EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0015232 (Gene tree)
Gene ID: 110327999
Gene Symbol: Rbpms2
Alias: 2400008B06Rik
Full Name: RNA binding protein%2C mRNA processing factor 2
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 32211 bases
Position: chr10:60566893-60599103
Accession: 110327999
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0024016	RRM_1	PF00076.22	2e-10	1	1
MGP_PahariEiJ_P0024017	RRM_1	PF00076.22	2.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0024016	-	1800	XM_021207331	MGP_PahariEiJ_P0024016	170 (aa)	XP_021062990	UPI000A309D85
MGP_PahariEiJ_T0024017	-	1940	XM_021207330	MGP_PahariEiJ_P0024017	208 (aa)	XP_021062989	UPI000A30524E

Gene Model

Click here to download MGP_PahariEiJ_G0015232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0015232's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0015232	Rbpms2	88	70.270	MGP_PahariEiJ_G0021439	Rbpms	90	72.432

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0015232	Rbpms2	100	88.095	ENSG00000166831	RBPMS2	100	90.476	Homo_sapiens
MGP_PahariEiJ_G0015232	Rbpms2	89	84.946	ENSAPOG00000007842	rbpms2b	93	85.484	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0015232	Rbpms2	100	90.476	ENSAMEG00000002664	RBPMS2	100	90.476	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0015232	Rbpms2	88	83.784	ENSACIG00000013696	rbpms2b	70	84.324	Amphilophus_citrinellus
MGP_PahariEiJ_G0015232	Rbpms2	89	84.946	ENSAOCG00000000105	rbpms2b	68	85.484	Amphiprion_ocellaris
MGP_PahariEiJ_G0015232	Rbpms2	89	84.946	ENSAPEG00000001705	rbpms2b	93	85.484	Amphiprion_percula
MGP_PahariEiJ_G0015232	Rbpms2	89	84.946	ENSATEG00000020326	rbpms2b	69	85.484	Anabas_testudineus
MGP_PahariEiJ_G0015232	Rbpms2	96	84.577	ENSAPLG00000004799	RBPMS2	90	89.189	Anas_platyrhynchos
MGP_PahariEiJ_G0015232	Rbpms2	68	92.958	ENSACAG00000012227	RBPMS2	92	91.892	Anolis_carolinensis
MGP_PahariEiJ_G0015232	Rbpms2	100	88.462	ENSANAG00000014652	RBPMS2	100	88.942	Aotus_nancymaae
MGP_PahariEiJ_G0015232	Rbpms2	89	84.946	ENSACLG00000012769	rbpms2b	69	85.484	Astatotilapia_calliptera
MGP_PahariEiJ_G0015232	Rbpms2	89	84.737	ENSAMXG00000036507	rbpms2a	93	84.737	Astyanax_mexicanus
MGP_PahariEiJ_G0015232	Rbpms2	89	82.796	ENSAMXG00000037525	rbpms2b	93	83.333	Astyanax_mexicanus
MGP_PahariEiJ_G0015232	Rbpms2	51	83.908	ENSBTAG00000049268	-	61	60.265	Bos_taurus
MGP_PahariEiJ_G0015232	Rbpms2	100	89.151	ENSBTAG00000011037	RBPMS2	100	89.623	Bos_taurus
MGP_PahariEiJ_G0015232	Rbpms2	100	88.571	ENSCJAG00000005200	RBPMS2	100	89.048	Callithrix_jacchus
MGP_PahariEiJ_G0015232	Rbpms2	100	89.720	ENSCAFG00000017098	RBPMS2	100	89.720	Canis_familiaris
MGP_PahariEiJ_G0015232	Rbpms2	100	89.720	ENSCAFG00020008908	RBPMS2	100	89.720	Canis_lupus_dingo
MGP_PahariEiJ_G0015232	Rbpms2	97	86.070	ENSCHIG00000024439	RBPMS2	91	92.818	Capra_hircus
