EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_PahariEiJ_G0015146 (Gene tree)
Gene ID
110328036
Gene Symbol
Edc3
Alias
Lsm16|Yjdc
Full Name
enhancer of mRNA decapping 3
Gene Type
protein_coding
Species
Mus_pahari
Status
putative
Strand
Plus strand
Length
46058 bases
Position
chr10:52601506-52647563
Accession
110328036
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_PahariEiJ_P0023698FDFPF09532.101.5e-1711
MGP_PahariEiJ_P0023700LSM14PF12701.73.8e-1111
MGP_PahariEiJ_P0023698LSM14PF12701.71.2e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_PahariEiJ_T0023699-4305-MGP_PahariEiJ_P002369957 (aa)-UPI0001889E09
MGP_PahariEiJ_T0023698-5737-MGP_PahariEiJ_P0023698508 (aa)XP_021063044UPI000A30C6B9
MGP_PahariEiJ_T0023700-444-MGP_PahariEiJ_P002370065 (aa)-UPI0001889E0A
Gene Model
Click here to download MGP_PahariEiJ_G0015146's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0015146's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_PahariEiJ_G0015146Edc310098.462ENSG00000179151EDC310098.246Homo_sapiens
MGP_PahariEiJ_G0015146Edc310080.000ENSAPOG00000010791edc310068.959Acanthochromis_polyacanthus
MGP_PahariEiJ_G0015146Edc310073.846ENSAPOG00000008655EDC310055.922Acanthochromis_polyacanthus
MGP_PahariEiJ_G0015146Edc310096.923ENSAMEG00000008963EDC310095.669Ailuropoda_melanoleuca
MGP_PahariEiJ_G0015146Edc310072.308ENSACIG00000005330EDC39959.922Amphilophus_citrinellus
MGP_PahariEiJ_G0015146Edc310078.947ENSACIG00000017751edc310068.566Amphilophus_citrinellus
MGP_PahariEiJ_G0015146Edc310080.000ENSAOCG00000005431edc310069.155Amphiprion_ocellaris
MGP_PahariEiJ_G0015146Edc310076.923ENSAOCG00000009103-10057.364Amphiprion_ocellaris
MGP_PahariEiJ_G0015146Edc310076.923ENSAPEG00000007841EDC310057.364Amphiprion_percula
MGP_PahariEiJ_G0015146Edc310080.000ENSAPEG00000000968edc310069.155Amphiprion_percula
MGP_PahariEiJ_G0015146Edc310080.000ENSATEG00000015505edc310070.334Anabas_testudineus
MGP_PahariEiJ_G0015146Edc310075.385ENSATEG00000004205-10058.077Anabas_testudineus
MGP_PahariEiJ_G0015146Edc39087.033ENSAPLG00000008957EDC310086.374Anas_platyrhynchos
MGP_PahariEiJ_G0015146Edc310092.308ENSACAG00000000460-10086.902Anolis_carolinensis
MGP_PahariEiJ_G0015146Edc310098.462ENSANAG00000024078EDC310096.457Aotus_nancymaae
MGP_PahariEiJ_G0015146Edc310078.947ENSACLG00000007232edc310068.173Astatotilapia_calliptera
MGP_PahariEiJ_G0015146Edc310072.308ENSACLG00000018776-9958.398Astatotilapia_calliptera
MGP_PahariEiJ_G0015146Edc310080.000ENSAMXG00000001589edc310070.980Astyanax_mexicanus
MGP_PahariEiJ_G0015146Edc310098.462ENSBTAG00000007308EDC310095.276Bos_taurus
MGP_PahariEiJ_G0015146Edc310098.462ENSCJAG00000017681EDC310096.457Callithrix_jacchus
MGP_PahariEiJ_G0015146Edc310098.462ENSCAFG00000017935EDC310095.276Canis_familiaris
MGP_PahariEiJ_G0015146Edc310098.462ENSCAFG00020003909EDC310095.276Canis_lupus_dingo
MGP_PahariEiJ_G0015146Edc310098.462ENSCHIG00000023658EDC310095.866Capra_hircus
MGP_PahariEiJ_G0015146Edc310098.462ENSTSYG00000004822EDC310095.866Carlito_syrichta
