EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_PahariEiJ_G0015911 (Gene tree)
Gene ID
110329003
Gene Symbol
Smn1
Alias
SMN
Full Name
survival of motor neuron 1%2C telomeric
Gene Type
protein_coding
Species
Mus_pahari
Status
putative
Strand
Plus strand
Length
11536 bases
Position
chr11:31209970-31221505
Accession
110329003
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_PahariEiJ_P0026936SMNPF06003.127.8e-10611
MGP_PahariEiJ_P0026940SMNPF06003.121.5e-4211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_PahariEiJ_T0026939-221-MGP_PahariEiJ_P002693939 (aa)--
MGP_PahariEiJ_T0026938-420-MGP_PahariEiJ_P002693845 (aa)--
MGP_PahariEiJ_T0026942-542--- (aa)--
MGP_PahariEiJ_T0026943-631--- (aa)--
MGP_PahariEiJ_T0026944-404--- (aa)--
MGP_PahariEiJ_T0026941-611--- (aa)--
MGP_PahariEiJ_T0026940-479-MGP_PahariEiJ_P0026940159 (aa)--
MGP_PahariEiJ_T0026937-437--- (aa)--
MGP_PahariEiJ_T0026936-1214XM_021208531MGP_PahariEiJ_P0026936286 (aa)XP_021064190UPI000A3133FD
Gene Model
Click here to download MGP_PahariEiJ_G0015911's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0015911's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_PahariEiJ_G0015911Smn19679.570ENSG00000172062SMN19980.220Homo_sapiens
MGP_PahariEiJ_G0015911Smn19679.570ENSG00000205571SMN29980.220Homo_sapiens
MGP_PahariEiJ_G0015911Smn19354.945ENSAPOG00000011324smn19454.275Acanthochromis_polyacanthus
MGP_PahariEiJ_G0015911Smn19781.720ENSAMEG00000003316-9680.969Ailuropoda_melanoleuca
MGP_PahariEiJ_G0015911Smn15356.494ENSACIG00000007598smn18958.442Amphilophus_citrinellus
MGP_PahariEiJ_G0015911Smn18951.163ENSACIG00000019772-9751.938Amphilophus_citrinellus
MGP_PahariEiJ_G0015911Smn19353.506ENSAOCG00000024444smn19455.019Amphiprion_ocellaris
MGP_PahariEiJ_G0015911Smn19353.875ENSAPEG00000016504smn19455.390Amphiprion_percula
MGP_PahariEiJ_G0015911Smn19055.133ENSATEG00000002182smn17954.580Anabas_testudineus
MGP_PahariEiJ_G0015911Smn18747.857ENSAPLG00000010912-9749.038Anas_platyrhynchos
MGP_PahariEiJ_G0015911Smn19953.061ENSACAG00000010017-9553.957Anolis_carolinensis
MGP_PahariEiJ_G0015911Smn19975.850ENSANAG00000032133-9975.850Aotus_nancymaae
MGP_PahariEiJ_G0015911Smn19052.632ENSACLG00000007308smn18853.232Astatotilapia_calliptera
MGP_PahariEiJ_G0015911Smn19350.186ENSAMXG00000013884smn19551.103Astyanax_mexicanus
MGP_PahariEiJ_G0015911Smn19777.500ENSBTAG00000005743SMN210076.125Bos_taurus
MGP_PahariEiJ_G0015911Smn19677.143ENSCJAG00000016290-9981.319Callithrix_jacchus
MGP_PahariEiJ_G0015911Smn110082.007ENSCAFG00000007812SMN10082.007Canis_familiaris
MGP_PahariEiJ_G0015911Smn19982.230ENSCAFG00020019229-9382.230Canis_lupus_dingo
MGP_PahariEiJ_G0015911Smn19778.014ENSCHIG00000015559-10076.094Capra_hircus
MGP_PahariEiJ_G0015911Smn19980.836ENSTSYG00000012058-9980.836Carlito_syrichta
MGP_PahariEiJ_G0015911Smn17664.159ENSCAPG00000011021-9666.972Cavia_aperea
