EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0015078 (Gene tree)
Gene ID: 110327402
Gene Symbol: Zc3h12c
Alias: C230027N18Rik
Full Name: zinc finger CCCH-type containing 12C
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 54466 bases
Position: chr10:47154679-47209144
Accession: 110327402
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0023509	RNase_Zc3h12a	PF11977.8	6.3e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0023510	-	2655	-	MGP_PahariEiJ_P0023510	884 (aa)	-	-
MGP_PahariEiJ_T0023509	-	6307	-	MGP_PahariEiJ_P0023509	903 (aa)	XP_021062021	UPI000A3089A8

Gene Model

Click here to download MGP_PahariEiJ_G0015078's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0015078's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0015078	Zc3h12c	93	51.986	MGP_PahariEiJ_G0031787	Zc3h12b	99	51.986
MGP_PahariEiJ_G0015078	Zc3h12c	50	57.178	MGP_PahariEiJ_G0028793	Zc3h12a	70	57.178

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0015078	Zc3h12c	99	91.334	ENSG00000149289	ZC3H12C	100	91.549	Homo_sapiens
MGP_PahariEiJ_G0015078	Zc3h12c	99	91.324	ENSAMEG00000009188	ZC3H12C	99	91.324	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0015078	Zc3h12c	71	88.320	ENSAPLG00000002854	ZC3H12C	100	88.320	Anas_platyrhynchos
MGP_PahariEiJ_G0015078	Zc3h12c	99	81.130	ENSACAG00000001031	ZC3H12C	98	81.130	Anolis_carolinensis
MGP_PahariEiJ_G0015078	Zc3h12c	99	91.790	ENSANAG00000026999	ZC3H12C	99	91.790	Aotus_nancymaae
MGP_PahariEiJ_G0015078	Zc3h12c	100	89.718	ENSBTAG00000008732	ZC3H12C	100	89.718	Bos_taurus
MGP_PahariEiJ_G0015078	Zc3h12c	99	91.448	ENSCJAG00000010319	ZC3H12C	99	91.448	Callithrix_jacchus
MGP_PahariEiJ_G0015078	Zc3h12c	99	88.141	ENSCAFG00000014297	ZC3H12C	99	88.141	Canis_familiaris
MGP_PahariEiJ_G0015078	Zc3h12c	99	88.141	ENSCAFG00020006999	ZC3H12C	99	88.141	Canis_lupus_dingo
MGP_PahariEiJ_G0015078	Zc3h12c	100	90.056	ENSCHIG00000021221	ZC3H12C	100	90.056	Capra_hircus
MGP_PahariEiJ_G0015078	Zc3h12c	91	90.505	ENSTSYG00000005412	ZC3H12C	99	90.505	Carlito_syrichta
MGP_PahariEiJ_G0015078	Zc3h12c	99	88.383	ENSCAPG00000011610	ZC3H12C	99	88.584	Cavia_aperea
MGP_PahariEiJ_G0015078	Zc3h12c	99	88.470	ENSCPOG00000032962	ZC3H12C	99	88.470	Cavia_porcellus
MGP_PahariEiJ_G0015078	Zc3h12c	100	91.742	ENSCCAG00000022395	ZC3H12C	100	92.019	Cebus_capucinus
MGP_PahariEiJ_G0015078	Zc3h12c	100	91.176	ENSCATG00000041641	ZC3H12C	100	91.176	Cercocebus_atys