MGP_PahariEiJ_G0015146Edc39698.182ENSCAPG00000000377-10098.182Cavia_aperea
MGP_PahariEiJ_G0015146Edc310098.462ENSCPOG00000015595EDC310094.685Cavia_porcellus
MGP_PahariEiJ_G0015146Edc310098.462ENSCCAG00000021663EDC310096.654Cebus_capucinus
MGP_PahariEiJ_G0015146Edc310098.462ENSCATG00000037511EDC310096.654Cercocebus_atys
MGP_PahariEiJ_G0015146Edc310098.462ENSCLAG00000005700EDC310095.079Chinchilla_lanigera
MGP_PahariEiJ_G0015146Edc310098.462ENSCSAG00000014239EDC310096.654Chlorocebus_sabaeus
MGP_PahariEiJ_G0015146Edc310096.923ENSCPBG00000024239EDC310088.780Chrysemys_picta_bellii
MGP_PahariEiJ_G0015146Edc310038.077ENSCING00000022142-9937.885Ciona_intestinalis
MGP_PahariEiJ_G0015146Edc310098.462ENSCANG00000028699EDC310096.654Colobus_angolensis_palliatus
MGP_PahariEiJ_G0015146Edc3100100.000ENSCGRG00001013874Edc310098.425Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0015146Edc3100100.000ENSCGRG00000011885Edc310098.425Cricetulus_griseus_crigri
MGP_PahariEiJ_G0015146Edc310080.000ENSCSEG00000012996edc39968.701Cynoglossus_semilaevis
MGP_PahariEiJ_G0015146Edc310078.462ENSCVAG00000008023edc310068.566Cyprinodon_variegatus
MGP_PahariEiJ_G0015146Edc310072.308ENSDARG00000051931edc39968.431Danio_rerio
MGP_PahariEiJ_G0015146Edc310098.462ENSDNOG00000030661EDC310083.915Dasypus_novemcinctus
MGP_PahariEiJ_G0015146Edc39698.182ENSDORG00000025261-10098.182Dipodomys_ordii
MGP_PahariEiJ_G0015146Edc39596.296ENSETEG00000002398-6496.296Echinops_telfairi
MGP_PahariEiJ_G0015146Edc310098.462ENSEASG00005005071EDC310096.457Equus_asinus_asinus
MGP_PahariEiJ_G0015146Edc310098.462ENSECAG00000017994EDC310096.457Equus_caballus
MGP_PahariEiJ_G0015146Edc310073.846ENSELUG00000007607EDC310062.035Esox_lucius
MGP_PahariEiJ_G0015146Edc310078.462ENSELUG00000005794edc310065.497Esox_lucius
MGP_PahariEiJ_G0015146Edc310096.923ENSFCAG00000002014EDC310095.472Felis_catus
MGP_PahariEiJ_G0015146Edc310096.923ENSFALG00000004543EDC39684.569Ficedula_albicollis
MGP_PahariEiJ_G0015146Edc310098.462ENSFDAG00000012582EDC310094.685Fukomys_damarensis
MGP_PahariEiJ_G0015146Edc310078.462ENSFHEG00000009375edc310068.959Fundulus_heteroclitus
MGP_PahariEiJ_G0015146Edc310080.000ENSGMOG00000002715edc310067.188Gadus_morhua
MGP_PahariEiJ_G0015146Edc310096.923ENSGALG00000040181EDC310087.992Gallus_gallus
MGP_PahariEiJ_G0015146Edc310078.462ENSGAFG00000014433edc310067.780Gambusia_affinis
MGP_PahariEiJ_G0015146Edc310070.769ENSGACG00000014671EDC39956.140Gasterosteus_aculeatus
MGP_PahariEiJ_G0015146Edc310076.923ENSGACG00000009783edc310068.173Gasterosteus_aculeatus
MGP_PahariEiJ_G0015146Edc310096.923ENSGAGG00000023477EDC310087.795Gopherus_agassizii
MGP_PahariEiJ_G0015146Edc310098.462ENSGGOG00000003552EDC310096.260Gorilla_gorilla
MGP_PahariEiJ_G0015146Edc310078.947ENSHBUG00000003635edc310068.173Haplochromis_burtoni
MGP_PahariEiJ_G0015146Edc310072.308ENSHBUG00000020817EDC39958.398Haplochromis_burtoni
MGP_PahariEiJ_G0015146Edc39698.182ENSHGLG00000020876-10098.182Heterocephalus_glaber_female
