cebus_capucinus
MGP_PahariEiJ_G0014760	Elavl3	100	99.183	ENSCATG00000044086	ELAVL3	100	99.183	Cercocebus_atys
MGP_PahariEiJ_G0014760	Elavl3	100	98.910	ENSCLAG00000016404	ELAVL3	100	98.910	Chinchilla_lanigera
MGP_PahariEiJ_G0014760	Elavl3	90	98.696	ENSCSAG00000006755	ELAVL3	100	98.696	Chlorocebus_sabaeus
MGP_PahariEiJ_G0014760	Elavl3	100	88.952	ENSCPBG00000023982	ELAVL3	98	87.819	Chrysemys_picta_bellii
MGP_PahariEiJ_G0014760	Elavl3	100	99.183	ENSCANG00000038728	ELAVL3	100	99.183	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0014760	Elavl3	100	99.728	ENSCGRG00001018927	Elavl3	100	99.728	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0014760	Elavl3	100	99.455	ENSCGRG00000007158	Elavl3	100	99.455	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0014760	Elavl3	100	86.648	ENSCSEG00000021095	elavl3	98	85.511	Cynoglossus_semilaevis
MGP_PahariEiJ_G0014760	Elavl3	100	90.057	ENSCVAG00000014060	elavl3	98	88.920	Cyprinodon_variegatus
MGP_PahariEiJ_G0014760	Elavl3	100	90.341	ENSDARG00000014420	elavl3	98	89.205	Danio_rerio
MGP_PahariEiJ_G0014760	Elavl3	99	98.352	ENSDORG00000002538	Elavl3	100	98.352	Dipodomys_ordii
MGP_PahariEiJ_G0014760	Elavl3	51	99.237	ENSETEG00000000164	-	57	99.237	Echinops_telfairi
MGP_PahariEiJ_G0014760	Elavl3	100	98.910	ENSEASG00005004561	ELAVL3	100	98.910	Equus_asinus_asinus
MGP_PahariEiJ_G0014760	Elavl3	100	98.864	ENSECAG00000020594	ELAVL3	100	98.098	Equus_caballus
MGP_PahariEiJ_G0014760	Elavl3	100	87.784	ENSELUG00000023043	elavl3	100	84.741	Esox_lucius
MGP_PahariEiJ_G0014760	Elavl3	100	98.910	ENSFCAG00000024763	ELAVL3	100	98.910	Felis_catus
MGP_PahariEiJ_G0014760	Elavl3	100	88.920	ENSFDAG00000008449	ELAVL3	100	87.466	Fukomys_damarensis
MGP_PahariEiJ_G0014760	Elavl3	100	86.932	ENSFHEG00000001675	elavl3	98	85.795	Fundulus_heteroclitus
MGP_PahariEiJ_G0014760	Elavl3	100	90.341	ENSGMOG00000003760	elavl3	98	89.205	Gadus_morhua
MGP_PahariEiJ_G0014760	Elavl3	63	74.803	ENSGALG00000047364	-	100	74.803	Gallus_gallus
MGP_PahariEiJ_G0014760	Elavl3	100	90.057	ENSGAFG00000016015	elavl3	97	88.920	Gambusia_affinis
MGP_PahariEiJ_G0014760	Elavl3	100	90.057	ENSGACG00000013839	elavl3	98	88.920	Gasterosteus_aculeatus
MGP_PahariEiJ_G0014760	Elavl3	97	89.754	ENSGAGG00000016141	ELAVL3	100	89.754	Gopherus_agassizii
MGP_PahariEiJ_G0014760	Elavl3	99	99.176	ENSGGOG00000008635	ELAVL3	100	99.176	Gorilla_gorilla
MGP_PahariEiJ_G0014760	Elavl3	100	87.216	ENSHBUG00000020978	elavl3	100	84.196	Haplochromis_burtoni
MGP_PahariEiJ_G0014760	Elavl3	100	99.183	ENSHGLG00000015199	ELAVL3	100	99.183	Heterocephalus_glaber_female
