EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0015235 (Gene tree)
Gene ID: 110327448
Gene Symbol: Trip4
Alias: 4930558E03Rik|ASC-1
Full Name: thyroid hormone receptor interactor 4
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 88304 bases
Position: chr10:60771655-60859958
Accession: 110327448
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0024025	ASCH	PF04266.14	2.5e-19	1	1
MGP_PahariEiJ_P0024026	ASCH	PF04266.14	2.5e-19	1	1
MGP_PahariEiJ_P0024023	ASCH	PF04266.14	1.9e-18	1	1
MGP_PahariEiJ_P0024024	ASCH	PF04266.14	1.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0024034	-	561	-	-	- (aa)	-	-
MGP_PahariEiJ_T0024025	-	4080	-	MGP_PahariEiJ_P0024025	581 (aa)	XP_021062102	UPI000A3135BB
MGP_PahariEiJ_T0024024	-	3787	-	MGP_PahariEiJ_P0024024	539 (aa)	-	-
MGP_PahariEiJ_T0024027	-	508	-	-	- (aa)	-	-
MGP_PahariEiJ_T0024026	-	1980	-	MGP_PahariEiJ_P0024026	581 (aa)	XP_021062102	UPI000A3135BB
MGP_PahariEiJ_T0024032	-	895	-	-	- (aa)	-	-
MGP_PahariEiJ_T0024033	-	683	-	-	- (aa)	-	-
MGP_PahariEiJ_T0024023	-	8017	-	MGP_PahariEiJ_P0024023	539 (aa)	-	-
MGP_PahariEiJ_T0024031	-	1540	-	-	- (aa)	-	-
MGP_PahariEiJ_T0024028	-	661	-	MGP_PahariEiJ_P0024028	56 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0015235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0015235's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0015235	Trip4	100	88.468	ENSG00000103671	TRIP4	100	88.468	Homo_sapiens
MGP_PahariEiJ_G0015235	Trip4	95	45.975	ENSAPOG00000023326	trip4	97	45.975	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0015235	Trip4	100	85.370	ENSAMEG00000002591	TRIP4	100	85.370	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0015235	Trip4	96	52.381	ENSACIG00000010577	trip4	97	53.309	Amphilophus_citrinellus
MGP_PahariEiJ_G0015235	Trip4	96	56.762	ENSAOCG00000000395	trip4	96	53.954	Amphiprion_ocellaris
MGP_PahariEiJ_G0015235	Trip4	97	56.604	ENSAPEG00000003621	trip4	99	57.461	Amphiprion_percula
MGP_PahariEiJ_G0015235	Trip4	97	58.003	ENSATEG00000019577	trip4	99	58.520	Anabas_testudineus
MGP_PahariEiJ_G0015235	Trip4	99	68.954	ENSAPLG00000004612	TRIP4	99	68.954	Anas_platyrhynchos
MGP_PahariEiJ_G0015235	Trip4	98	67.938	ENSACAG00000007077	TRIP4	90	68.458	Anolis_carolinensis
MGP_PahariEiJ_G0015235	Trip4	100	86.919	ENSANAG00000027612	TRIP4	100	86.919	Aotus_nancymaae
MGP_PahariEiJ_G0015235	Trip4	98	59.240	ENSACLG00000013819	trip4	99	59.310	Astatotilapia_calliptera
MGP_PahariEiJ_G0015235	Trip4	97	60.243	ENSAMXG00000007270	trip4	99	60.764	Astyanax_mexicanus
MGP_PahariEiJ_G0015235	Trip4	99	83.993	ENSBTAG00000014493	TRIP4	99	83.993	Bos_taurus
MGP_PahariEiJ_G0015235	Trip4	100	86.575	ENSCJAG00000005107	TRIP4	100	86.575	Callithrix_jacchus
MGP_PahariEiJ_G0015235	Trip4	100	85.370	ENSCAFG00000017091	TRIP4	100	85.370	Canis_familiaris
MGP_PahariEiJ_G0015235	Trip4	100	85.370	ENSCAFG00020008960	TRIP4	100	85.370	Canis_lupus_dingo
MGP_PahariEiJ_G0015235	Trip4	97	83.452	ENSCHIG00000023818	TRIP4	98	83.452	Capra_hircus