MGP_PahariEiJ_G0015911Smn110074.744ENSCPOG00000036973-10074.744Cavia_porcellus
MGP_PahariEiJ_G0015911Smn19975.000ENSCPOG00000012328-9975.000Cavia_porcellus
MGP_PahariEiJ_G0015911Smn19678.417ENSCCAG00000018127-9976.632Cebus_capucinus
MGP_PahariEiJ_G0015911Smn19679.211ENSCATG00000037002-9981.319Cercocebus_atys
MGP_PahariEiJ_G0015911Smn110074.747ENSCLAG00000000284-10074.411Chinchilla_lanigera
MGP_PahariEiJ_G0015911Smn19680.714ENSCSAG00000015688-9978.840Chlorocebus_sabaeus
MGP_PahariEiJ_G0015911Smn18669.841ENSCHOG00000007346-10067.857Choloepus_hoffmanni
MGP_PahariEiJ_G0015911Smn19857.093ENSCPBG00000010968-9957.463Chrysemys_picta_bellii
MGP_PahariEiJ_G0015911Smn19573.214ENSCANG00000033324-9572.500Colobus_angolensis_palliatus
MGP_PahariEiJ_G0015911Smn19680.935ENSCANG00000038242-9982.418Colobus_angolensis_palliatus
MGP_PahariEiJ_G0015911Smn110092.683ENSCGRG00001017959-10091.289Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0015911Smn110071.678ENSCGRG00001016998-10066.783Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0015911Smn110092.683ENSCGRG00000007698Smn110091.289Cricetulus_griseus_crigri
MGP_PahariEiJ_G0015911Smn19352.313ENSCSEG00000015227smn19752.313Cynoglossus_semilaevis
MGP_PahariEiJ_G0015911Smn19253.137ENSCVAG00000007498smn19451.852Cyprinodon_variegatus
MGP_PahariEiJ_G0015911Smn19452.190ENSDARG00000018494smn19551.673Danio_rerio
MGP_PahariEiJ_G0015911Smn17365.238ENSDNOG00000045949-9065.238Dasypus_novemcinctus
MGP_PahariEiJ_G0015911Smn18774.468ENSDNOG00000007283-10076.763Dasypus_novemcinctus
MGP_PahariEiJ_G0015911Smn110073.288ENSDORG00000007082Smn19973.288Dipodomys_ordii
MGP_PahariEiJ_G0015911Smn17369.492ENSETEG00000001406-10066.505Echinops_telfairi
MGP_PahariEiJ_G0015911Smn19437.542ENSEBUG00000011902smn19436.201Eptatretus_burgeri
MGP_PahariEiJ_G0015911Smn19472.000ENSEASG00005018000-9670.909Equus_asinus_asinus
MGP_PahariEiJ_G0015911Smn110079.038ENSECAG00000015215-10078.007Equus_caballus
MGP_PahariEiJ_G0015911Smn18676.000ENSEEUG00000015777-10075.600Erinaceus_europaeus
MGP_PahariEiJ_G0015911Smn19254.152ENSELUG00000018067smn19452.652Esox_lucius
MGP_PahariEiJ_G0015911Smn110079.310ENSFCAG00000028292SMN10078.276Felis_catus
MGP_PahariEiJ_G0015911Smn19059.770ENSFALG00000012320-9159.231Ficedula_albicollis
MGP_PahariEiJ_G0015911Smn110074.411ENSFDAG00000017683-10074.074Fukomys_damarensis
MGP_PahariEiJ_G0015911Smn15655.233ENSFHEG00000018508smn19751.119Fundulus_heteroclitus
MGP_PahariEiJ_G0015911Smn19647.670ENSGMOG00000017279smn19644.043Gadus_morhua
MGP_PahariEiJ_G0015911Smn19358.889ENSGALG00000002430SMN9558.582Gallus_gallus
MGP_PahariEiJ_G0015911Smn19353.704ENSGAFG00000009501smn19453.704Gambusia_affinis
MGP_PahariEiJ_G0015911Smn19353.091ENSGACG00000010584smn19152.727Gasterosteus_aculeatus
MGP_PahariEiJ_G0015911Smn19858.131ENSGAGG00000011374-9958.131Gopherus_agassizii
MGP_PahariEiJ_G0015911Smn16377.901ENSGGOG00000026704-9975.943Gorilla_gorilla
