EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0015485 (Gene tree)
Gene ID: 110327734
Gene Symbol: Poc1a
Alias: 2510040D07Rik|Wdr51a|cha
Full Name: POC1 centriolar protein A
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 71096 bases
Position: chr10:99454562-99525657
Accession: 110327734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0025189	eIF2A	PF08662.11	2.1e-10	1	1
MGP_PahariEiJ_P0025188	eIF2A	PF08662.11	3.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0025189	-	1244	XM_021206916	MGP_PahariEiJ_P0025189	356 (aa)	XP_021062575	UPI000A3129C5
MGP_PahariEiJ_T0025188	-	1697	XM_021206915	MGP_PahariEiJ_P0025188	405 (aa)	XP_021062574	UPI000A30A704
MGP_PahariEiJ_T0025190	-	1505	-	-	- (aa)	-	-
MGP_PahariEiJ_T0025191	-	757	-	-	- (aa)	-	-
MGP_PahariEiJ_T0025192	-	520	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0015485's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0015485's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0015485	Poc1a	80	30.403	MGP_PahariEiJ_G0014198	Prpf19	55	30.403
MGP_PahariEiJ_G0015485	Poc1a	80	38.000	MGP_PahariEiJ_G0025696	Ciao1	78	38.000
MGP_PahariEiJ_G0015485	Poc1a	81	31.658	MGP_PahariEiJ_G0015101	Wdr61	97	31.658
MGP_PahariEiJ_G0015485	Poc1a	78	32.218	MGP_PahariEiJ_G0015893	Utp15	52	30.348
MGP_PahariEiJ_G0015485	Poc1a	83	33.214	MGP_PahariEiJ_G0016413	Wdr5b	99	34.135
MGP_PahariEiJ_G0015485	Poc1a	67	37.975	MGP_PahariEiJ_G0019766	Dcaf13	57	37.975
MGP_PahariEiJ_G0015485	Poc1a	83	35.659	MGP_PahariEiJ_G0024800	Wdr5	98	30.973
MGP_PahariEiJ_G0015485	Poc1a	94	62.934	MGP_PahariEiJ_G0031323	Poc1b	98	51.701
MGP_PahariEiJ_G0015485	Poc1a	82	30.000	MGP_PahariEiJ_G0028413	Prpf4	56	30.000
MGP_PahariEiJ_G0015485	Poc1a	94	32.716	MGP_PahariEiJ_G0026865	Wdr3	57	32.075

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0015485	Poc1a	100	91.643	ENSG00000164087	POC1A	100	91.643	Homo_sapiens
MGP_PahariEiJ_G0015485	Poc1a	95	79.779	ENSAPOG00000002677	POC1A	98	79.779	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0015485	Poc1a	100	90.663	ENSAMEG00000009136	POC1A	99	90.663	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0015485	Poc1a	94	84.615	ENSACIG00000018288	poc1a	76	84.615	Amphilophus_citrinellus
MGP_PahariEiJ_G0015485	Poc1a	98	78.417	ENSAOCG00000001066	POC1A	97	78.477	Amphiprion_ocellaris
MGP_PahariEiJ_G0015485	Poc1a	97	78.808	ENSAPEG00000005795	poc1a	96	75.581	Amphiprion_percula
MGP_PahariEiJ_G0015485	Poc1a	98	77.861	ENSAPLG00000007756	POC1A	99	77.861	Anas_platyrhynchos
MGP_PahariEiJ_G0015485	Poc1a	100	89.435	ENSANAG00000030897	POC1A	100	89.435	Aotus_nancymaae
MGP_PahariEiJ_G0015485	Poc1a	99	77.273	ENSACLG00000017869	POC1A	98	78.477	Astatotilapia_calliptera
MGP_PahariEiJ_G0015485	Poc1a	96	71.930	ENSAMXG00000024703	poc1a	97	71.930	Astyanax_mexicanus
MGP_PahariEiJ_G0015485	Poc1a	98	90.080	ENSBTAG00000001471	POC1A	100	89.973	Bos_taurus
MGP_PahariEiJ_G0015485	Poc1a	100	90.808	ENSCJAG00000005972	POC1A	100	90.808	Callithrix_jacchus
MGP_PahariEiJ_G0015485	Poc1a	100	83.744	ENSCAFG00020022379	POC1A	100	83.744	Canis_lupus_dingo
