EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0015676 (Gene tree)
Gene ID: 110327992
Gene Symbol: Ttc21a
Alias: 4921538N17Rik|Thm2
Full Name: tetratricopeptide repeat domain 21A
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 32923 bases
Position: chr10:112824545-112857467
Accession: 110327992
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0026252	PPR	PF01535.20	5.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0026254	-	3320	-	-	- (aa)	-	-
MGP_PahariEiJ_T0026255	-	840	-	-	- (aa)	-	-
MGP_PahariEiJ_T0026252	-	4181	XM_021207316	MGP_PahariEiJ_P0026252	1314 (aa)	XP_021062975	UPI000A3098E7
MGP_PahariEiJ_T0026253	-	4040	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0015676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0015676's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0015676	Ttc21a	55	82.207	ENSBTAG00000010477	TTC21A	100	82.207	Bos_taurus
MGP_PahariEiJ_G0015676	Ttc21a	55	82.759	ENSCHIG00000018055	TTC21A	100	82.759	Capra_hircus
MGP_PahariEiJ_G0015676	Ttc21a	99	89.051	ENSCGRG00001020151	Ttc21a	100	89.051	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0015676	Ttc21a	99	89.051	ENSCGRG00000012945	Ttc21a	95	89.051	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0015676	Ttc21a	99	69.290	ENSDORG00000027538	Ttc21a	99	69.290	Dipodomys_ordii
MGP_PahariEiJ_G0015676	Ttc21a	87	75.762	ENSETEG00000018753	TTC21A	87	75.762	Echinops_telfairi
MGP_PahariEiJ_G0015676	Ttc21a	100	82.738	ENSJJAG00000005140	Ttc21a	100	82.738	Jaculus_jaculus
MGP_PahariEiJ_G0015676	Ttc21a	100	96.347	ENSMUSG00000032514	Ttc21a	100	96.347	Mus_musculus
MGP_PahariEiJ_G0015676	Ttc21a	100	96.347	MGP_SPRETEiJ_G0033957	Ttc21a	100	96.347	Mus_spretus
MGP_PahariEiJ_G0015676	Ttc21a	100	75.571	ENSPPRG00000012924	TTC21A	100	75.571	Panthera_pardus
MGP_PahariEiJ_G0015676	Ttc21a	99	90.937	ENSPEMG00000010809	Ttc21a	99	90.937	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0015676	Ttc21a	100	95.129	ENSRNOG00000034089	Ttc21a	100	95.129	Rattus_norvegicus
MGP_PahariEiJ_G0015676	Ttc21a	100	77.719	ENSUAMG00000020073	TTC21A	99	84.256	Ursus_americanus