MGP_PahariEiJ_G0015235	Trip4	100	87.091	ENSTSYG00000007185	TRIP4	100	87.091	Carlito_syrichta
MGP_PahariEiJ_G0015235	Trip4	70	83.929	ENSCAPG00000017624	TRIP4	96	75.817	Cavia_aperea
MGP_PahariEiJ_G0015235	Trip4	100	86.919	ENSCPOG00000006483	TRIP4	100	86.919	Cavia_porcellus
MGP_PahariEiJ_G0015235	Trip4	100	81.411	ENSCCAG00000026483	TRIP4	100	81.411	Cebus_capucinus
MGP_PahariEiJ_G0015235	Trip4	100	88.468	ENSCATG00000041144	TRIP4	100	88.468	Cercocebus_atys
MGP_PahariEiJ_G0015235	Trip4	100	87.608	ENSCLAG00000006872	TRIP4	100	87.608	Chinchilla_lanigera
MGP_PahariEiJ_G0015235	Trip4	100	88.296	ENSCSAG00000012499	TRIP4	100	88.296	Chlorocebus_sabaeus
MGP_PahariEiJ_G0015235	Trip4	82	75.758	ENSCHOG00000010776	TRIP4	82	75.758	Choloepus_hoffmanni
MGP_PahariEiJ_G0015235	Trip4	97	67.958	ENSCPBG00000006093	TRIP4	99	67.958	Chrysemys_picta_bellii
MGP_PahariEiJ_G0015235	Trip4	99	42.053	ENSCSAVG00000005293	-	99	42.053	Ciona_savignyi
MGP_PahariEiJ_G0015235	Trip4	100	84.854	ENSCANG00000033593	TRIP4	100	84.854	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0015235	Trip4	100	94.148	ENSCGRG00001021158	Trip4	100	94.148	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0015235	Trip4	91	92.143	ENSCGRG00000002340	Trip4	100	92.143	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0015235	Trip4	97	57.216	ENSCSEG00000009015	trip4	98	57.388	Cynoglossus_semilaevis
MGP_PahariEiJ_G0015235	Trip4	96	56.497	ENSCVAG00000021094	-	90	56.497	Cyprinodon_variegatus
MGP_PahariEiJ_G0015235	Trip4	96	57.411	ENSCVAG00000020984	trip4	99	56.983	Cyprinodon_variegatus
MGP_PahariEiJ_G0015235	Trip4	97	58.988	ENSDARG00000098074	trip4	99	59.511	Danio_rerio
MGP_PahariEiJ_G0015235	Trip4	100	84.854	ENSDNOG00000008654	TRIP4	100	84.854	Dasypus_novemcinctus
MGP_PahariEiJ_G0015235	Trip4	100	88.640	ENSDORG00000014914	Trip4	100	88.640	Dipodomys_ordii
MGP_PahariEiJ_G0015235	Trip4	75	38.688	FBgn0031115	CG11710	81	38.688	Drosophila_melanogaster
MGP_PahariEiJ_G0015235	Trip4	100	80.546	ENSETEG00000001597	TRIP4	100	80.546	Echinops_telfairi
MGP_PahariEiJ_G0015235	Trip4	97	47.644	ENSEBUG00000009039	trip4	98	47.561	Eptatretus_burgeri
MGP_PahariEiJ_G0015235	Trip4	100	86.231	ENSEASG00005006538	TRIP4	100	86.231	Equus_asinus_asinus
MGP_PahariEiJ_G0015235	Trip4	97	85.333	ENSECAG00000024689	TRIP4	97	85.333	Equus_caballus
MGP_PahariEiJ_G0015235	Trip4	80	84.293	ENSEEUG00000007741	TRIP4	80	84.293	Erinaceus_europaeus
MGP_PahariEiJ_G0015235	Trip4	98	55.897	ENSELUG00000022449	trip4	99	55.897	Esox_lucius
MGP_PahariEiJ_G0015235	Trip4	100	86.059	ENSFCAG00000010618	TRIP4	100	86.059	Felis_catus
MGP_PahariEiJ_G0015235	Trip4	98	67.301	ENSFALG00000009816	TRIP4	99	67.474	Ficedula_albicollis
MGP_PahariEiJ_G0015235	Trip4	100	86.747	ENSFDAG00000017051	TRIP4	100	86.747	Fukomys_damarensis
MGP_PahariEiJ_G0015235	Trip4	97	58.348	ENSFHEG00000015795	trip4	99	58.348	Fundulus_heteroclitus