MGP_PahariEiJ_G0015485	Poc1a	100	89.681	ENSCHIG00000002571	POC1A	100	89.681	Capra_hircus
MGP_PahariEiJ_G0015485	Poc1a	100	92.758	ENSTSYG00000008302	POC1A	100	92.758	Carlito_syrichta
MGP_PahariEiJ_G0015485	Poc1a	83	93.704	ENSCAPG00000016201	POC1A	89	80.163	Cavia_aperea
MGP_PahariEiJ_G0015485	Poc1a	100	89.944	ENSCPOG00000006740	POC1A	100	89.944	Cavia_porcellus
MGP_PahariEiJ_G0015485	Poc1a	100	89.926	ENSCCAG00000023380	POC1A	100	89.926	Cebus_capucinus
MGP_PahariEiJ_G0015485	Poc1a	100	88.943	ENSCATG00000021822	POC1A	100	88.943	Cercocebus_atys
MGP_PahariEiJ_G0015485	Poc1a	99	85.352	ENSCLAG00000010593	POC1A	99	85.352	Chinchilla_lanigera
MGP_PahariEiJ_G0015485	Poc1a	98	89.431	ENSCSAG00000013862	POC1A	100	89.431	Chlorocebus_sabaeus
MGP_PahariEiJ_G0015485	Poc1a	80	87.085	ENSCPBG00000016728	POC1A	98	87.085	Chrysemys_picta_bellii
MGP_PahariEiJ_G0015485	Poc1a	96	67.173	ENSCSAVG00000008477	-	99	67.173	Ciona_savignyi
MGP_PahariEiJ_G0015485	Poc1a	99	91.573	ENSCANG00000033064	POC1A	99	91.573	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0015485	Poc1a	99	93.239	ENSCGRG00001007357	Poc1a	99	93.239	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0015485	Poc1a	96	68.205	ENSCSEG00000010287	POC1A	94	74.503	Cynoglossus_semilaevis
MGP_PahariEiJ_G0015485	Poc1a	97	66.830	ENSCVAG00000015594	POC1A	97	77.365	Cyprinodon_variegatus
MGP_PahariEiJ_G0015485	Poc1a	87	66.667	ENSEBUG00000002614	POC1A	94	53.763	Eptatretus_burgeri
MGP_PahariEiJ_G0015485	Poc1a	76	59.310	ENSEBUG00000008246	POC1A	60	58.503	Eptatretus_burgeri
MGP_PahariEiJ_G0015485	Poc1a	83	59.459	ENSEBUG00000008013	poc1a	89	59.459	Eptatretus_burgeri
MGP_PahariEiJ_G0015485	Poc1a	97	67.677	ENSELUG00000015504	poc1a	98	67.089	Esox_lucius
MGP_PahariEiJ_G0015485	Poc1a	100	91.922	ENSFCAG00000015704	POC1A	100	91.922	Felis_catus
MGP_PahariEiJ_G0015485	Poc1a	99	74.505	ENSFALG00000008922	POC1A	99	74.505	Ficedula_albicollis
MGP_PahariEiJ_G0015485	Poc1a	100	89.665	ENSFDAG00000011606	POC1A	100	89.665	Fukomys_damarensis
MGP_PahariEiJ_G0015485	Poc1a	98	68.306	ENSFHEG00000015504	POC1A	98	72.897	Fundulus_heteroclitus
MGP_PahariEiJ_G0015485	Poc1a	99	78.470	ENSGALG00000034572	-	98	78.470	Gallus_gallus
MGP_PahariEiJ_G0015485	Poc1a	98	68.657	ENSGACG00000007015	poc1a	97	68.657	Gasterosteus_aculeatus
MGP_PahariEiJ_G0015485	Poc1a	99	77.531	ENSGAGG00000014637	POC1A	99	77.531	Gopherus_agassizii
MGP_PahariEiJ_G0015485	Poc1a	100	91.643	ENSGGOG00000006652	POC1A	100	91.643	Gorilla_gorilla
MGP_PahariEiJ_G0015485	Poc1a	100	90.503	ENSHGLG00000013436	POC1A	100	90.503	Heterocephalus_glaber_female
MGP_PahariEiJ_G0015485	Poc1a	100	89.681	ENSHGLG00100003479	POC1A	100	89.681	Heterocephalus_glaber_male
MGP_PahariEiJ_G0015485	Poc1a	97	67.939	ENSIPUG00000001227	POC1A	96	67.312	Ictalurus_punctatus
MGP_PahariEiJ_G0015485	Poc1a	100	91.899	ENSSTOG00000002638	POC1A	100	91.899	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0015485	Poc1a	100	92.179	ENSJJAG00000018739	Poc1a	100	92.179	Jaculus_jaculus
MGP_PahariEiJ_G0015485	Poc1a	96	82.143	ENSLBEG00000016119	POC1A	97	72.446	Labrus_bergylta
