EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0015904 (Gene tree)
Gene ID: 110329077
Gene Symbol: Ptcd2
Alias: 1190005P08Rik
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 22439 bases
Position: chr11:30411129-30433567
Accession: 110329077
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0026919	MRP-S27	PF10037.9	1.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0026919	-	1642	XM_021208632	MGP_PahariEiJ_P0026919	381 (aa)	XP_021064291	UPI000A3121F3

Gene Model

Click here to download MGP_PahariEiJ_G0015904's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0015904's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0015904	Ptcd2	100	76.240	ENSG00000049883	PTCD2	100	78.325	Homo_sapiens
MGP_PahariEiJ_G0015904	Ptcd2	91	48.276	ENSAPOG00000020682	ptcd2	91	48.276	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0015904	Ptcd2	100	73.368	ENSAMEG00000007194	PTCD2	99	73.368	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0015904	Ptcd2	91	42.407	ENSACIG00000002053	ptcd2	100	42.407	Amphilophus_citrinellus
MGP_PahariEiJ_G0015904	Ptcd2	91	47.126	ENSAOCG00000006616	ptcd2	89	47.126	Amphiprion_ocellaris
MGP_PahariEiJ_G0015904	Ptcd2	91	47.564	ENSAPEG00000022926	ptcd2	89	47.564	Amphiprion_percula
MGP_PahariEiJ_G0015904	Ptcd2	93	57.062	ENSACAG00000009747	PTCD2	91	57.062	Anolis_carolinensis
MGP_PahariEiJ_G0015904	Ptcd2	100	75.196	ENSANAG00000029353	PTCD2	99	75.196	Aotus_nancymaae
MGP_PahariEiJ_G0015904	Ptcd2	91	45.690	ENSACLG00000027742	ptcd2	89	45.690	Astatotilapia_calliptera
MGP_PahariEiJ_G0015904	Ptcd2	86	46.341	ENSAMXG00000029404	ptcd2	88	46.341	Astyanax_mexicanus
MGP_PahariEiJ_G0015904	Ptcd2	100	73.438	ENSBTAG00000014675	PTCD2	100	73.438	Bos_taurus
MGP_PahariEiJ_G0015904	Ptcd2	100	74.151	ENSCJAG00000016364	PTCD2	99	74.151	Callithrix_jacchus
MGP_PahariEiJ_G0015904	Ptcd2	100	73.368	ENSCAFG00000007982	PTCD2	90	73.368	Canis_familiaris
MGP_PahariEiJ_G0015904	Ptcd2	91	74.277	ENSCAFG00020019147	PTCD2	97	74.277	Canis_lupus_dingo
MGP_PahariEiJ_G0015904	Ptcd2	100	74.740	ENSCHIG00000017118	PTCD2	100	74.740	Capra_hircus
MGP_PahariEiJ_G0015904	Ptcd2	100	71.018	ENSCPOG00000040168	PTCD2	100	71.018	Cavia_porcellus
MGP_PahariEiJ_G0015904	Ptcd2	100	74.151	ENSCCAG00000029389	-	99	74.151	Cebus_capucinus
MGP_PahariEiJ_G0015904	Ptcd2	81	70.130	ENSCCAG00000021996	-	95	70.130	Cebus_capucinus
MGP_PahariEiJ_G0015904	Ptcd2	100	75.196	ENSCATG00000019069	PTCD2	100	75.196	Cercocebus_atys