MGP_PahariEiJ_G0015146Edc39696.364ENSHGLG00100019573-10096.364Heterocephalus_glaber_male
MGP_PahariEiJ_G0015146Edc310077.193ENSHCOG00000016834edc310067.710Hippocampus_comes
MGP_PahariEiJ_G0015146Edc310076.923ENSIPUG00000005695edc310069.745Ictalurus_punctatus
MGP_PahariEiJ_G0015146Edc310098.462ENSSTOG00000013936EDC310096.457Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0015146Edc310089.474ENSJJAG00000012800-9184.375Jaculus_jaculus
MGP_PahariEiJ_G0015146Edc310095.669ENSJJAG00000008074Edc310095.669Jaculus_jaculus
MGP_PahariEiJ_G0015146Edc310080.000ENSKMAG00000001243edc310068.762Kryptolebias_marmoratus
MGP_PahariEiJ_G0015146Edc310072.308ENSKMAG00000001987EDC310056.102Kryptolebias_marmoratus
MGP_PahariEiJ_G0015146Edc310078.462ENSLBEG00000013435edc39968.173Labrus_bergylta
MGP_PahariEiJ_G0015146Edc310072.308ENSLBEG00000017984EDC310057.087Labrus_bergylta
MGP_PahariEiJ_G0015146Edc310077.476ENSLACG00000014149EDC310077.476Latimeria_chalumnae
MGP_PahariEiJ_G0015146Edc310078.462ENSLOCG00000014625edc39967.641Lepisosteus_oculatus
MGP_PahariEiJ_G0015146Edc310096.923ENSLAFG00000002992EDC310093.898Loxodonta_africana
MGP_PahariEiJ_G0015146Edc310098.462ENSMFAG00000043074EDC310096.457Macaca_fascicularis
MGP_PahariEiJ_G0015146Edc310098.462ENSMMUG00000011071EDC310096.457Macaca_mulatta
MGP_PahariEiJ_G0015146Edc310098.462ENSMNEG00000035316EDC310096.457Macaca_nemestrina
MGP_PahariEiJ_G0015146Edc310098.462ENSMLEG00000030372EDC310096.654Mandrillus_leucophaeus
MGP_PahariEiJ_G0015146Edc310067.692ENSMAMG00000005423-9956.836Mastacembelus_armatus
MGP_PahariEiJ_G0015146Edc310080.000ENSMAMG00000000505edc310069.352Mastacembelus_armatus
MGP_PahariEiJ_G0015146Edc310078.947ENSMZEG00005004892edc310068.173Maylandia_zebra
MGP_PahariEiJ_G0015146Edc310072.308ENSMZEG00005005654EDC39959.180Maylandia_zebra
MGP_PahariEiJ_G0015146Edc310096.923ENSMGAG00000002617EDC310087.205Meleagris_gallopavo
MGP_PahariEiJ_G0015146Edc310096.923ENSMICG00000043190EDC310095.866Microcebus_murinus
MGP_PahariEiJ_G0015146Edc310098.462ENSMOCG00000016205Edc310098.228Microtus_ochrogaster
MGP_PahariEiJ_G0015146Edc310078.462ENSMMOG00000012278edc39968.307Mola_mola
MGP_PahariEiJ_G0015146Edc310096.923ENSMODG00000009442EDC310091.929Monodelphis_domestica
MGP_PahariEiJ_G0015146Edc310078.462ENSMALG00000008658edc310069.745Monopterus_albus
MGP_PahariEiJ_G0015146Edc3100100.000MGP_CAROLIEiJ_G0032280Edc3100100.000Mus_caroli
MGP_PahariEiJ_G0015146Edc3100100.000ENSMUSG00000038957Edc3100100.000Mus_musculus
MGP_PahariEiJ_G0015146Edc3100100.000MGP_SPRETEiJ_G0033420Edc3100100.000Mus_spretus
MGP_PahariEiJ_G0015146Edc310096.923ENSMPUG00000017293EDC310094.882Mustela_putorius_furo
MGP_PahariEiJ_G0015146Edc310096.923ENSMLUG00000016382EDC310095.294Myotis_lucifugus
MGP_PahariEiJ_G0015146Edc3100100.000ENSNGAG00000010923Edc310096.850Nannospalax_galili
MGP_PahariEiJ_G0015146Edc310072.308ENSNBRG00000007881EDC39958.594Neolamprologus_brichardi
MGP_PahariEiJ_G0015146Edc310078.947ENSNBRG00000002434edc310067.976Neolamprologus_brichardi