MGP_PahariEiJ_G0015485	Poc1a	100	66.972	ENSLACG00000018788	POC1A	98	78.964	Latimeria_chalumnae
MGP_PahariEiJ_G0015485	Poc1a	97	71.535	ENSLOCG00000013801	poc1a	96	71.535	Lepisosteus_oculatus
MGP_PahariEiJ_G0015485	Poc1a	99	81.592	ENSLAFG00000028434	POC1A	100	87.043	Loxodonta_africana
MGP_PahariEiJ_G0015485	Poc1a	98	88.889	ENSMFAG00000001970	POC1A	100	88.889	Macaca_fascicularis
MGP_PahariEiJ_G0015485	Poc1a	100	88.943	ENSMMUG00000012485	POC1A	100	88.943	Macaca_mulatta
MGP_PahariEiJ_G0015485	Poc1a	98	88.889	ENSMNEG00000042811	POC1A	100	88.889	Macaca_nemestrina
MGP_PahariEiJ_G0015485	Poc1a	100	90.529	ENSMLEG00000039574	POC1A	100	90.529	Mandrillus_leucophaeus
MGP_PahariEiJ_G0015485	Poc1a	95	78.058	ENSMAMG00000014233	POC1A	98	78.058	Mastacembelus_armatus
MGP_PahariEiJ_G0015485	Poc1a	99	77.273	ENSMZEG00005013503	POC1A	98	78.477	Maylandia_zebra
MGP_PahariEiJ_G0015485	Poc1a	95	82.581	ENSMGAG00000001628	POC1A	99	67.562	Meleagris_gallopavo
MGP_PahariEiJ_G0015485	Poc1a	99	95.211	ENSMAUG00000017403	Poc1a	99	95.211	Mesocricetus_auratus
MGP_PahariEiJ_G0015485	Poc1a	100	92.201	ENSMICG00000002709	POC1A	100	92.201	Microcebus_murinus
MGP_PahariEiJ_G0015485	Poc1a	92	94.638	ENSMOCG00000003396	Poc1a	100	94.638	Microtus_ochrogaster
MGP_PahariEiJ_G0015485	Poc1a	98	66.667	ENSMMOG00000010427	poc1a	94	66.667	Mola_mola
MGP_PahariEiJ_G0015485	Poc1a	87	85.437	ENSMODG00000011717	POC1A	96	78.108	Monodelphis_domestica
MGP_PahariEiJ_G0015485	Poc1a	98	72.981	ENSMALG00000009054	poc1a	95	72.981	Monopterus_albus
MGP_PahariEiJ_G0015485	Poc1a	100	98.876	MGP_CAROLIEiJ_G0032617	Poc1a	100	98.876	Mus_caroli
MGP_PahariEiJ_G0015485	Poc1a	100	99.438	ENSMUSG00000023345	Poc1a	100	99.438	Mus_musculus
MGP_PahariEiJ_G0015485	Poc1a	100	99.157	MGP_SPRETEiJ_G0033763	Poc1a	100	99.157	Mus_spretus
MGP_PahariEiJ_G0015485	Poc1a	100	90.909	ENSMPUG00000011723	POC1A	100	90.909	Mustela_putorius_furo
MGP_PahariEiJ_G0015485	Poc1a	99	89.409	ENSMLUG00000015092	POC1A	92	89.409	Myotis_lucifugus
MGP_PahariEiJ_G0015485	Poc1a	100	92.857	ENSNGAG00000005212	Poc1a	100	92.857	Nannospalax_galili
MGP_PahariEiJ_G0015485	Poc1a	97	65.942	ENSNBRG00000022135	poc1a	98	78.188	Neolamprologus_brichardi
MGP_PahariEiJ_G0015485	Poc1a	100	91.086	ENSNLEG00000007084	POC1A	100	91.086	Nomascus_leucogenys
MGP_PahariEiJ_G0015485	Poc1a	91	96.429	ENSMEUG00000007715	-	79	96.429	Notamacropus_eugenii
MGP_PahariEiJ_G0015485	Poc1a	98	86.828	ENSOPRG00000008831	POC1A	91	86.828	Ochotona_princeps
MGP_PahariEiJ_G0015485	Poc1a	99	89.604	ENSODEG00000018290	POC1A	100	89.604	Octodon_degus
MGP_PahariEiJ_G0015485	Poc1a	96	76.299	ENSONIG00000014378	POC1A	98	77.483	Oreochromis_niloticus
MGP_PahariEiJ_G0015485	Poc1a	98	88.889	ENSOCUG00000002080	POC1A	100	88.889	Oryctolagus_cuniculus
MGP_PahariEiJ_G0015485	Poc1a	98	82.143	ENSOMEG00000019834	POC1A	97	61.197	Oryzias_melastigma
MGP_PahariEiJ_G0015485	Poc1a	100	85.122	ENSOGAG00000032245	POC1A	100	85.122	Otolemur_garnettii
MGP_PahariEiJ_G0015485	Poc1a	100	89.926	ENSOARG00000006352	POC1A	100	89.681	Ovis_aries