MGP_PahariEiJ_G0015911Smn19468.864ENSGGOG00000003872-10070.290Gorilla_gorilla
MGP_PahariEiJ_G0015911Smn19247.719ENSHBUG00000013987smn19452.574Haplochromis_burtoni
MGP_PahariEiJ_G0015911Smn110073.288ENSHGLG00000001905-10072.945Heterocephalus_glaber_female
MGP_PahariEiJ_G0015911Smn19976.471ENSHGLG00000001018-9876.125Heterocephalus_glaber_female
MGP_PahariEiJ_G0015911Smn19976.471ENSHGLG00100011252-9876.125Heterocephalus_glaber_male
MGP_PahariEiJ_G0015911Smn19673.571ENSHGLG00100018676-10073.214Heterocephalus_glaber_male
MGP_PahariEiJ_G0015911Smn19050.000ENSHCOG00000017136smn18746.693Hippocampus_comes
MGP_PahariEiJ_G0015911Smn19251.301ENSIPUG00000012580smn18351.095Ictalurus_punctatus
MGP_PahariEiJ_G0015911Smn19183.588ENSSTOG00000012288-10082.182Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0015911Smn16763.158ENSJJAG00000014853-10062.667Jaculus_jaculus
MGP_PahariEiJ_G0015911Smn19352.574ENSKMAG00000007239smn19648.496Kryptolebias_marmoratus
MGP_PahariEiJ_G0015911Smn19354.945ENSLBEG00000022550smn19455.351Labrus_bergylta
MGP_PahariEiJ_G0015911Smn19335.252ENSLACG00000009808-5534.731Latimeria_chalumnae
MGP_PahariEiJ_G0015911Smn19252.364ENSLOCG00000011339smn19452.788Lepisosteus_oculatus
MGP_PahariEiJ_G0015911Smn110078.840ENSLAFG00000003425-9678.498Loxodonta_africana
MGP_PahariEiJ_G0015911Smn19674.552ENSMFAG00000008812-9972.945Macaca_fascicularis
MGP_PahariEiJ_G0015911Smn19681.429ENSMFAG00000031523SMN19982.418Macaca_fascicularis
MGP_PahariEiJ_G0015911Smn19673.835ENSMMUG00000030594-9972.260Macaca_mulatta
MGP_PahariEiJ_G0015911Smn19681.429ENSMMUG00000020214SMN19982.418Macaca_mulatta
MGP_PahariEiJ_G0015911Smn18661.702ENSMNEG00000036423-8664.253Macaca_nemestrina
MGP_PahariEiJ_G0015911Smn19681.071ENSMNEG00000035094-9982.418Macaca_nemestrina
MGP_PahariEiJ_G0015911Smn19580.935ENSMLEG00000041902-9983.333Mandrillus_leucophaeus
MGP_PahariEiJ_G0015911Smn19251.636ENSMAMG00000011034smn19448.175Mastacembelus_armatus
MGP_PahariEiJ_G0015911Smn19249.635ENSMZEG00005013634smn19452.518Maylandia_zebra
MGP_PahariEiJ_G0015911Smn18748.227ENSMGAG00000008889-9548.205Meleagris_gallopavo
MGP_PahariEiJ_G0015911Smn110091.638ENSMAUG00000010262Smn110090.244Mesocricetus_auratus
MGP_PahariEiJ_G0015911Smn17689.474ENSMICG00000034708-9984.091Microcebus_murinus
MGP_PahariEiJ_G0015911Smn110088.850ENSMOCG00000017833Smn110087.456Microtus_ochrogaster
MGP_PahariEiJ_G0015911Smn19244.643ENSMMOG00000005504smn19651.136Mola_mola
MGP_PahariEiJ_G0015911Smn110062.543ENSMODG00000001436-9962.543Monodelphis_domestica
MGP_PahariEiJ_G0015911Smn19252.878ENSMALG00000008025smn19453.333Monopterus_albus
MGP_PahariEiJ_G0015911Smn110094.444MGP_CAROLIEiJ_G0018836Smn110093.403Mus_caroli
MGP_PahariEiJ_G0015911Smn110095.139ENSMUSG00000021645Smn110093.403Mus_musculus
MGP_PahariEiJ_G0015911Smn110094.444MGP_SPRETEiJ_G0019718Smn110092.708Mus_spretus
MGP_PahariEiJ_G0015911Smn19582.545ENSMPUG00000014470-9882.545Mustela_putorius_furo