MGP_PahariEiJ_G0014760	Elavl3	86	70.432	ENSHGLG00000019379	-	97	70.432	Heterocephalus_glaber_female
MGP_PahariEiJ_G0014760	Elavl3	98	97.994	ENSHGLG00100011200	ELAVL3	100	97.994	Heterocephalus_glaber_male
MGP_PahariEiJ_G0014760	Elavl3	100	90.341	ENSHCOG00000015894	elavl3	100	87.193	Hippocampus_comes
MGP_PahariEiJ_G0014760	Elavl3	100	86.932	ENSIPUG00000013002	elavl3	97	85.795	Ictalurus_punctatus
MGP_PahariEiJ_G0014760	Elavl3	100	99.183	ENSSTOG00000021111	ELAVL3	100	99.183	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0014760	Elavl3	99	98.352	ENSJJAG00000023513	Elavl3	100	98.352	Jaculus_jaculus
MGP_PahariEiJ_G0014760	Elavl3	100	86.932	ENSKMAG00000017412	elavl3	98	85.795	Kryptolebias_marmoratus
MGP_PahariEiJ_G0014760	Elavl3	100	86.932	ENSLBEG00000008073	elavl3	97	85.795	Labrus_bergylta
MGP_PahariEiJ_G0014760	Elavl3	100	88.301	ENSLOCG00000007647	elavl3	100	87.193	Lepisosteus_oculatus
MGP_PahariEiJ_G0014760	Elavl3	99	98.093	ENSLAFG00000005013	ELAVL3	99	98.093	Loxodonta_africana
MGP_PahariEiJ_G0014760	Elavl3	100	99.183	ENSMFAG00000003692	ELAVL3	100	99.183	Macaca_fascicularis
MGP_PahariEiJ_G0014760	Elavl3	100	99.183	ENSMMUG00000020616	ELAVL3	100	99.183	Macaca_mulatta
MGP_PahariEiJ_G0014760	Elavl3	100	98.910	ENSMNEG00000043973	ELAVL3	100	98.910	Macaca_nemestrina
MGP_PahariEiJ_G0014760	Elavl3	90	91.632	ENSMLEG00000013976	ELAVL3	99	91.803	Mandrillus_leucophaeus
MGP_PahariEiJ_G0014760	Elavl3	100	86.932	ENSMAMG00000011697	elavl3	99	85.795	Mastacembelus_armatus
MGP_PahariEiJ_G0014760	Elavl3	100	90.057	ENSMZEG00005019053	elavl3	98	88.920	Maylandia_zebra
MGP_PahariEiJ_G0014760	Elavl3	99	99.725	ENSMAUG00000016478	Elavl3	100	99.725	Mesocricetus_auratus
MGP_PahariEiJ_G0014760	Elavl3	100	98.641	ENSMICG00000016528	ELAVL3	100	99.176	Microcebus_murinus
MGP_PahariEiJ_G0014760	Elavl3	100	99.728	ENSMOCG00000002046	Elavl3	100	99.728	Microtus_ochrogaster
MGP_PahariEiJ_G0014760	Elavl3	100	86.932	ENSMMOG00000012154	elavl3	97	85.795	Mola_mola
MGP_PahariEiJ_G0014760	Elavl3	100	92.045	ENSMODG00000006653	ELAVL3	91	92.045	Monodelphis_domestica
MGP_PahariEiJ_G0014760	Elavl3	100	90.057	ENSMALG00000016659	elavl3	98	88.920	Monopterus_albus
MGP_PahariEiJ_G0014760	Elavl3	100	99.728	MGP_CAROLIEiJ_G0031894	Elavl3	100	99.728	Mus_caroli
MGP_PahariEiJ_G0014760	Elavl3	100	99.728	ENSMUSG00000003410	Elavl3	100	99.728	Mus_musculus
MGP_PahariEiJ_G0014760	Elavl3	100	98.638	ENSMPUG00000005040	ELAVL3	100	98.638	Mustela_putorius_furo