MGP_PahariEiJ_G0015235	Trip4	97	56.696	ENSGMOG00000008455	trip4	99	56.696	Gadus_morhua
MGP_PahariEiJ_G0015235	Trip4	100	68.313	ENSGALG00000030672	TRIP4	99	68.313	Gallus_gallus
MGP_PahariEiJ_G0015235	Trip4	97	57.560	ENSGAFG00000003491	trip4	99	57.560	Gambusia_affinis
MGP_PahariEiJ_G0015235	Trip4	98	57.241	ENSGACG00000016986	trip4	99	56.926	Gasterosteus_aculeatus
MGP_PahariEiJ_G0015235	Trip4	81	70.136	ENSGAGG00000003671	TRIP4	85	70.084	Gopherus_agassizii
MGP_PahariEiJ_G0015235	Trip4	100	88.296	ENSGGOG00000022608	TRIP4	100	88.296	Gorilla_gorilla
MGP_PahariEiJ_G0015235	Trip4	98	59.240	ENSHBUG00000021071	trip4	99	59.310	Haplochromis_burtoni
MGP_PahariEiJ_G0015235	Trip4	100	87.091	ENSHGLG00000009286	TRIP4	100	87.091	Heterocephalus_glaber_female
MGP_PahariEiJ_G0015235	Trip4	100	86.919	ENSHGLG00100017760	TRIP4	100	86.919	Heterocephalus_glaber_male
MGP_PahariEiJ_G0015235	Trip4	97	57.143	ENSHCOG00000017904	trip4	98	57.659	Hippocampus_comes
MGP_PahariEiJ_G0015235	Trip4	98	58.824	ENSIPUG00000013205	trip4	99	59.516	Ictalurus_punctatus
MGP_PahariEiJ_G0015235	Trip4	100	88.124	ENSSTOG00000014228	TRIP4	100	88.124	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0015235	Trip4	97	79.857	ENSJJAG00000001629	Trip4	99	79.857	Jaculus_jaculus
MGP_PahariEiJ_G0015235	Trip4	97	60.558	ENSKMAG00000001297	trip4	99	60.558	Kryptolebias_marmoratus
MGP_PahariEiJ_G0015235	Trip4	98	57.612	ENSLBEG00000018354	trip4	99	58.491	Labrus_bergylta
MGP_PahariEiJ_G0015235	Trip4	98	62.759	ENSLACG00000014856	TRIP4	99	62.671	Latimeria_chalumnae
MGP_PahariEiJ_G0015235	Trip4	98	62.718	ENSLOCG00000014993	trip4	99	62.718	Lepisosteus_oculatus
MGP_PahariEiJ_G0015235	Trip4	100	84.854	ENSLAFG00000017612	TRIP4	100	84.854	Loxodonta_africana
MGP_PahariEiJ_G0015235	Trip4	100	88.124	ENSMFAG00000036568	TRIP4	100	88.124	Macaca_fascicularis
MGP_PahariEiJ_G0015235	Trip4	100	88.124	ENSMMUG00000009882	TRIP4	100	88.124	Macaca_mulatta
MGP_PahariEiJ_G0015235	Trip4	100	88.296	ENSMNEG00000033592	TRIP4	100	88.296	Macaca_nemestrina
MGP_PahariEiJ_G0015235	Trip4	100	88.124	ENSMLEG00000027911	TRIP4	100	88.124	Mandrillus_leucophaeus
MGP_PahariEiJ_G0015235	Trip4	97	58.076	ENSMAMG00000013374	trip4	99	58.076	Mastacembelus_armatus
MGP_PahariEiJ_G0015235	Trip4	98	59.240	ENSMZEG00005013450	trip4	99	59.310	Maylandia_zebra
MGP_PahariEiJ_G0015235	Trip4	100	88.296	ENSMICG00000008679	TRIP4	100	88.296	Microcebus_murinus
MGP_PahariEiJ_G0015235	Trip4	100	93.804	ENSMOCG00000012669	Trip4	100	93.804	Microtus_ochrogaster
MGP_PahariEiJ_G0015235	Trip4	96	56.926	ENSMMOG00000002315	trip4	98	57.904	Mola_mola
MGP_PahariEiJ_G0015235	Trip4	100	78.007	ENSMODG00000010743	TRIP4	91	78.007	Monodelphis_domestica
MGP_PahariEiJ_G0015235	Trip4	100	97.762	MGP_CAROLIEiJ_G0032370	Trip4	100	97.762	Mus_caroli
MGP_PahariEiJ_G0015235	Trip4	100	97.590	ENSMUSG00000032386	Trip4	100	97.590	Mus_musculus
MGP_PahariEiJ_G0015235	Trip4	100	97.935	MGP_SPRETEiJ_G0033509	Trip4	100	97.935	Mus_spretus
