EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0015818 (Gene tree)
Gene ID: 110328861
Gene Symbol: Fam172a
Alias: 1110033M05Rik|2610318O14Rik|53-E6|9430037D06Rik|pEN87
Full Name: family with sequence similarity 172 member A
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 393775 bases
Position: chr11:9473982-9867756
Accession: 110328861
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0026611	Arb2	PF09757.9	5.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0026611	-	3671	XM_021208356	MGP_PahariEiJ_P0026611	306 (aa)	XP_021064015	UPI000A312ACF
MGP_PahariEiJ_T0026612	-	3987	XM_021208354	MGP_PahariEiJ_P0026612	416 (aa)	XP_021064013	UPI000A308B29
MGP_PahariEiJ_T0026613	-	3863	XM_021208355	MGP_PahariEiJ_P0026613	370 (aa)	XP_021064014	UPI000A311DB3

Gene Model

Click here to download MGP_PahariEiJ_G0015818's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0015818's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0015818	Fam172a	100	94.937	ENSG00000113391	FAM172A	100	93.791	Homo_sapiens
MGP_PahariEiJ_G0015818	Fam172a	73	37.118	ENSAPLG00000011555	-	96	37.118	Anas_platyrhynchos
MGP_PahariEiJ_G0015818	Fam172a	100	84.810	ENSAPLG00000004055	FAM172A	75	84.810	Anas_platyrhynchos
MGP_PahariEiJ_G0015818	Fam172a	88	87.342	ENSACAG00000013305	FAM172A	71	87.342	Anolis_carolinensis
MGP_PahariEiJ_G0015818	Fam172a	85	87.374	ENSANAG00000035869	FAM172A	86	89.302	Aotus_nancymaae
MGP_PahariEiJ_G0015818	Fam172a	100	96.203	ENSBTAG00000050195	FAM172A	75	96.203	Bos_taurus
MGP_PahariEiJ_G0015818	Fam172a	100	65.676	ENSCJAG00000010444	FAM172A	89	65.676	Callithrix_jacchus
MGP_PahariEiJ_G0015818	Fam172a	85	96.203	ENSCAFG00000008064	FAM172A	71	96.203	Canis_familiaris
MGP_PahariEiJ_G0015818	Fam172a	100	96.203	ENSCAFG00020006210	FAM172A	75	96.203	Canis_lupus_dingo
MGP_PahariEiJ_G0015818	Fam172a	100	96.203	ENSCHIG00000008440	FAM172A	75	96.203	Capra_hircus
MGP_PahariEiJ_G0015818	Fam172a	60	91.351	ENSTSYG00000006286	FAM172A	59	91.351	Carlito_syrichta
MGP_PahariEiJ_G0015818	Fam172a	63	95.000	ENSCAPG00000014103	-	100	95.000	Cavia_aperea
MGP_PahariEiJ_G0015818	Fam172a	100	65.405	ENSCCAG00000023116	FAM172A	100	65.405	Cebus_capucinus
MGP_PahariEiJ_G0015818	Fam172a	100	94.937	ENSCLAG00000005472	FAM172A	100	83.333	Chinchilla_lanigera
MGP_PahariEiJ_G0015818	Fam172a	93	34.862	ENSCPBG00000004402	-	92	34.862	Chrysemys_picta_bellii
MGP_PahariEiJ_G0015818	Fam172a	67	92.473	ENSCANG00000040412	FAM172A	72	92.473	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0015818	Fam172a	100	94.937	ENSDNOG00000004689	FAM172A	75	94.937	Dasypus_novemcinctus
MGP_PahariEiJ_G0015818	Fam172a	61	92.473	ENSDORG00000013558	Fam172a	61	92.473	Dipodomys_ordii