MGP_PahariEiJ_G0014760	Elavl3	99	97.820	ENSMLUG00000016320	ELAVL3	99	97.820	Myotis_lucifugus
MGP_PahariEiJ_G0014760	Elavl3	100	99.183	ENSNGAG00000000968	Elavl3	100	99.183	Nannospalax_galili
MGP_PahariEiJ_G0014760	Elavl3	100	90.057	ENSNBRG00000010319	elavl3	98	88.920	Neolamprologus_brichardi
MGP_PahariEiJ_G0014760	Elavl3	99	93.681	ENSMEUG00000016706	ELAVL3	100	93.681	Notamacropus_eugenii
MGP_PahariEiJ_G0014760	Elavl3	93	98.347	ENSOPRG00000007373	ELAVL3	100	98.381	Ochotona_princeps
MGP_PahariEiJ_G0014760	Elavl3	100	99.183	ENSODEG00000015790	ELAVL3	100	99.183	Octodon_degus
MGP_PahariEiJ_G0014760	Elavl3	100	90.057	ENSONIG00000001538	elavl3	97	88.920	Oreochromis_niloticus
MGP_PahariEiJ_G0014760	Elavl3	88	91.700	ENSOANG00000015046	ELAVL3	98	90.119	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0014760	Elavl3	100	90.057	ENSORLG00000005379	elavl3	98	88.920	Oryzias_latipes
MGP_PahariEiJ_G0014760	Elavl3	100	90.057	ENSORLG00020004570	elavl3	98	88.920	Oryzias_latipes_hni
MGP_PahariEiJ_G0014760	Elavl3	100	90.057	ENSORLG00015000662	elavl3	98	88.920	Oryzias_latipes_hsok
MGP_PahariEiJ_G0014760	Elavl3	100	86.932	ENSOMEG00000023959	elavl3	98	85.795	Oryzias_melastigma
MGP_PahariEiJ_G0014760	Elavl3	100	99.183	ENSOGAG00000007072	ELAVL3	100	99.183	Otolemur_garnettii
MGP_PahariEiJ_G0014760	Elavl3	100	98.638	ENSOARG00000018464	ELAVL3	100	98.638	Ovis_aries
MGP_PahariEiJ_G0014760	Elavl3	100	99.183	ENSPPAG00000033972	ELAVL3	100	99.183	Pan_paniscus
MGP_PahariEiJ_G0014760	Elavl3	100	98.910	ENSPPRG00000005151	ELAVL3	100	98.910	Panthera_pardus
MGP_PahariEiJ_G0014760	Elavl3	98	94.294	ENSPTIG00000013610	ELAVL3	97	94.767	Panthera_tigris_altaica
MGP_PahariEiJ_G0014760	Elavl3	100	99.183	ENSPTRG00000010506	ELAVL3	100	99.183	Pan_troglodytes
MGP_PahariEiJ_G0014760	Elavl3	100	99.183	ENSPANG00000005849	ELAVL3	100	99.183	Papio_anubis
MGP_PahariEiJ_G0014760	Elavl3	100	90.341	ENSPKIG00000016207	elavl3	98	89.205	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0014760	Elavl3	100	86.932	ENSPMGG00000002016	elavl3	98	85.795	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0014760	Elavl3	100	85.405	ENSPFOG00000007754	elavl3	100	84.324	Poecilia_formosa
MGP_PahariEiJ_G0014760	Elavl3	100	86.932	ENSPLAG00000001547	elavl3	99	85.795	Poecilia_latipinna
MGP_PahariEiJ_G0014760	Elavl3	100	86.932	ENSPMEG00000010156	elavl3	99	85.795	Poecilia_mexicana
MGP_PahariEiJ_G0014760	Elavl3	100	90.057	ENSPREG00000006971	elavl3	98	88.920	Poecilia_reticulata
MGP_PahariEiJ_G0014760	Elavl3	84	85.366	ENSPPYG00000009583	-	98	85.366	Pongo_abelii