MGP_PahariEiJ_G0015232	Rbpms2	99	75.845	ENSTSYG00000033527	-	87	85.057	Carlito_syrichta
MGP_PahariEiJ_G0015232	Rbpms2	87	94.475	ENSTSYG00000008996	-	84	94.475	Carlito_syrichta
MGP_PahariEiJ_G0015232	Rbpms2	87	86.188	ENSCAPG00000015689	RBPMS2	100	86.188	Cavia_aperea
MGP_PahariEiJ_G0015232	Rbpms2	87	86.188	ENSCPOG00000007695	RBPMS2	100	86.188	Cavia_porcellus
MGP_PahariEiJ_G0015232	Rbpms2	100	88.095	ENSCCAG00000036496	RBPMS2	100	88.571	Cebus_capucinus
MGP_PahariEiJ_G0015232	Rbpms2	100	86.190	ENSCATG00000042116	RBPMS2	100	88.571	Cercocebus_atys
MGP_PahariEiJ_G0015232	Rbpms2	87	87.845	ENSCLAG00000016082	RBPMS2	100	88.950	Chinchilla_lanigera
MGP_PahariEiJ_G0015232	Rbpms2	88	92.308	ENSCSAG00000012562	RBPMS2	83	92.857	Chlorocebus_sabaeus
MGP_PahariEiJ_G0015232	Rbpms2	100	81.731	ENSCPBG00000006048	RBPMS2	100	82.212	Chrysemys_picta_bellii
MGP_PahariEiJ_G0015232	Rbpms2	100	95.673	ENSCGRG00001014627	Rbpms2	100	95.673	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0015232	Rbpms2	87	96.685	ENSCGRG00000005899	Rbpms2	100	96.685	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0015232	Rbpms2	89	84.946	ENSCVAG00000004878	rbpms2b	71	85.484	Cyprinodon_variegatus
MGP_PahariEiJ_G0015232	Rbpms2	99	79.710	ENSDARG00000045930	rbpms2a	93	86.559	Danio_rerio
MGP_PahariEiJ_G0015232	Rbpms2	89	86.022	ENSDARG00000079578	rbpms2b	93	86.022	Danio_rerio
MGP_PahariEiJ_G0015232	Rbpms2	99	86.341	ENSDNOG00000048895	RBPMS2	95	85.854	Dasypus_novemcinctus
MGP_PahariEiJ_G0015232	Rbpms2	88	91.209	ENSDORG00000004025	-	97	90.659	Dipodomys_ordii
MGP_PahariEiJ_G0015232	Rbpms2	89	81.081	ENSDORG00000023373	-	95	81.622	Dipodomys_ordii
MGP_PahariEiJ_G0015232	Rbpms2	99	81.643	ENSETEG00000010176	RBPMS2	100	82.609	Echinops_telfairi
MGP_PahariEiJ_G0015232	Rbpms2	88	51.337	ENSEBUG00000005004	-	74	57.143	Eptatretus_burgeri
MGP_PahariEiJ_G0015232	Rbpms2	88	71.892	ENSEBUG00000000297	RBPMS2	93	74.054	Eptatretus_burgeri
MGP_PahariEiJ_G0015232	Rbpms2	88	65.591	ENSEBUG00000012768	RBPMS2	86	71.711	Eptatretus_burgeri
MGP_PahariEiJ_G0015232	Rbpms2	100	90.566	ENSEASG00005006523	RBPMS2	100	90.094	Equus_asinus_asinus
MGP_PahariEiJ_G0015232	Rbpms2	87	95.580	ENSECAG00000015345	RBPMS2	84	95.580	Equus_caballus
MGP_PahariEiJ_G0015232	Rbpms2	94	81.122	ENSELUG00000021784	rbpms2b	77	85.542	Esox_lucius
MGP_PahariEiJ_G0015232	Rbpms2	89	88.172	ENSELUG00000023770	RBPMS	93	87.634	Esox_lucius
MGP_PahariEiJ_G0015232	Rbpms2	100	91.429	ENSFCAG00000032451	RBPMS2	100	91.429	Felis_catus
MGP_PahariEiJ_G0015232	Rbpms2	89	88.108	ENSFALG00000009836	RBPMS2	93	88.649	Ficedula_albicollis
MGP_PahariEiJ_G0015232	Rbpms2	87	87.845	ENSFDAG00000016154	RBPMS2	100	88.950	Fukomys_damarensis
MGP_PahariEiJ_G0015232	Rbpms2	89	84.946	ENSFHEG00000014766	rbpms2b	71	85.484	Fundulus_heteroclitus
MGP_PahariEiJ_G0015232	Rbpms2	88	85.792	ENSGMOG00000008502	rbpms2b	100	85.246	Gadus_morhua
MGP_PahariEiJ_G0015232	Rbpms2	100	84.135	ENSGALG00000030988	RBPMS2	100	84.135	Gallus_gallus