MGP_PahariEiJ_G0015078	Zc3h12c	99	91.438	ENSCLAG00000012577	ZC3H12C	100	91.667	Chinchilla_lanigera
MGP_PahariEiJ_G0015078	Zc3h12c	100	90.724	ENSCSAG00000002945	ZC3H12C	100	90.724	Chlorocebus_sabaeus
MGP_PahariEiJ_G0015078	Zc3h12c	99	84.528	ENSCHOG00000013202	-	100	84.615	Choloepus_hoffmanni
MGP_PahariEiJ_G0015078	Zc3h12c	99	82.899	ENSCPBG00000021043	ZC3H12C	100	83.528	Chrysemys_picta_bellii
MGP_PahariEiJ_G0015078	Zc3h12c	99	91.096	ENSCANG00000040994	ZC3H12C	99	91.096	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0015078	Zc3h12c	100	94.910	ENSCGRG00001013672	Zc3h12c	100	94.910	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0015078	Zc3h12c	99	94.863	ENSCGRG00000001308	Zc3h12c	100	94.789	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0015078	Zc3h12c	99	88.724	ENSDNOG00000013040	ZC3H12C	99	88.724	Dasypus_novemcinctus
MGP_PahariEiJ_G0015078	Zc3h12c	99	90.411	ENSDORG00000009134	Zc3h12c	99	90.411	Dipodomys_ordii
MGP_PahariEiJ_G0015078	Zc3h12c	71	94.720	ENSETEG00000008027	ZC3H12C	100	94.720	Echinops_telfairi
MGP_PahariEiJ_G0015078	Zc3h12c	100	91.403	ENSEASG00005010098	ZC3H12C	100	91.403	Equus_asinus_asinus
MGP_PahariEiJ_G0015078	Zc3h12c	99	91.334	ENSECAG00000000462	ZC3H12C	100	91.549	Equus_caballus
MGP_PahariEiJ_G0015078	Zc3h12c	64	90.351	ENSEEUG00000005709	-	99	90.351	Erinaceus_europaeus
MGP_PahariEiJ_G0015078	Zc3h12c	99	89.624	ENSFCAG00000010665	ZC3H12C	99	89.624	Felis_catus
MGP_PahariEiJ_G0015078	Zc3h12c	99	82.506	ENSFALG00000008776	ZC3H12C	99	82.559	Ficedula_albicollis
MGP_PahariEiJ_G0015078	Zc3h12c	99	91.781	ENSFDAG00000017997	ZC3H12C	100	92.254	Fukomys_damarensis
MGP_PahariEiJ_G0015078	Zc3h12c	96	82.964	ENSGALG00000017154	ZC3H12C	100	82.964	Gallus_gallus
MGP_PahariEiJ_G0015078	Zc3h12c	95	82.024	ENSGAGG00000024154	ZC3H12C	86	82.395	Gopherus_agassizii
MGP_PahariEiJ_G0015078	Zc3h12c	99	91.220	ENSGGOG00000010117	ZC3H12C	99	91.220	Gorilla_gorilla
MGP_PahariEiJ_G0015078	Zc3h12c	100	91.742	ENSHGLG00000019021	ZC3H12C	100	91.742	Heterocephalus_glaber_female
MGP_PahariEiJ_G0015078	Zc3h12c	100	91.742	ENSHGLG00100007295	ZC3H12C	100	91.742	Heterocephalus_glaber_male
MGP_PahariEiJ_G0015078	Zc3h12c	100	93.245	ENSSTOG00000022143	ZC3H12C	100	94.064	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0015078	Zc3h12c	99	93.265	ENSJJAG00000001147	Zc3h12c	100	93.265	Jaculus_jaculus
MGP_PahariEiJ_G0015078	Zc3h12c	99	73.962	ENSLACG00000009305	ZC3H12C	99	73.962	Latimeria_chalumnae