MGP_PahariEiJ_G0014760	Elavl3	83	100.000	ENSPCAG00000015952	ELAVL3	65	100.000	Procavia_capensis
MGP_PahariEiJ_G0014760	Elavl3	100	99.183	ENSPCOG00000023781	ELAVL3	100	99.183	Propithecus_coquereli
MGP_PahariEiJ_G0014760	Elavl3	100	98.910	ENSPVAG00000014893	ELAVL3	100	98.910	Pteropus_vampyrus
MGP_PahariEiJ_G0014760	Elavl3	100	86.932	ENSPNYG00000013186	elavl3	96	85.795	Pundamilia_nyererei
MGP_PahariEiJ_G0014760	Elavl3	100	88.301	ENSPNAG00000003633	elavl3	100	87.193	Pygocentrus_nattereri
MGP_PahariEiJ_G0014760	Elavl3	100	99.728	ENSRNOG00000013752	Elavl3	100	99.728	Rattus_norvegicus
MGP_PahariEiJ_G0014760	Elavl3	100	99.183	ENSRBIG00000034762	ELAVL3	100	99.183	Rhinopithecus_bieti
MGP_PahariEiJ_G0014760	Elavl3	89	94.000	ENSRROG00000034305	ELAVL3	100	100.000	Rhinopithecus_roxellana
MGP_PahariEiJ_G0014760	Elavl3	99	99.176	ENSSBOG00000030047	ELAVL3	100	99.176	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0014760	Elavl3	90	93.913	ENSSHAG00000005583	ELAVL3	100	93.913	Sarcophilus_harrisii
MGP_PahariEiJ_G0014760	Elavl3	94	90.060	ENSSFOG00015023630	elavl3	98	88.855	Scleropages_formosus
MGP_PahariEiJ_G0014760	Elavl3	100	86.648	ENSSMAG00000004671	elavl3	99	85.511	Scophthalmus_maximus
MGP_PahariEiJ_G0014760	Elavl3	100	86.932	ENSSDUG00000020708	elavl3	98	85.795	Seriola_dumerili
MGP_PahariEiJ_G0014760	Elavl3	100	88.301	ENSSLDG00000013769	elavl3	100	86.921	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0014760	Elavl3	99	89.041	ENSSARG00000005949	ELAVL3	100	89.041	Sorex_araneus
MGP_PahariEiJ_G0014760	Elavl3	100	86.932	ENSSPAG00000000990	elavl3	98	85.795	Stegastes_partitus
MGP_PahariEiJ_G0014760	Elavl3	100	98.910	ENSSSCG00000013617	ELAVL3	100	98.910	Sus_scrofa
MGP_PahariEiJ_G0014760	Elavl3	100	86.932	ENSTRUG00000010719	elavl3	99	85.795	Takifugu_rubripes
MGP_PahariEiJ_G0014760	Elavl3	100	89.296	ENSTNIG00000018572	elavl3	98	88.169	Tetraodon_nigroviridis
MGP_PahariEiJ_G0014760	Elavl3	97	93.884	ENSTBEG00000006133	ELAVL3	100	93.884	Tupaia_belangeri
MGP_PahariEiJ_G0014760	Elavl3	100	98.638	ENSTTRG00000001789	ELAVL3	100	98.638	Tursiops_truncatus
MGP_PahariEiJ_G0014760	Elavl3	100	95.739	ENSUAMG00000000405	ELAVL3	98	95.330	Ursus_americanus
MGP_PahariEiJ_G0014760	Elavl3	98	93.878	ENSUMAG00000019546	ELAVL3	88	93.811	Ursus_maritimus
MGP_PahariEiJ_G0014760	Elavl3	100	98.864	ENSVVUG00000023733	ELAVL3	100	97.003	Vulpes_vulpes
MGP_PahariEiJ_G0014760	Elavl3	100	85.912	ENSXETG00000016741	elavl3	99	85.286	Xenopus_tropicalis
MGP_PahariEiJ_G0014760	Elavl3	100	86.932	ENSXMAG00000018287	elavl3	98	85.795	Xiphophorus_maculatus