MGP_PahariEiJ_G0015235	Trip4	100	85.370	ENSMPUG00000000568	TRIP4	100	85.370	Mustela_putorius_furo
MGP_PahariEiJ_G0015235	Trip4	95	85.091	ENSMLUG00000013367	TRIP4	100	85.091	Myotis_lucifugus
MGP_PahariEiJ_G0015235	Trip4	100	90.738	ENSNGAG00000019566	Trip4	100	90.738	Nannospalax_galili
MGP_PahariEiJ_G0015235	Trip4	96	58.554	ENSNBRG00000020663	trip4	97	59.436	Neolamprologus_brichardi
MGP_PahariEiJ_G0015235	Trip4	100	88.124	ENSNLEG00000012455	TRIP4	100	88.124	Nomascus_leucogenys
MGP_PahariEiJ_G0015235	Trip4	72	73.333	ENSMEUG00000005886	TRIP4	86	73.333	Notamacropus_eugenii
MGP_PahariEiJ_G0015235	Trip4	100	82.100	ENSOPRG00000009512	TRIP4	100	82.100	Ochotona_princeps
MGP_PahariEiJ_G0015235	Trip4	100	86.231	ENSODEG00000016494	TRIP4	100	86.231	Octodon_degus
MGP_PahariEiJ_G0015235	Trip4	96	57.925	ENSONIG00000005703	trip4	98	57.925	Oreochromis_niloticus
MGP_PahariEiJ_G0015235	Trip4	98	76.182	ENSOANG00000013357	TRIP4	96	76.182	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0015235	Trip4	100	87.435	ENSOCUG00000002322	TRIP4	100	87.435	Oryctolagus_cuniculus
MGP_PahariEiJ_G0015235	Trip4	97	57.266	ENSORLG00000001710	trip4	99	57.612	Oryzias_latipes
MGP_PahariEiJ_G0015235	Trip4	97	57.759	ENSORLG00020022346	trip4	99	58.103	Oryzias_latipes_hni
MGP_PahariEiJ_G0015235	Trip4	97	57.045	ENSORLG00015022509	trip4	99	57.388	Oryzias_latipes_hsok
MGP_PahariEiJ_G0015235	Trip4	97	59.862	ENSOMEG00000007655	trip4	99	60.208	Oryzias_melastigma
MGP_PahariEiJ_G0015235	Trip4	100	78.559	ENSOGAG00000012427	TRIP4	100	78.559	Otolemur_garnettii
MGP_PahariEiJ_G0015235	Trip4	99	83.993	ENSOARG00000020739	TRIP4	99	83.993	Ovis_aries
MGP_PahariEiJ_G0015235	Trip4	100	88.296	ENSPPAG00000017953	TRIP4	100	88.296	Pan_paniscus
MGP_PahariEiJ_G0015235	Trip4	100	85.714	ENSPPRG00000013668	TRIP4	100	85.714	Panthera_pardus
MGP_PahariEiJ_G0015235	Trip4	100	85.886	ENSPTIG00000014502	TRIP4	100	85.886	Panthera_tigris_altaica
MGP_PahariEiJ_G0015235	Trip4	100	80.207	ENSPTRG00000007160	TRIP4	100	80.207	Pan_troglodytes
MGP_PahariEiJ_G0015235	Trip4	100	88.468	ENSPANG00000016750	TRIP4	100	88.468	Papio_anubis
MGP_PahariEiJ_G0015235	Trip4	96	57.333	ENSPKIG00000009253	trip4	99	57.333	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0015235	Trip4	98	58.681	ENSPKIG00000022978	-	99	58.681	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0015235	Trip4	94	68.468	ENSPSIG00000012082	TRIP4	98	68.468	Pelodiscus_sinensis
MGP_PahariEiJ_G0015235	Trip4	98	54.340	ENSPMGG00000019015	trip4	98	54.688	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0015235	Trip4	100	90.189	ENSPEMG00000012446	Trip4	100	90.189	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0015235	Trip4	100	76.804	ENSPCIG00000029450	TRIP4	95	76.804	Phascolarctos_cinereus
MGP_PahariEiJ_G0015235	Trip4	97	56.997	ENSPFOG00000014732	trip4	99	56.997	Poecilia_formosa
MGP_PahariEiJ_G0015235	Trip4	97	57.167	ENSPLAG00000013794	trip4	99	57.167	Poecilia_latipinna