MGP_PahariEiJ_G0015904	Ptcd2	97	75.202	ENSCLAG00000000072	PTCD2	97	75.202	Chinchilla_lanigera
MGP_PahariEiJ_G0015904	Ptcd2	100	74.935	ENSCSAG00000015623	PTCD2	100	74.935	Chlorocebus_sabaeus
MGP_PahariEiJ_G0015904	Ptcd2	74	73.529	ENSCHOG00000010634	PTCD2	82	73.529	Choloepus_hoffmanni
MGP_PahariEiJ_G0015904	Ptcd2	94	55.710	ENSCPBG00000000216	PTCD2	92	55.710	Chrysemys_picta_bellii
MGP_PahariEiJ_G0015904	Ptcd2	100	73.629	ENSCANG00000035636	PTCD2	99	73.629	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0015904	Ptcd2	100	82.152	ENSCGRG00001015289	Ptcd2	84	82.152	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0015904	Ptcd2	100	82.152	ENSCGRG00000006193	Ptcd2	84	82.152	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0015904	Ptcd2	91	46.264	ENSCVAG00000001285	ptcd2	89	46.264	Cyprinodon_variegatus
MGP_PahariEiJ_G0015904	Ptcd2	93	46.910	ENSDARG00000035391	ptcd2	93	46.910	Danio_rerio
MGP_PahariEiJ_G0015904	Ptcd2	100	70.757	ENSDNOG00000008719	PTCD2	100	70.757	Dasypus_novemcinctus
MGP_PahariEiJ_G0015904	Ptcd2	100	73.902	ENSDORG00000004921	Ptcd2	100	73.902	Dipodomys_ordii
MGP_PahariEiJ_G0015904	Ptcd2	100	65.625	ENSETEG00000016542	PTCD2	99	65.625	Echinops_telfairi
MGP_PahariEiJ_G0015904	Ptcd2	100	75.131	ENSEASG00005018038	PTCD2	100	75.131	Equus_asinus_asinus
MGP_PahariEiJ_G0015904	Ptcd2	100	75.131	ENSECAG00000007022	PTCD2	98	75.131	Equus_caballus
MGP_PahariEiJ_G0015904	Ptcd2	100	67.363	ENSEEUG00000014031	PTCD2	99	67.363	Erinaceus_europaeus
MGP_PahariEiJ_G0015904	Ptcd2	93	49.153	ENSELUG00000003584	ptcd2	92	49.153	Esox_lucius
MGP_PahariEiJ_G0015904	Ptcd2	96	69.863	ENSFCAG00000045432	PTCD2	78	69.863	Felis_catus
MGP_PahariEiJ_G0015904	Ptcd2	86	49.235	ENSFALG00000010299	PTCD2	99	49.235	Ficedula_albicollis
MGP_PahariEiJ_G0015904	Ptcd2	100	73.368	ENSFDAG00000018461	PTCD2	100	73.368	Fukomys_damarensis
MGP_PahariEiJ_G0015904	Ptcd2	91	49.288	ENSGMOG00000003637	ptcd2	91	49.288	Gadus_morhua
MGP_PahariEiJ_G0015904	Ptcd2	93	48.023	ENSGALG00000038260	PTCD2	93	48.023	Gallus_gallus
MGP_PahariEiJ_G0015904	Ptcd2	93	59.322	ENSGAGG00000021952	PTCD2	91	59.322	Gopherus_agassizii
MGP_PahariEiJ_G0015904	Ptcd2	100	75.979	ENSGGOG00000010695	PTCD2	99	75.979	Gorilla_gorilla
MGP_PahariEiJ_G0015904	Ptcd2	91	45.690	ENSHBUG00000009191	ptcd2	89	45.690	Haplochromis_burtoni
MGP_PahariEiJ_G0015904	Ptcd2	100	72.324	ENSHGLG00000001234	PTCD2	100	72.324	Heterocephalus_glaber_female