MGP_PahariEiJ_G0015485	Poc1a	100	91.643	ENSPPAG00000043583	POC1A	100	91.643	Pan_paniscus
MGP_PahariEiJ_G0015485	Poc1a	100	91.922	ENSPPRG00000003365	POC1A	100	91.922	Panthera_pardus
MGP_PahariEiJ_G0015485	Poc1a	98	90.786	ENSPTIG00000005388	POC1A	100	90.786	Panthera_tigris_altaica
MGP_PahariEiJ_G0015485	Poc1a	100	91.643	ENSPTRG00000014989	POC1A	100	91.643	Pan_troglodytes
MGP_PahariEiJ_G0015485	Poc1a	87	84.615	ENSPSIG00000014809	POC1A	91	83.489	Pelodiscus_sinensis
MGP_PahariEiJ_G0015485	Poc1a	96	69.666	ENSPMGG00000005356	poc1a	95	69.666	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0015485	Poc1a	91	93.846	ENSPEMG00000024131	Poc1a	100	93.846	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0015485	Poc1a	87	75.157	ENSPMAG00000000333	poc1a	98	61.388	Petromyzon_marinus
MGP_PahariEiJ_G0015485	Poc1a	99	77.612	ENSPCIG00000018160	POC1A	99	77.612	Phascolarctos_cinereus
MGP_PahariEiJ_G0015485	Poc1a	100	90.172	ENSPPYG00000013816	POC1A	100	90.172	Pongo_abelii
MGP_PahariEiJ_G0015485	Poc1a	100	85.504	ENSPCAG00000002118	POC1A	100	85.504	Procavia_capensis
MGP_PahariEiJ_G0015485	Poc1a	100	93.036	ENSPCOG00000012625	POC1A	100	93.036	Propithecus_coquereli
MGP_PahariEiJ_G0015485	Poc1a	100	71.007	ENSPVAG00000012480	POC1A	100	71.007	Pteropus_vampyrus
MGP_PahariEiJ_G0015485	Poc1a	98	70.426	ENSPNYG00000019517	poc1a	98	70.426	Pundamilia_nyererei
MGP_PahariEiJ_G0015485	Poc1a	98	68.632	ENSPNAG00000007556	POC1A	97	79.612	Pygocentrus_nattereri
MGP_PahariEiJ_G0015485	Poc1a	98	91.848	ENSRNOG00000037295	Poc1a	100	91.848	Rattus_norvegicus
MGP_PahariEiJ_G0015485	Poc1a	100	91.086	ENSRBIG00000031748	POC1A	100	91.086	Rhinopithecus_bieti
MGP_PahariEiJ_G0015485	Poc1a	100	91.086	ENSRROG00000044472	POC1A	100	91.086	Rhinopithecus_roxellana
MGP_PahariEiJ_G0015485	Poc1a	100	89.315	ENSSBOG00000027902	POC1A	100	90.244	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0015485	Poc1a	94	82.143	ENSSMAG00000013505	POC1A	96	68.473	Scophthalmus_maximus
MGP_PahariEiJ_G0015485	Poc1a	94	82.143	ENSSDUG00000016161	POC1A	97	63.656	Seriola_dumerili
MGP_PahariEiJ_G0015485	Poc1a	94	82.143	ENSSLDG00000003828	POC1A	97	78.146	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0015485	Poc1a	93	83.456	ENSSPUG00000008656	POC1A	99	83.456	Sphenodon_punctatus
MGP_PahariEiJ_G0015485	Poc1a	98	59.305	ENSSPAG00000020330	POC1A	93	59.305	Stegastes_partitus
MGP_PahariEiJ_G0015485	Poc1a	100	89.189	ENSSSCG00000011426	POC1A	100	89.189	Sus_scrofa
MGP_PahariEiJ_G0015485	Poc1a	98	73.737	ENSTGUG00000006036	POC1A	99	73.737	Taeniopygia_guttata
MGP_PahariEiJ_G0015485	Poc1a	96	65.449	ENSTRUG00000007900	POC1A	96	65.449	Takifugu_rubripes
MGP_PahariEiJ_G0015485	Poc1a	85	72.517	ENSTNIG00000014818	POC1A	98	72.517	Tetraodon_nigroviridis
MGP_PahariEiJ_G0015485	Poc1a	100	87.224	ENSTTRG00000016798	POC1A	100	87.224	Tursiops_truncatus
MGP_PahariEiJ_G0015485	Poc1a	100	90.663	ENSUAMG00000020816	POC1A	100	90.663	Ursus_americanus
MGP_PahariEiJ_G0015485	Poc1a	98	90.786	ENSUMAG00000021482	POC1A	100	90.786	Ursus_maritimus
MGP_PahariEiJ_G0015485	Poc1a	87	76.623	ENSXETG00000010813	poc1a	98	63.596	Xenopus_tropicalis