MGP_PahariEiJ_G0015235	Trip4	97	57.167	ENSPMEG00000001331	trip4	99	57.167	Poecilia_mexicana
MGP_PahariEiJ_G0015235	Trip4	97	56.314	ENSPREG00000006576	trip4	99	56.314	Poecilia_reticulata
MGP_PahariEiJ_G0015235	Trip4	100	88.124	ENSPPYG00000006550	TRIP4	100	88.124	Pongo_abelii
MGP_PahariEiJ_G0015235	Trip4	98	73.860	ENSPCAG00000016310	TRIP4	100	73.666	Procavia_capensis
MGP_PahariEiJ_G0015235	Trip4	100	72.852	ENSPCOG00000013484	TRIP4	100	72.852	Propithecus_coquereli
MGP_PahariEiJ_G0015235	Trip4	96	75.134	ENSPVAG00000016613	TRIP4	100	75.134	Pteropus_vampyrus
MGP_PahariEiJ_G0015235	Trip4	98	56.174	ENSPNYG00000011318	trip4	98	56.174	Pundamilia_nyererei
MGP_PahariEiJ_G0015235	Trip4	98	59.722	ENSPNAG00000020884	trip4	99	60.243	Pygocentrus_nattereri
MGP_PahariEiJ_G0015235	Trip4	100	94.320	ENSRNOG00000016121	Trip4	100	94.320	Rattus_norvegicus
MGP_PahariEiJ_G0015235	Trip4	88	89.600	ENSRBIG00000038027	TRIP4	100	89.600	Rhinopithecus_bieti
MGP_PahariEiJ_G0015235	Trip4	100	88.468	ENSRROG00000030525	TRIP4	100	88.468	Rhinopithecus_roxellana
MGP_PahariEiJ_G0015235	Trip4	100	75.043	ENSSBOG00000020516	TRIP4	100	75.986	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0015235	Trip4	94	78.285	ENSSHAG00000000040	TRIP4	100	78.285	Sarcophilus_harrisii
MGP_PahariEiJ_G0015235	Trip4	97	60.209	ENSSFOG00015000143	trip4	98	60.384	Scleropages_formosus
MGP_PahariEiJ_G0015235	Trip4	97	57.465	ENSSMAG00000010539	trip4	99	57.465	Scophthalmus_maximus
MGP_PahariEiJ_G0015235	Trip4	97	55.822	ENSSDUG00000000225	trip4	99	56.849	Seriola_dumerili
MGP_PahariEiJ_G0015235	Trip4	97	55.918	ENSSLDG00000000215	trip4	99	56.604	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0015235	Trip4	83	84.770	ENSSARG00000003710	TRIP4	83	84.770	Sorex_araneus
MGP_PahariEiJ_G0015235	Trip4	96	61.290	ENSSPUG00000004511	TRIP4	98	62.075	Sphenodon_punctatus
MGP_PahariEiJ_G0015235	Trip4	97	58.462	ENSSPAG00000008520	trip4	99	58.462	Stegastes_partitus
MGP_PahariEiJ_G0015235	Trip4	100	85.714	ENSSSCG00000004552	TRIP4	90	85.714	Sus_scrofa
MGP_PahariEiJ_G0015235	Trip4	98	68.007	ENSTGUG00000004673	TRIP4	100	68.007	Taeniopygia_guttata
MGP_PahariEiJ_G0015235	Trip4	97	56.477	ENSTRUG00000016488	trip4	99	56.995	Takifugu_rubripes
MGP_PahariEiJ_G0015235	Trip4	98	56.604	ENSTNIG00000009582	trip4	98	56.604	Tetraodon_nigroviridis
MGP_PahariEiJ_G0015235	Trip4	94	87.774	ENSTBEG00000015881	TRIP4	100	87.774	Tupaia_belangeri
MGP_PahariEiJ_G0015235	Trip4	89	89.844	ENSTTRG00000009674	TRIP4	89	89.844	Tursiops_truncatus
MGP_PahariEiJ_G0015235	Trip4	100	85.026	ENSUMAG00000012640	TRIP4	100	85.026	Ursus_maritimus
MGP_PahariEiJ_G0015235	Trip4	100	81.411	ENSVPAG00000010808	TRIP4	100	81.411	Vicugna_pacos
MGP_PahariEiJ_G0015235	Trip4	100	85.714	ENSVVUG00000013776	TRIP4	100	85.714	Vulpes_vulpes
MGP_PahariEiJ_G0015235	Trip4	97	59.516	ENSXETG00000010649	trip4	97	59.516	Xenopus_tropicalis
MGP_PahariEiJ_G0015235	Trip4	97	56.873	ENSXMAG00000000526	trip4	99	57.732	Xiphophorus_maculatus