MGP_PahariEiJ_G0015146Edc310098.462ENSNLEG00000014577EDC310086.614Nomascus_leucogenys
MGP_PahariEiJ_G0015146Edc310096.923ENSMEUG00000009077EDC310090.157Notamacropus_eugenii
MGP_PahariEiJ_G0015146Edc39594.444ENSOPRG00000009540-7994.444Ochotona_princeps
MGP_PahariEiJ_G0015146Edc39698.182ENSODEG00000020214-10098.182Octodon_degus
MGP_PahariEiJ_G0015146Edc310072.308ENSONIG00000002932-9959.454Oreochromis_niloticus
MGP_PahariEiJ_G0015146Edc310078.947ENSONIG00000008434edc310068.369Oreochromis_niloticus
MGP_PahariEiJ_G0015146Edc310098.462ENSOANG00000030799-9579.739Ornithorhynchus_anatinus
MGP_PahariEiJ_G0015146Edc310095.385ENSOCUG00000017740EDC38691.436Oryctolagus_cuniculus
MGP_PahariEiJ_G0015146Edc310076.923ENSORLG00000004883edc310067.780Oryzias_latipes
MGP_PahariEiJ_G0015146Edc310070.769ENSORLG00000014399-9856.055Oryzias_latipes
MGP_PahariEiJ_G0015146Edc310070.769ENSORLG00020019446-10056.055Oryzias_latipes_hni
MGP_PahariEiJ_G0015146Edc310076.923ENSORLG00020012262edc310067.583Oryzias_latipes_hni
MGP_PahariEiJ_G0015146Edc310076.923ENSORLG00015005634edc310067.780Oryzias_latipes_hsok
MGP_PahariEiJ_G0015146Edc310072.308ENSORLG00015017635-9656.055Oryzias_latipes_hsok
MGP_PahariEiJ_G0015146Edc310076.923ENSOMEG00000014026edc310068.173Oryzias_melastigma
MGP_PahariEiJ_G0015146Edc310070.769ENSOMEG00000017354EDC310055.469Oryzias_melastigma
MGP_PahariEiJ_G0015146Edc310098.462ENSOGAG00000014441EDC310096.654Otolemur_garnettii
MGP_PahariEiJ_G0015146Edc310098.462ENSOARG00000003476EDC310095.481Ovis_aries
MGP_PahariEiJ_G0015146Edc310098.462ENSPPAG00000040143EDC310096.260Pan_paniscus
MGP_PahariEiJ_G0015146Edc310096.923ENSPPRG00000006257EDC310095.276Panthera_pardus
MGP_PahariEiJ_G0015146Edc310096.923ENSPTIG00000017424EDC310095.276Panthera_tigris_altaica
MGP_PahariEiJ_G0015146Edc310098.462ENSPTRG00000007279EDC310096.260Pan_troglodytes
MGP_PahariEiJ_G0015146Edc310098.462ENSPANG00000015997EDC310096.654Papio_anubis
MGP_PahariEiJ_G0015146Edc310066.602ENSPKIG00000019810EDC310066.602Paramormyrops_kingsleyae
MGP_PahariEiJ_G0015146Edc310080.702ENSPKIG00000004416edc310070.312Paramormyrops_kingsleyae
MGP_PahariEiJ_G0015146Edc310092.308ENSPSIG00000008474EDC310082.874Pelodiscus_sinensis
MGP_PahariEiJ_G0015146Edc310078.947ENSPMGG00000007223edc310066.732Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0015146Edc310097.244ENSPEMG00000015260Edc310097.244Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0015146Edc310098.462ENSPCIG00000006276EDC37089.349Phascolarctos_cinereus
MGP_PahariEiJ_G0015146Edc310078.462ENSPFOG00000012204edc310068.959Poecilia_formosa
MGP_PahariEiJ_G0015146Edc310078.462ENSPLAG00000014420edc310068.959Poecilia_latipinna
MGP_PahariEiJ_G0015146Edc310078.462ENSPMEG00000023289edc310068.959Poecilia_mexicana
MGP_PahariEiJ_G0015146Edc310078.462ENSPREG00000016022edc310068.959Poecilia_reticulata
MGP_PahariEiJ_G0015146Edc310098.462ENSPPYG00000006642EDC310095.079Pongo_abelii
MGP_PahariEiJ_G0015146Edc39598.148ENSPCAG00000002802EDC38898.148Procavia_capensis