MGP_PahariEiJ_G0015904	Ptcd2	100	72.324	ENSHGLG00100015419	PTCD2	100	72.324	Heterocephalus_glaber_male
MGP_PahariEiJ_G0015904	Ptcd2	95	48.077	ENSHCOG00000001703	ptcd2	92	48.077	Hippocampus_comes
MGP_PahariEiJ_G0015904	Ptcd2	88	45.970	ENSIPUG00000006080	ptcd2	91	46.132	Ictalurus_punctatus
MGP_PahariEiJ_G0015904	Ptcd2	99	75.853	ENSSTOG00000006596	PTCD2	99	75.853	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0015904	Ptcd2	100	75.979	ENSJJAG00000024388	Ptcd2	100	75.979	Jaculus_jaculus
MGP_PahariEiJ_G0015904	Ptcd2	95	43.646	ENSKMAG00000009329	ptcd2	93	43.646	Kryptolebias_marmoratus
MGP_PahariEiJ_G0015904	Ptcd2	97	45.576	ENSLBEG00000024871	ptcd2	94	45.576	Labrus_bergylta
MGP_PahariEiJ_G0015904	Ptcd2	100	52.618	ENSLOCG00000011122	ptcd2	99	52.618	Lepisosteus_oculatus
MGP_PahariEiJ_G0015904	Ptcd2	81	73.633	ENSLAFG00000004115	PTCD2	100	73.633	Loxodonta_africana
MGP_PahariEiJ_G0015904	Ptcd2	100	74.935	ENSMFAG00000031516	PTCD2	99	74.935	Macaca_fascicularis
MGP_PahariEiJ_G0015904	Ptcd2	100	74.935	ENSMNEG00000007537	PTCD2	100	74.935	Macaca_nemestrina
MGP_PahariEiJ_G0015904	Ptcd2	100	75.457	ENSMLEG00000031093	PTCD2	99	75.457	Mandrillus_leucophaeus
MGP_PahariEiJ_G0015904	Ptcd2	96	47.397	ENSMAMG00000018529	ptcd2	94	47.397	Mastacembelus_armatus
MGP_PahariEiJ_G0015904	Ptcd2	91	45.690	ENSMZEG00005003625	ptcd2	89	45.690	Maylandia_zebra
MGP_PahariEiJ_G0015904	Ptcd2	91	49.425	ENSMGAG00000005033	PTCD2	100	49.425	Meleagris_gallopavo
MGP_PahariEiJ_G0015904	Ptcd2	100	67.192	ENSMAUG00000020253	Ptcd2	100	67.192	Mesocricetus_auratus
MGP_PahariEiJ_G0015904	Ptcd2	100	75.196	ENSMICG00000004535	PTCD2	99	75.196	Microcebus_murinus
MGP_PahariEiJ_G0015904	Ptcd2	100	84.252	ENSMOCG00000019985	Ptcd2	100	84.252	Microtus_ochrogaster
MGP_PahariEiJ_G0015904	Ptcd2	93	57.910	ENSMODG00000001695	PTCD2	92	57.910	Monodelphis_domestica
MGP_PahariEiJ_G0015904	Ptcd2	91	47.414	ENSMALG00000022372	ptcd2	91	47.414	Monopterus_albus
MGP_PahariEiJ_G0015904	Ptcd2	100	93.963	MGP_CAROLIEiJ_G0018829	Ptcd2	100	93.963	Mus_caroli
MGP_PahariEiJ_G0015904	Ptcd2	100	92.913	ENSMUSG00000021650	Ptcd2	100	92.913	Mus_musculus
MGP_PahariEiJ_G0015904	Ptcd2	100	92.913	MGP_SPRETEiJ_G0019711	Ptcd2	100	92.913	Mus_spretus
MGP_PahariEiJ_G0015904	Ptcd2	97	76.550	ENSMPUG00000014401	PTCD2	97	76.550	Mustela_putorius_furo
MGP_PahariEiJ_G0015904	Ptcd2	100	72.846	ENSMLUG00000007374	PTCD2	99	72.846	Myotis_lucifugus