MGP_PahariEiJ_G0015911Smn19780.556ENSMLUG00000010603-9679.599Myotis_lucifugus
MGP_PahariEiJ_G0015911Smn110084.083ENSNGAG00000019833Smn110083.045Nannospalax_galili
MGP_PahariEiJ_G0015911Smn19250.558ENSNBRG00000023000smn19452.727Neolamprologus_brichardi
MGP_PahariEiJ_G0015911Smn19978.082ENSNLEG00000004454-9980.220Nomascus_leucogenys
MGP_PahariEiJ_G0015911Smn18157.143ENSMEUG00000011393-9958.407Notamacropus_eugenii
MGP_PahariEiJ_G0015911Smn18675.099ENSOPRG00000002015-10075.494Ochotona_princeps
MGP_PahariEiJ_G0015911Smn19576.364ENSODEG00000015976-9775.273Octodon_degus
MGP_PahariEiJ_G0015911Smn19350.000ENSONIG00000011799smn19549.821Oreochromis_niloticus
MGP_PahariEiJ_G0015911Smn19860.915ENSOANG00000001626-9862.324Ornithorhynchus_anatinus
MGP_PahariEiJ_G0015911Smn19973.379ENSOCUG00000026649-9976.109Oryctolagus_cuniculus
MGP_PahariEiJ_G0015911Smn19970.307ENSOCUG00000025183-9969.625Oryctolagus_cuniculus
MGP_PahariEiJ_G0015911Smn110077.931ENSOCUG00000017097-9977.931Oryctolagus_cuniculus
MGP_PahariEiJ_G0015911Smn19353.137ENSORLG00000010552smn19454.444Oryzias_latipes
MGP_PahariEiJ_G0015911Smn19352.256ENSORLG00020007936smn19451.685Oryzias_latipes_hni
MGP_PahariEiJ_G0015911Smn19353.333ENSORLG00015022425smn19455.019Oryzias_latipes_hsok
MGP_PahariEiJ_G0015911Smn19353.731ENSOMEG00000007824smn19455.185Oryzias_melastigma
MGP_PahariEiJ_G0015911Smn19170.370ENSOGAG00000031414-10068.166Otolemur_garnettii
MGP_PahariEiJ_G0015911Smn19576.364ENSOARG00000005425-10075.273Ovis_aries
MGP_PahariEiJ_G0015911Smn19679.928ENSPPAG00000036640-9980.220Pan_paniscus
MGP_PahariEiJ_G0015911Smn110079.655ENSPPRG00000005575-10078.621Panthera_pardus
MGP_PahariEiJ_G0015911Smn110079.381ENSPTIG00000007745-10078.351Panthera_tigris_altaica
MGP_PahariEiJ_G0015911Smn19679.078ENSPTRG00000016955-9980.220Pan_troglodytes
MGP_PahariEiJ_G0015911Smn19574.909ENSPANG00000000253-9873.958Papio_anubis
MGP_PahariEiJ_G0015911Smn19980.205ENSPANG00000013601-9982.418Papio_anubis
MGP_PahariEiJ_G0015911Smn19249.275ENSPKIG00000011096smn19451.515Paramormyrops_kingsleyae
MGP_PahariEiJ_G0015911Smn19354.610ENSPSIG00000014787-9053.025Pelodiscus_sinensis
MGP_PahariEiJ_G0015911Smn19345.035ENSPMGG00000012285smn19447.015Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0015911Smn19040.304ENSPMAG00000005004smn15643.787Petromyzon_marinus
MGP_PahariEiJ_G0015911Smn19863.860ENSPCIG00000025764-9963.860Phascolarctos_cinereus
MGP_PahariEiJ_G0015911Smn19354.444ENSPFOG00000007786smn19454.444Poecilia_formosa
MGP_PahariEiJ_G0015911Smn19354.815ENSPLAG00000012071smn19454.815Poecilia_latipinna
MGP_PahariEiJ_G0015911Smn19354.444ENSPMEG00000017085smn19454.444Poecilia_mexicana
MGP_PahariEiJ_G0015911Smn19355.311ENSPREG00000005824smn19454.815Poecilia_reticulata
MGP_PahariEiJ_G0015911Smn19278.277ENSPPYG00000015533-9777.528Pongo_abelii
MGP_PahariEiJ_G0015911Smn18652.823ENSPPYG00000019189-9953.226Pongo_abelii