MGP_PahariEiJ_G0015078	Zc3h12c	71	94.577	ENSLAFG00000016296	ZC3H12C	100	94.577	Loxodonta_africana
MGP_PahariEiJ_G0015078	Zc3h12c	100	91.176	ENSMFAG00000042068	ZC3H12C	100	91.176	Macaca_fascicularis
MGP_PahariEiJ_G0015078	Zc3h12c	99	91.334	ENSMMUG00000048435	ZC3H12C	99	91.334	Macaca_mulatta
MGP_PahariEiJ_G0015078	Zc3h12c	100	91.176	ENSMNEG00000032663	ZC3H12C	100	91.549	Macaca_nemestrina
MGP_PahariEiJ_G0015078	Zc3h12c	99	91.220	ENSMLEG00000032083	ZC3H12C	99	91.220	Mandrillus_leucophaeus
MGP_PahariEiJ_G0015078	Zc3h12c	99	81.653	ENSMGAG00000015143	ZC3H12C	99	81.653	Meleagris_gallopavo
MGP_PahariEiJ_G0015078	Zc3h12c	100	93.695	ENSMAUG00000020412	Zc3h12c	100	93.695	Mesocricetus_auratus
MGP_PahariEiJ_G0015078	Zc3h12c	100	92.534	ENSMICG00000011455	ZC3H12C	100	93.075	Microcebus_murinus
MGP_PahariEiJ_G0015078	Zc3h12c	100	95.017	ENSMOCG00000020090	Zc3h12c	100	95.017	Microtus_ochrogaster
MGP_PahariEiJ_G0015078	Zc3h12c	96	86.916	ENSMODG00000014555	ZC3H12C	100	86.916	Monodelphis_domestica
MGP_PahariEiJ_G0015078	Zc3h12c	100	97.172	MGP_CAROLIEiJ_G0032210	Zc3h12c	100	97.172	Mus_caroli
MGP_PahariEiJ_G0015078	Zc3h12c	100	97.398	ENSMUSG00000035164	Zc3h12c	100	97.398	Mus_musculus
MGP_PahariEiJ_G0015078	Zc3h12c	100	97.172	MGP_SPRETEiJ_G0033350	Zc3h12c	100	97.172	Mus_spretus
MGP_PahariEiJ_G0015078	Zc3h12c	100	85.936	ENSMPUG00000005888	ZC3H12C	100	85.936	Mustela_putorius_furo
MGP_PahariEiJ_G0015078	Zc3h12c	99	90.753	ENSMLUG00000017189	ZC3H12C	100	90.753	Myotis_lucifugus
MGP_PahariEiJ_G0015078	Zc3h12c	100	92.580	ENSNGAG00000023957	Zc3h12c	100	92.580	Nannospalax_galili
MGP_PahariEiJ_G0015078	Zc3h12c	99	91.562	ENSNLEG00000029829	ZC3H12C	99	91.562	Nomascus_leucogenys
MGP_PahariEiJ_G0015078	Zc3h12c	99	83.390	ENSMEUG00000015398	ZC3H12C	100	83.390	Notamacropus_eugenii
MGP_PahariEiJ_G0015078	Zc3h12c	74	81.106	ENSOPRG00000003370	-	98	81.106	Ochotona_princeps
MGP_PahariEiJ_G0015078	Zc3h12c	99	89.180	ENSODEG00000011026	ZC3H12C	100	89.180	Octodon_degus
MGP_PahariEiJ_G0015078	Zc3h12c	71	84.968	ENSOANG00000006242	-	99	84.968	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0015078	Zc3h12c	99	91.676	ENSOCUG00000005283	ZC3H12C	99	91.676	Oryctolagus_cuniculus
MGP_PahariEiJ_G0015078	Zc3h12c	99	91.448	ENSOGAG00000013223	ZC3H12C	99	91.448	Otolemur_garnettii
MGP_PahariEiJ_G0015078	Zc3h12c	99	85.763	ENSOARG00000012999	ZC3H12C	97	91.176	Ovis_aries
MGP_PahariEiJ_G0015078	Zc3h12c	99	91.562	ENSPPAG00000041914	ZC3H12C	99	91.562	Pan_paniscus