MGP_PahariEiJ_G0015904	Ptcd2	100	78.329	ENSNGAG00000005027	Ptcd2	100	78.329	Nannospalax_galili
MGP_PahariEiJ_G0015904	Ptcd2	87	45.152	ENSNBRG00000000092	-	100	45.152	Neolamprologus_brichardi
MGP_PahariEiJ_G0015904	Ptcd2	91	45.977	ENSNBRG00000008174	ptcd2	91	45.977	Neolamprologus_brichardi
MGP_PahariEiJ_G0015904	Ptcd2	100	74.674	ENSNLEG00000004516	PTCD2	99	74.674	Nomascus_leucogenys
MGP_PahariEiJ_G0015904	Ptcd2	100	44.186	ENSMEUG00000014012	-	99	44.186	Notamacropus_eugenii
MGP_PahariEiJ_G0015904	Ptcd2	100	72.063	ENSOPRG00000007290	PTCD2	99	72.063	Ochotona_princeps
MGP_PahariEiJ_G0015904	Ptcd2	100	74.674	ENSODEG00000016417	PTCD2	100	74.674	Octodon_degus
MGP_PahariEiJ_G0015904	Ptcd2	76	48.611	ENSONIG00000011269	ptcd2	84	48.611	Oreochromis_niloticus
MGP_PahariEiJ_G0015904	Ptcd2	96	75.616	ENSOCUG00000007970	PTCD2	100	74.935	Oryctolagus_cuniculus
MGP_PahariEiJ_G0015904	Ptcd2	91	47.688	ENSORLG00000003851	ptcd2	88	47.688	Oryzias_latipes
MGP_PahariEiJ_G0015904	Ptcd2	91	46.821	ENSORLG00020009823	ptcd2	90	46.821	Oryzias_latipes_hni
MGP_PahariEiJ_G0015904	Ptcd2	91	47.399	ENSORLG00015016777	ptcd2	99	47.399	Oryzias_latipes_hsok
MGP_PahariEiJ_G0015904	Ptcd2	94	44.722	ENSOMEG00000012396	ptcd2	86	44.722	Oryzias_melastigma
MGP_PahariEiJ_G0015904	Ptcd2	100	72.324	ENSOGAG00000008390	PTCD2	99	72.324	Otolemur_garnettii
MGP_PahariEiJ_G0015904	Ptcd2	100	73.958	ENSOARG00000005087	PTCD2	99	73.958	Ovis_aries
MGP_PahariEiJ_G0015904	Ptcd2	100	75.979	ENSPPAG00000028480	PTCD2	99	75.979	Pan_paniscus
MGP_PahariEiJ_G0015904	Ptcd2	100	76.240	ENSPTRG00000016968	PTCD2	99	76.240	Pan_troglodytes
MGP_PahariEiJ_G0015904	Ptcd2	91	77.101	ENSPANG00000006611	PTCD2	89	77.101	Papio_anubis
MGP_PahariEiJ_G0015904	Ptcd2	93	49.157	ENSPKIG00000019896	ptcd2	93	49.157	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0015904	Ptcd2	83	59.177	ENSPSIG00000014559	PTCD2	98	59.177	Pelodiscus_sinensis
MGP_PahariEiJ_G0015904	Ptcd2	100	81.984	ENSPEMG00000000884	Ptcd2	100	81.984	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0015904	Ptcd2	100	56.250	ENSPCIG00000029047	PTCD2	100	56.250	Phascolarctos_cinereus
MGP_PahariEiJ_G0015904	Ptcd2	91	45.402	ENSPLAG00000010456	ptcd2	91	45.402	Poecilia_latipinna
MGP_PahariEiJ_G0015904	Ptcd2	91	45.402	ENSPREG00000021797	ptcd2	88	45.402	Poecilia_reticulata
MGP_PahariEiJ_G0015904	Ptcd2	100	65.535	ENSPPYG00000015543	PTCD2	99	65.535	Pongo_abelii
MGP_PahariEiJ_G0015904	Ptcd2	76	64.931	ENSPCAG00000006806	PTCD2	92	64.931	Procavia_capensis