MGP_PahariEiJ_G0015818	Fam172a	87	30.061	ENSEBUG00000016097	-	62	30.061	Eptatretus_burgeri
MGP_PahariEiJ_G0015818	Fam172a	100	93.671	ENSECAG00000018274	FAM172A	75	93.671	Equus_caballus
MGP_PahariEiJ_G0015818	Fam172a	89	90.948	ENSEEUG00000002887	FAM172A	66	90.948	Erinaceus_europaeus
MGP_PahariEiJ_G0015818	Fam172a	99	78.481	ENSELUG00000017647	fam172a	73	78.481	Esox_lucius
MGP_PahariEiJ_G0015818	Fam172a	100	96.203	ENSFCAG00000025443	FAM172A	75	96.203	Felis_catus
MGP_PahariEiJ_G0015818	Fam172a	85	86.631	ENSFALG00000009072	FAM172A	66	86.631	Ficedula_albicollis
MGP_PahariEiJ_G0015818	Fam172a	95	34.954	ENSFALG00000006501	-	100	31.118	Ficedula_albicollis
MGP_PahariEiJ_G0015818	Fam172a	100	85.776	ENSGALG00000014661	FAM172A	75	85.776	Gallus_gallus
MGP_PahariEiJ_G0015818	Fam172a	100	61.892	ENSGAGG00000003839	FAM172A	89	61.892	Gopherus_agassizii
MGP_PahariEiJ_G0015818	Fam172a	92	55.385	ENSGAGG00000022828	-	73	55.385	Gopherus_agassizii
MGP_PahariEiJ_G0015818	Fam172a	100	96.203	ENSGGOG00000010296	FAM172A	75	96.203	Gorilla_gorilla
MGP_PahariEiJ_G0015818	Fam172a	100	93.671	ENSHGLG00000011178	FAM172A	100	91.176	Heterocephalus_glaber_female
MGP_PahariEiJ_G0015818	Fam172a	85	93.671	ENSHGLG00100013340	FAM172A	100	92.664	Heterocephalus_glaber_male
MGP_PahariEiJ_G0015818	Fam172a	100	66.486	ENSSTOG00000009918	FAM172A	89	66.486	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0015818	Fam172a	97	39.595	ENSLACG00000001532	si:ch73-41e3.7	97	39.595	Latimeria_chalumnae
MGP_PahariEiJ_G0015818	Fam172a	100	52.279	ENSLOCG00000001629	fam172a	89	52.279	Lepisosteus_oculatus
MGP_PahariEiJ_G0015818	Fam172a	61	92.473	ENSMFAG00000001171	FAM172A	72	92.473	Macaca_fascicularis
MGP_PahariEiJ_G0015818	Fam172a	100	96.203	ENSMNEG00000039938	FAM172A	72	92.473	Macaca_nemestrina
MGP_PahariEiJ_G0015818	Fam172a	50	43.312	ENSMGAG00000016079	-	74	43.312	Meleagris_gallopavo
MGP_PahariEiJ_G0015818	Fam172a	100	96.203	ENSMICG00000030403	FAM172A	75	96.203	Microcebus_murinus
MGP_PahariEiJ_G0015818	Fam172a	100	93.671	ENSMOCG00000003613	Fam172a	84	93.671	Microtus_ochrogaster
MGP_PahariEiJ_G0015818	Fam172a	100	89.873	ENSMODG00000020131	FAM172A	75	89.873	Monodelphis_domestica
MGP_PahariEiJ_G0015818	Fam172a	100	94.937	ENSNGAG00000019570	Fam172a	84	94.937	Nannospalax_galili
MGP_PahariEiJ_G0015818	Fam172a	68	91.979	ENSNLEG00000013903	FAM172A	70	91.979	Nomascus_leucogenys
MGP_PahariEiJ_G0015818	Fam172a	85	58.642	ENSOANG00000011068	FAM172A	87	58.642	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0015818	Fam172a	96	96.203	ENSOCUG00000007299	FAM172A	71	96.203	Oryctolagus_cuniculus