MGP_PahariEiJ_G0015232	Rbpms2	75	81.013	ENSGAFG00000002978	rbpms2b	84	81.646	Gambusia_affinis
MGP_PahariEiJ_G0015232	Rbpms2	88	84.153	ENSGACG00000017472	rbpms2b	100	84.699	Gasterosteus_aculeatus
MGP_PahariEiJ_G0015232	Rbpms2	100	82.212	ENSGAGG00000020044	RBPMS2	100	82.692	Gopherus_agassizii
MGP_PahariEiJ_G0015232	Rbpms2	87	93.370	ENSGGOG00000008984	RBPMS2	100	93.923	Gorilla_gorilla
MGP_PahariEiJ_G0015232	Rbpms2	89	84.946	ENSHBUG00000009135	rbpms2b	69	85.484	Haplochromis_burtoni
MGP_PahariEiJ_G0015232	Rbpms2	100	84.135	ENSHGLG00000008504	RBPMS2	100	82.692	Heterocephalus_glaber_female
MGP_PahariEiJ_G0015232	Rbpms2	87	87.293	ENSHGLG00100019122	RBPMS2	100	88.398	Heterocephalus_glaber_male
MGP_PahariEiJ_G0015232	Rbpms2	89	85.484	ENSHCOG00000018429	rbpms2b	93	86.022	Hippocampus_comes
MGP_PahariEiJ_G0015232	Rbpms2	89	83.333	ENSIPUG00000020981	RBPMS	99	82.967	Ictalurus_punctatus
MGP_PahariEiJ_G0015232	Rbpms2	89	87.097	ENSIPUG00000014032	RBPMS	93	87.634	Ictalurus_punctatus
MGP_PahariEiJ_G0015232	Rbpms2	100	92.308	ENSSTOG00000010055	RBPMS2	100	92.308	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0015232	Rbpms2	99	86.473	ENSJJAG00000001664	Rbpms2	99	86.473	Jaculus_jaculus
MGP_PahariEiJ_G0015232	Rbpms2	89	84.409	ENSKMAG00000002005	rbpms2b	64	84.946	Kryptolebias_marmoratus
MGP_PahariEiJ_G0015232	Rbpms2	90	70.513	ENSLBEG00000017287	rbpms2b	80	76.301	Labrus_bergylta
MGP_PahariEiJ_G0015232	Rbpms2	93	84.021	ENSLACG00000016999	RBPMS2	93	86.022	Latimeria_chalumnae
MGP_PahariEiJ_G0015232	Rbpms2	100	82.297	ENSLOCG00000015018	rbpms2b	100	82.775	Lepisosteus_oculatus
MGP_PahariEiJ_G0015232	Rbpms2	88	91.209	ENSLAFG00000018725	RBPMS2	100	92.308	Loxodonta_africana
MGP_PahariEiJ_G0015232	Rbpms2	100	86.190	ENSMFAG00000045343	RBPMS2	100	88.571	Macaca_fascicularis
MGP_PahariEiJ_G0015232	Rbpms2	100	86.190	ENSMMUG00000013270	RBPMS2	100	88.571	Macaca_mulatta
MGP_PahariEiJ_G0015232	Rbpms2	100	86.190	ENSMNEG00000019330	RBPMS2	100	88.571	Macaca_nemestrina
MGP_PahariEiJ_G0015232	Rbpms2	87	92.265	ENSMLEG00000035922	RBPMS2	100	92.818	Mandrillus_leucophaeus
MGP_PahariEiJ_G0015232	Rbpms2	89	84.946	ENSMAMG00000014149	rbpms2b	97	85.246	Mastacembelus_armatus
MGP_PahariEiJ_G0015232	Rbpms2	89	84.946	ENSMZEG00005013727	rbpms2b	93	85.484	Maylandia_zebra
MGP_PahariEiJ_G0015232	Rbpms2	89	88.108	ENSMGAG00000001128	RBPMS2	93	88.649	Meleagris_gallopavo
MGP_PahariEiJ_G0015232	Rbpms2	93	95.855	ENSMAUG00000019407	Rbpms2	100	95.855	Mesocricetus_auratus
MGP_PahariEiJ_G0015232	Rbpms2	100	88.152	ENSMICG00000029953	RBPMS2	100	88.626	Microcebus_murinus
MGP_PahariEiJ_G0015232	Rbpms2	88	97.802	ENSMOCG00000021603	Rbpms2	91	97.802	Microtus_ochrogaster
MGP_PahariEiJ_G0015232	Rbpms2	88	84.324	ENSMMOG00000002240	rbpms2b	90	84.865	Mola_mola
MGP_PahariEiJ_G0015232	Rbpms2	100	85.849	ENSMODG00000010487	RBPMS2	100	86.321	Monodelphis_domestica