MGP_PahariEiJ_G0015911Smn19276.667ENSPCAG00000004187-10076.667Procavia_capensis
MGP_PahariEiJ_G0015911Smn19061.887ENSPCOG00000022307-10063.462Propithecus_coquereli
MGP_PahariEiJ_G0015911Smn19782.796ENSPVAG00000005977-10081.507Pteropus_vampyrus
MGP_PahariEiJ_G0015911Smn19250.558ENSPNYG00000014148smn19452.727Pundamilia_nyererei
MGP_PahariEiJ_G0015911Smn19350.554ENSPNAG00000014007smn18350.730Pygocentrus_nattereri
MGP_PahariEiJ_G0015911Smn110092.361ENSRNOG00000018067Smn110090.972Rattus_norvegicus
MGP_PahariEiJ_G0015911Smn19680.714ENSRBIG00000037052-9982.418Rhinopithecus_bieti
MGP_PahariEiJ_G0015911Smn19566.547ENSRBIG00000036775-9566.187Rhinopithecus_bieti
MGP_PahariEiJ_G0015911Smn19965.979ENSRROG00000031088-9965.636Rhinopithecus_roxellana
MGP_PahariEiJ_G0015911Smn19680.714ENSRROG00000039399-9982.418Rhinopithecus_roxellana
MGP_PahariEiJ_G0015911Smn19677.978ENSSBOG00000011665-9980.220Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0015911Smn18471.600ENSSBOG00000020112-9368.284Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0015911Smn110063.230ENSSHAG00000001499-10061.818Sarcophilus_harrisii
MGP_PahariEiJ_G0015911Smn19353.114ENSSFOG00015015507smn19452.030Scleropages_formosus
MGP_PahariEiJ_G0015911Smn19351.119ENSSMAG00000007922smn19451.673Scophthalmus_maximus
MGP_PahariEiJ_G0015911Smn19350.923ENSSDUG00000018533smn19452.593Seriola_dumerili
MGP_PahariEiJ_G0015911Smn19351.292ENSSLDG00000021135smn19452.963Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0015911Smn19560.364ENSSPUG00000000373-9461.710Sphenodon_punctatus
MGP_PahariEiJ_G0015911Smn19353.676ENSSPAG00000004345smn19452.399Stegastes_partitus
MGP_PahariEiJ_G0015911Smn19778.929ENSSSCG00000016970-10078.498Sus_scrofa
MGP_PahariEiJ_G0015911Smn19759.712ENSSSCG00000029127-9760.839Sus_scrofa
MGP_PahariEiJ_G0015911Smn17852.800ENSSSCG00000033865-9553.521Sus_scrofa
MGP_PahariEiJ_G0015911Smn19457.554ENSTGUG00000001548-10056.294Taeniopygia_guttata
MGP_PahariEiJ_G0015911Smn15652.121ENSTRUG00000000736smn9647.212Takifugu_rubripes
MGP_PahariEiJ_G0015911Smn19349.643ENSTNIG00000009892smn19550.182Tetraodon_nigroviridis
MGP_PahariEiJ_G0015911Smn16678.646ENSTBEG00000002399-10079.710Tupaia_belangeri
MGP_PahariEiJ_G0015911Smn19778.495ENSTTRG00000005080-10077.891Tursiops_truncatus
MGP_PahariEiJ_G0015911Smn16381.868ENSUAMG00000024947-7681.643Ursus_americanus
MGP_PahariEiJ_G0015911Smn19782.437ENSUMAG00000007842-7481.661Ursus_maritimus
MGP_PahariEiJ_G0015911Smn19173.004ENSVPAG00000009887-10071.480Vicugna_pacos
MGP_PahariEiJ_G0015911Smn110082.007ENSVVUG00000006934-10082.007Vulpes_vulpes
MGP_PahariEiJ_G0015911Smn19136.559ENSXETG00000004912-7959.677Xenopus_tropicalis
MGP_PahariEiJ_G0015911Smn19553.214ENSXETG00000018189smn29650.877Xenopus_tropicalis
MGP_PahariEiJ_G0015911Smn19354.182ENSXMAG00000001521smn19552.574Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us