MGP_PahariEiJ_G0015818	Fam172a	100	73.784	ENSOGAG00000015189	FAM172A	89	73.784	Otolemur_garnettii
MGP_PahariEiJ_G0015818	Fam172a	89	96.203	ENSOARG00000016711	FAM172A	63	96.203	Ovis_aries
MGP_PahariEiJ_G0015818	Fam172a	67	91.935	ENSPPAG00000030542	FAM172A	72	91.935	Pan_paniscus
MGP_PahariEiJ_G0015818	Fam172a	100	96.203	ENSPPRG00000006653	FAM172A	75	96.203	Panthera_pardus
MGP_PahariEiJ_G0015818	Fam172a	100	96.203	ENSPTIG00000012681	FAM172A	75	96.203	Panthera_tigris_altaica
MGP_PahariEiJ_G0015818	Fam172a	67	91.935	ENSPTRG00000017074	FAM172A	72	91.935	Pan_troglodytes
MGP_PahariEiJ_G0015818	Fam172a	67	92.473	ENSPANG00000011687	FAM172A	72	92.473	Papio_anubis
MGP_PahariEiJ_G0015818	Fam172a	100	67.742	ENSPKIG00000012314	fam172a	87	67.419	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0015818	Fam172a	52	91.875	ENSPSIG00000010144	-	100	91.875	Pelodiscus_sinensis
MGP_PahariEiJ_G0015818	Fam172a	100	96.732	ENSPEMG00000009604	-	100	96.732	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0015818	Fam172a	100	91.139	ENSPCIG00000028612	FAM172A	75	91.139	Phascolarctos_cinereus
MGP_PahariEiJ_G0015818	Fam172a	77	91.064	ENSPCOG00000024072	FAM172A	95	91.064	Propithecus_coquereli
MGP_PahariEiJ_G0015818	Fam172a	67	96.216	ENSRNOG00000013844	Fam172a	77	96.216	Rattus_norvegicus
MGP_PahariEiJ_G0015818	Fam172a	58	90.341	ENSRBIG00000028680	-	78	90.341	Rhinopithecus_bieti
MGP_PahariEiJ_G0015818	Fam172a	67	92.473	ENSRROG00000023807	FAM172A	72	92.473	Rhinopithecus_roxellana
MGP_PahariEiJ_G0015818	Fam172a	100	65.405	ENSSBOG00000019860	FAM172A	89	65.405	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0015818	Fam172a	100	88.608	ENSSHAG00000013743	FAM172A	75	88.608	Sarcophilus_harrisii
MGP_PahariEiJ_G0015818	Fam172a	100	86.076	ENSSPUG00000008161	FAM172A	74	86.076	Sphenodon_punctatus
MGP_PahariEiJ_G0015818	Fam172a	100	96.203	ENSSSCG00000027608	FAM172A	84	96.203	Sus_scrofa
MGP_PahariEiJ_G0015818	Fam172a	88	60.656	ENSTGUG00000013623	-	83	60.656	Taeniopygia_guttata
MGP_PahariEiJ_G0015818	Fam172a	76	83.621	ENSTGUG00000000715	FAM172A	61	83.621	Taeniopygia_guttata
MGP_PahariEiJ_G0015818	Fam172a	77	79.747	ENSTNIG00000009902	fam172a	76	79.747	Tetraodon_nigroviridis
MGP_PahariEiJ_G0015818	Fam172a	100	91.139	ENSTTRG00000001521	FAM172A	75	91.139	Tursiops_truncatus
MGP_PahariEiJ_G0015818	Fam172a	100	96.203	ENSUMAG00000005442	FAM172A	75	96.203	Ursus_maritimus
MGP_PahariEiJ_G0015818	Fam172a	100	96.203	ENSVVUG00000022112	FAM172A	75	96.203	Vulpes_vulpes
MGP_PahariEiJ_G0015818	Fam172a	100	64.151	ENSXETG00000011592	fam172a	88	64.151	Xenopus_tropicalis
MGP_PahariEiJ_G0015818	Fam172a	96	39.118	ENSXETG00000033027	-	93	39.118	Xenopus_tropicalis