MGP_PahariEiJ_G0015146Edc310098.462ENSPCOG00000013364EDC310096.063Propithecus_coquereli
MGP_PahariEiJ_G0015146Edc310098.462ENSPVAG00000014733EDC310095.276Pteropus_vampyrus
MGP_PahariEiJ_G0015146Edc310078.947ENSPNYG00000021797edc310068.173Pundamilia_nyererei
MGP_PahariEiJ_G0015146Edc310072.308ENSPNYG00000009669EDC39958.398Pundamilia_nyererei
MGP_PahariEiJ_G0015146Edc310080.000ENSPNAG00000019657edc310070.039Pygocentrus_nattereri
MGP_PahariEiJ_G0015146Edc39998.617ENSRNOG00000019579Edc310098.617Rattus_norvegicus
MGP_PahariEiJ_G0015146Edc310096.923ENSRBIG00000019488EDC310096.260Rhinopithecus_bieti
MGP_PahariEiJ_G0015146Edc310096.923ENSRROG00000034959EDC310096.260Rhinopithecus_roxellana
MGP_PahariEiJ_G0015146Edc310098.462ENSSBOG00000004896EDC310096.457Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0015146Edc310098.462ENSSHAG00000015075EDC39590.798Sarcophilus_harrisii
MGP_PahariEiJ_G0015146Edc310078.462ENSSFOG00015016939edc310071.012Scleropages_formosus
MGP_PahariEiJ_G0015146Edc310080.000ENSSFOG00015002439edc39077.273Scleropages_formosus
MGP_PahariEiJ_G0015146Edc310070.769ENSSMAG00000010176-9956.189Scophthalmus_maximus
MGP_PahariEiJ_G0015146Edc310076.923ENSSMAG00000010695edc310069.352Scophthalmus_maximus
MGP_PahariEiJ_G0015146Edc310073.846ENSSDUG00000007671EDC310059.961Seriola_dumerili
MGP_PahariEiJ_G0015146Edc310078.462ENSSDUG00000021844edc310068.369Seriola_dumerili
MGP_PahariEiJ_G0015146Edc310078.462ENSSLDG00000022046edc310068.369Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0015146Edc310078.947ENSSLDG00000008406-10078.947Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0015146Edc310093.846ENSSARG00000003907EDC38096.774Sorex_araneus
MGP_PahariEiJ_G0015146Edc310098.462ENSSPUG00000008232EDC310088.780Sphenodon_punctatus
MGP_PahariEiJ_G0015146Edc310073.846ENSSPAG00000020327EDC310057.393Stegastes_partitus
MGP_PahariEiJ_G0015146Edc310080.000ENSSPAG00000010009edc310069.745Stegastes_partitus
MGP_PahariEiJ_G0015146Edc310098.462ENSSSCG00000001903EDC310096.063Sus_scrofa
MGP_PahariEiJ_G0015146Edc310096.923ENSTGUG00000004007EDC310087.795Taeniopygia_guttata
MGP_PahariEiJ_G0015146Edc310076.923ENSTRUG00000017078edc310069.941Takifugu_rubripes
MGP_PahariEiJ_G0015146Edc310074.627ENSTNIG00000016047edc310067.515Tetraodon_nigroviridis
MGP_PahariEiJ_G0015146Edc310098.462ENSTTRG00000007990EDC310095.472Tursiops_truncatus
MGP_PahariEiJ_G0015146Edc310096.923ENSUAMG00000026710-10095.669Ursus_americanus
MGP_PahariEiJ_G0015146Edc39696.364ENSUAMG00000002788-10096.364Ursus_americanus
MGP_PahariEiJ_G0015146Edc310096.923ENSUMAG00000005006EDC39695.669Ursus_maritimus
MGP_PahariEiJ_G0015146Edc39585.185ENSVPAG00000003499-7985.185Vicugna_pacos
MGP_PahariEiJ_G0015146Edc310098.462ENSVVUG00000018601EDC310095.472Vulpes_vulpes
MGP_PahariEiJ_G0015146Edc36882.184ENSXETG00000010622edc39983.333Xenopus_tropicalis
MGP_PahariEiJ_G0015146Edc310078.462ENSXMAG00000007377edc310068.959Xiphophorus_maculatus

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