MGP_PahariEiJ_G0015904	Ptcd2	100	70.496	ENSPVAG00000010935	PTCD2	99	70.496	Pteropus_vampyrus
MGP_PahariEiJ_G0015904	Ptcd2	91	45.690	ENSPNYG00000003122	ptcd2	89	45.690	Pundamilia_nyererei
MGP_PahariEiJ_G0015904	Ptcd2	93	48.883	ENSPNAG00000021490	ptcd2	93	49.162	Pygocentrus_nattereri
MGP_PahariEiJ_G0015904	Ptcd2	100	88.189	ENSRNOG00000028403	Ptcd2	100	88.189	Rattus_norvegicus
MGP_PahariEiJ_G0015904	Ptcd2	100	70.496	ENSRBIG00000032929	PTCD2	99	70.496	Rhinopithecus_bieti
MGP_PahariEiJ_G0015904	Ptcd2	100	74.674	ENSRROG00000000080	PTCD2	100	74.674	Rhinopithecus_roxellana
MGP_PahariEiJ_G0015904	Ptcd2	100	73.890	ENSSBOG00000018911	PTCD2	100	73.890	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0015904	Ptcd2	94	57.821	ENSSHAG00000003833	PTCD2	93	57.821	Sarcophilus_harrisii
MGP_PahariEiJ_G0015904	Ptcd2	92	44.857	ENSSFOG00015015415	ptcd2	91	44.857	Scleropages_formosus
MGP_PahariEiJ_G0015904	Ptcd2	91	44.380	ENSSMAG00000010350	ptcd2	90	44.380	Scophthalmus_maximus
MGP_PahariEiJ_G0015904	Ptcd2	91	49.280	ENSSDUG00000008142	ptcd2	87	49.280	Seriola_dumerili
MGP_PahariEiJ_G0015904	Ptcd2	91	48.991	ENSSLDG00000015284	ptcd2	91	48.991	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0015904	Ptcd2	81	64.725	ENSSARG00000004983	PTCD2	99	64.725	Sorex_araneus
MGP_PahariEiJ_G0015904	Ptcd2	93	51.685	ENSSPUG00000000176	PTCD2	90	51.685	Sphenodon_punctatus
MGP_PahariEiJ_G0015904	Ptcd2	91	47.126	ENSSPAG00000008591	ptcd2	89	47.126	Stegastes_partitus
MGP_PahariEiJ_G0015904	Ptcd2	100	74.803	ENSSSCG00000016975	PTCD2	90	74.803	Sus_scrofa
MGP_PahariEiJ_G0015904	Ptcd2	91	50.145	ENSTGUG00000005705	PTCD2	99	50.145	Taeniopygia_guttata
MGP_PahariEiJ_G0015904	Ptcd2	100	71.018	ENSTBEG00000016559	PTCD2	99	71.018	Tupaia_belangeri
MGP_PahariEiJ_G0015904	Ptcd2	100	73.698	ENSTTRG00000011851	PTCD2	99	73.698	Tursiops_truncatus
MGP_PahariEiJ_G0015904	Ptcd2	97	74.394	ENSUAMG00000007583	PTCD2	87	74.394	Ursus_americanus
MGP_PahariEiJ_G0015904	Ptcd2	97	74.124	ENSUMAG00000007666	PTCD2	97	74.124	Ursus_maritimus
MGP_PahariEiJ_G0015904	Ptcd2	100	73.177	ENSVPAG00000009597	PTCD2	99	73.177	Vicugna_pacos
MGP_PahariEiJ_G0015904	Ptcd2	100	73.890	ENSVVUG00000007299	-	100	73.890	Vulpes_vulpes
MGP_PahariEiJ_G0015904	Ptcd2	94	54.318	ENSXETG00000031652	PTCD2	94	54.318	Xenopus_tropicalis
MGP_PahariEiJ_G0015904	Ptcd2	91	45.115	ENSXMAG00000005940	ptcd2	82	45.115	Xiphophorus_maculatus