MGP_PahariEiJ_G0015078	Zc3h12c	99	89.396	ENSPPRG00000006582	ZC3H12C	99	89.396	Panthera_pardus
MGP_PahariEiJ_G0015078	Zc3h12c	86	86.916	ENSPTIG00000009995	ZC3H12C	99	86.916	Panthera_tigris_altaica
MGP_PahariEiJ_G0015078	Zc3h12c	99	91.562	ENSPTRG00000050494	ZC3H12C	99	91.562	Pan_troglodytes
MGP_PahariEiJ_G0015078	Zc3h12c	100	91.176	ENSPANG00000023930	ZC3H12C	100	91.176	Papio_anubis
MGP_PahariEiJ_G0015078	Zc3h12c	96	82.060	ENSPSIG00000005959	ZC3H12C	100	82.523	Pelodiscus_sinensis
MGP_PahariEiJ_G0015078	Zc3h12c	100	86.532	ENSPEMG00000008502	Zc3h12c	100	95.484	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0015078	Zc3h12c	96	87.033	ENSPCIG00000022169	ZC3H12C	100	87.033	Phascolarctos_cinereus
MGP_PahariEiJ_G0015078	Zc3h12c	96	91.549	ENSPPYG00000003851	ZC3H12C	100	91.549	Pongo_abelii
MGP_PahariEiJ_G0015078	Zc3h12c	64	93.860	ENSPCAG00000015682	ZC3H12C	100	93.860	Procavia_capensis
MGP_PahariEiJ_G0015078	Zc3h12c	99	92.816	ENSPCOG00000024737	ZC3H12C	99	92.816	Propithecus_coquereli
MGP_PahariEiJ_G0015078	Zc3h12c	99	89.773	ENSPVAG00000014329	ZC3H12C	99	89.773	Pteropus_vampyrus
MGP_PahariEiJ_G0015078	Zc3h12c	100	95.814	ENSRNOG00000012470	Zc3h12c	100	95.814	Rattus_norvegicus
MGP_PahariEiJ_G0015078	Zc3h12c	99	91.210	ENSRBIG00000040441	ZC3H12C	100	91.315	Rhinopithecus_bieti
MGP_PahariEiJ_G0015078	Zc3h12c	99	91.210	ENSRROG00000004335	ZC3H12C	99	91.210	Rhinopithecus_roxellana
MGP_PahariEiJ_G0015078	Zc3h12c	99	92.018	ENSSBOG00000025582	ZC3H12C	100	92.136	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0015078	Zc3h12c	99	83.882	ENSSHAG00000005597	ZC3H12C	100	86.565	Sarcophilus_harrisii
MGP_PahariEiJ_G0015078	Zc3h12c	71	94.896	ENSSARG00000003433	ZC3H12C	100	94.896	Sorex_araneus
MGP_PahariEiJ_G0015078	Zc3h12c	99	83.750	ENSSPUG00000001832	ZC3H12C	99	83.750	Sphenodon_punctatus
MGP_PahariEiJ_G0015078	Zc3h12c	100	91.412	ENSSSCG00000015014	ZC3H12C	100	91.794	Sus_scrofa
MGP_PahariEiJ_G0015078	Zc3h12c	72	86.875	ENSTGUG00000011244	ZC3H12C	100	86.875	Taeniopygia_guttata
MGP_PahariEiJ_G0015078	Zc3h12c	99	91.781	ENSTTRG00000005096	ZC3H12C	100	91.781	Tursiops_truncatus
MGP_PahariEiJ_G0015078	Zc3h12c	99	91.781	ENSUAMG00000006051	ZC3H12C	99	91.792	Ursus_americanus
MGP_PahariEiJ_G0015078	Zc3h12c	99	91.354	ENSUMAG00000007283	ZC3H12C	99	91.562	Ursus_maritimus
MGP_PahariEiJ_G0015078	Zc3h12c	88	90.400	ENSVPAG00000003110	ZC3H12C	88	90.400	Vicugna_pacos
MGP_PahariEiJ_G0015078	Zc3h12c	99	69.179	ENSXETG00000033837	ZC3H12C	99	69.863	Xenopus_tropicalis