MGP_PahariEiJ_G0015232	Rbpms2	89	77.419	ENSMALG00000014621	rbpms2b	67	77.419	Monopterus_albus
MGP_PahariEiJ_G0015232	Rbpms2	100	96.190	MGP_CAROLIEiJ_G0032367	Rbpms2	100	96.190	Mus_caroli
MGP_PahariEiJ_G0015232	Rbpms2	100	96.190	ENSMUSG00000032387	Rbpms2	100	96.190	Mus_musculus
MGP_PahariEiJ_G0015232	Rbpms2	100	96.190	MGP_SPRETEiJ_G0033506	Rbpms2	100	96.190	Mus_spretus
MGP_PahariEiJ_G0015232	Rbpms2	88	91.209	ENSMPUG00000000553	RBPMS2	90	92.308	Mustela_putorius_furo
MGP_PahariEiJ_G0015232	Rbpms2	96	82.915	ENSMLUG00000013394	RBPMS2	88	88.827	Myotis_lucifugus
MGP_PahariEiJ_G0015232	Rbpms2	100	94.737	ENSNGAG00000023569	Rbpms2	100	94.737	Nannospalax_galili
MGP_PahariEiJ_G0015232	Rbpms2	89	84.946	ENSNBRG00000019943	rbpms2b	69	85.484	Neolamprologus_brichardi
MGP_PahariEiJ_G0015232	Rbpms2	79	90.244	ENSOPRG00000013668	RBPMS2	100	90.244	Ochotona_princeps
MGP_PahariEiJ_G0015232	Rbpms2	87	87.845	ENSODEG00000016172	RBPMS2	95	88.950	Octodon_degus
MGP_PahariEiJ_G0015232	Rbpms2	89	84.946	ENSONIG00000005770	rbpms2b	93	85.484	Oreochromis_niloticus
MGP_PahariEiJ_G0015232	Rbpms2	66	92.035	ENSOANG00000011802	-	80	91.228	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0015232	Rbpms2	100	91.905	ENSOCUG00000010388	RBPMS2	100	91.429	Oryctolagus_cuniculus
MGP_PahariEiJ_G0015232	Rbpms2	89	84.946	ENSORLG00000027223	rbpms2b	70	85.484	Oryzias_latipes
MGP_PahariEiJ_G0015232	Rbpms2	89	84.946	ENSORLG00020001166	rbpms2b	70	85.484	Oryzias_latipes_hni
MGP_PahariEiJ_G0015232	Rbpms2	89	84.946	ENSORLG00015001749	rbpms2b	70	85.484	Oryzias_latipes_hsok
MGP_PahariEiJ_G0015232	Rbpms2	89	85.484	ENSOMEG00000006495	rbpms2b	92	79.570	Oryzias_melastigma
MGP_PahariEiJ_G0015232	Rbpms2	99	85.366	ENSOGAG00000026017	RBPMS2	99	85.854	Otolemur_garnettii
MGP_PahariEiJ_G0015232	Rbpms2	99	83.333	ENSOARG00000020727	RBPMS2	100	83.810	Ovis_aries
MGP_PahariEiJ_G0015232	Rbpms2	87	93.370	ENSPPAG00000024456	RBPMS2	100	93.923	Pan_paniscus
MGP_PahariEiJ_G0015232	Rbpms2	100	91.429	ENSPPRG00000014944	RBPMS2	100	91.429	Panthera_pardus
MGP_PahariEiJ_G0015232	Rbpms2	87	95.580	ENSPTIG00000017879	RBPMS2	86	95.580	Panthera_tigris_altaica
MGP_PahariEiJ_G0015232	Rbpms2	100	88.571	ENSPTRG00000007165	RBPMS2	100	90.952	Pan_troglodytes
MGP_PahariEiJ_G0015232	Rbpms2	100	85.782	ENSPANG00000016754	RBPMS2	100	86.124	Papio_anubis
MGP_PahariEiJ_G0015232	Rbpms2	89	85.484	ENSPKIG00000022509	rbpms2a	93	86.022	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0015232	Rbpms2	89	81.183	ENSPKIG00000012634	rbpms2b	93	81.183	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0015232	Rbpms2	87	88.950	ENSPSIG00000013115	RBPMS2	100	89.503	Pelodiscus_sinensis
MGP_PahariEiJ_G0015232	Rbpms2	92	79.688	ENSPMGG00000021154	rbpms2b	88	84.571	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0015232	Rbpms2	100	86.538	ENSPCIG00000029447	RBPMS2	100	87.019	Phascolarctos_cinereus
MGP_PahariEiJ_G0015232	Rbpms2	89	84.946	ENSPFOG00000016067	rbpms2b	93	85.484	Poecilia_formosa
MGP_PahariEiJ_G0015232	Rbpms2	89	84.946	ENSPLAG00000008831	rbpms2b	93	85.484	Poecilia_latipinna
MGP_PahariEiJ_G0015232	Rbpms2	89	84.946	ENSPMEG00000007868	rbpms2b	93	85.484	Poecilia_mexicana
MGP_PahariEiJ_G0015232	Rbpms2	89	81.579	ENSPREG00000005953	rbpms2b	93	81.579	Poecilia_reticulata
MGP_PahariEiJ_G0015232	Rbpms2	88	86.631	ENSPPYG00000006553	-	83	88.770	Pongo_abelii
MGP_PahariEiJ_G0015232	Rbpms2	87	90.608	ENSPCAG00000015797	RBPMS2	100	92.265	Procavia_capensis
MGP_PahariEiJ_G0015232	Rbpms2	100	87.143	ENSPCOG00000023778	RBPMS2	100	88.095	Propithecus_coquereli
MGP_PahariEiJ_G0015232	Rbpms2	87	95.028	ENSPVAG00000016622	RBPMS2	100	95.028	Pteropus_vampyrus
MGP_PahariEiJ_G0015232	Rbpms2	89	84.946	ENSPNYG00000010761	rbpms2b	69	85.484	Pundamilia_nyererei
MGP_PahariEiJ_G0015232	Rbpms2	89	84.409	ENSPNAG00000004816	rbpms2b	98	82.162	Pygocentrus_nattereri
MGP_PahariEiJ_G0015232	Rbpms2	89	88.172	ENSPNAG00000027343	rbpms2a	93	88.710	Pygocentrus_nattereri
MGP_PahariEiJ_G0015232	Rbpms2	100	97.143	ENSRNOG00000015896	Rbpms2	100	97.143	Rattus_norvegicus
MGP_PahariEiJ_G0015232	Rbpms2	88	91.758	ENSRROG00000006473	RBPMS2	90	92.308	Rhinopithecus_roxellana
MGP_PahariEiJ_G0015232	Rbpms2	87	92.818	ENSSBOG00000020118	RBPMS2	100	93.370	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0015232	Rbpms2	87	89.503	ENSSHAG00000007448	RBPMS2	100	90.055	Sarcophilus_harrisii
MGP_PahariEiJ_G0015232	Rbpms2	89	83.333	ENSSFOG00015010476	rbpms2b	99	83.516	Scleropages_formosus
MGP_PahariEiJ_G0015232	Rbpms2	93	82.990	ENSSFOG00015022055	rbpms2	93	86.022	Scleropages_formosus
MGP_PahariEiJ_G0015232	Rbpms2	89	84.946	ENSSMAG00000009743	rbpms2b	62	85.484	Scophthalmus_maximus
MGP_PahariEiJ_G0015232	Rbpms2	89	81.579	ENSSLDG00000023070	rbpms2b	68	81.579	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0015232	Rbpms2	100	81.731	ENSSPUG00000006378	RBPMS2	100	82.212	Sphenodon_punctatus
MGP_PahariEiJ_G0015232	Rbpms2	89	84.946	ENSSPAG00000001979	rbpms2b	93	85.484	Stegastes_partitus
MGP_PahariEiJ_G0015232	Rbpms2	100	88.679	ENSSSCG00000004549	RBPMS2	100	87.736	Sus_scrofa
MGP_PahariEiJ_G0015232	Rbpms2	68	93.662	ENSTGUG00000004722	RBPMS2	92	92.568	Taeniopygia_guttata
MGP_PahariEiJ_G0015232	Rbpms2	89	84.946	ENSTRUG00000025375	rbpms2b	69	85.484	Takifugu_rubripes
MGP_PahariEiJ_G0015232	Rbpms2	89	90.270	ENSTTRG00000011840	RBPMS2	91	94.054	Tursiops_truncatus
MGP_PahariEiJ_G0015232	Rbpms2	94	91.795	ENSUMAG00000012614	RBPMS2	87	92.973	Ursus_maritimus
MGP_PahariEiJ_G0015232	Rbpms2	88	93.478	ENSVVUG00000013801	RBPMS2	91	93.478	Vulpes_vulpes
MGP_PahariEiJ_G0015232	Rbpms2	87	85.165	ENSXCOG00000000567	rbpms2b	94	84.324	Xiphophorus_couchianus
MGP_PahariEiJ_G0015232	Rbpms2	89	84.946	ENSXMAG00000001210	rbpms2b	93	85.484	Xiphophorus_maculatus