EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0015967 (Gene tree)
Gene ID: 110328776
Gene Symbol: Mtrex
Alias: 2610528A15Rik|Skiv2l2
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 58956 bases
Position: chr11:43118740-43177695
Accession: 110328776
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0027147	rRNA_proc-arch	PF13234.6	3.7e-86	1	1
MGP_PahariEiJ_P0027147	DEAD	PF00270.29	8.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0027147	-	3332	XM_021208218	MGP_PahariEiJ_P0027147	1040 (aa)	XP_021063877	UPI000A30E051

Gene Model

Click here to download MGP_PahariEiJ_G0015967's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0015967's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0015967	Mtrex	88	37.006	MGP_PahariEiJ_G0020472	Skiv2l	76	37.006

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0015967	Mtrex	100	97.409	ENSG00000039123	MTREX	100	97.409	Homo_sapiens
MGP_PahariEiJ_G0015967	Mtrex	100	82.887	ENSAPOG00000007814	mtrex	100	82.887	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0015967	Mtrex	100	97.028	ENSAMEG00000013856	MTREX	100	97.028	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0015967	Mtrex	92	87.565	ENSACIG00000015117	mtrex	96	87.565	Amphilophus_citrinellus
MGP_PahariEiJ_G0015967	Mtrex	100	82.999	ENSAOCG00000011884	mtrex	100	82.887	Amphiprion_ocellaris
MGP_PahariEiJ_G0015967	Mtrex	100	82.904	ENSAPEG00000019384	mtrex	100	82.792	Amphiprion_percula
MGP_PahariEiJ_G0015967	Mtrex	100	83.763	ENSATEG00000015117	mtrex	100	83.763	Anabas_testudineus
MGP_PahariEiJ_G0015967	Mtrex	95	92.246	ENSAPLG00000009694	MTREX	100	92.246	Anas_platyrhynchos
MGP_PahariEiJ_G0015967	Mtrex	100	90.709	ENSACAG00000015200	MTREX	96	90.865	Anolis_carolinensis
MGP_PahariEiJ_G0015967	Mtrex	100	97.313	ENSANAG00000023095	MTREX	100	97.313	Aotus_nancymaae
MGP_PahariEiJ_G0015967	Mtrex	100	82.330	ENSACLG00000001921	mtrex	100	82.218	Astatotilapia_calliptera
MGP_PahariEiJ_G0015967	Mtrex	97	81.201	ENSAMXG00000018751	mtrex	99	83.300	Astyanax_mexicanus
MGP_PahariEiJ_G0015967	Mtrex	100	97.212	ENSBTAG00000010518	MTREX	100	97.212	Bos_taurus
MGP_PahariEiJ_G0015967	Mtrex	91	53.417	WBGene00012342	mtr-4	94	52.990	Caenorhabditis_elegans
MGP_PahariEiJ_G0015967	Mtrex	100	96.183	ENSCJAG00000001773	MTREX	100	96.183	Callithrix_jacchus
MGP_PahariEiJ_G0015967	Mtrex	100	97.025	ENSCAFG00000006818	MTREX	100	97.025	Canis_familiaris
MGP_PahariEiJ_G0015967	Mtrex	100	97.025	ENSCAFG00020024352	MTREX	100	97.025	Canis_lupus_dingo
MGP_PahariEiJ_G0015967	Mtrex	100	97.025	ENSCHIG00000024413	MTREX	100	97.025	Capra_hircus
MGP_PahariEiJ_G0015967	Mtrex	93	96.948	ENSTSYG00000007389	MTREX	100	96.948	Carlito_syrichta
MGP_PahariEiJ_G0015967	Mtrex	96	72.645	ENSCAPG00000008696	MTREX	100	72.645	Cavia_aperea
MGP_PahariEiJ_G0015967	Mtrex	100	96.929	ENSCPOG00000009797	MTREX	100	96.929	Cavia_porcellus
MGP_PahariEiJ_G0015967	Mtrex	100	97.217	ENSCCAG00000014177	MTREX	100	97.217	Cebus_capucinus
MGP_PahariEiJ_G0015967	Mtrex	100	97.217	ENSCATG00000042153	MTREX	100	97.217	Cercocebus_atys
MGP_PahariEiJ_G0015967	Mtrex	100	96.641	ENSCLAG00000006622	MTREX	100	96.641	Chinchilla_lanigera
MGP_PahariEiJ_G0015967	Mtrex	100	92.536	ENSCSAG00000016445	MTREX	100	92.632	Chlorocebus_sabaeus
MGP_PahariEiJ_G0015967	Mtrex	70	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
MGP_PahariEiJ_G0015967	Mtrex	100	91.643	ENSCPBG00000026551	MTREX	94	92.123	Chrysemys_picta_bellii
MGP_PahariEiJ_G0015967	Mtrex	99	66.348	ENSCING00000003239	-	99	66.188	Ciona_intestinalis
MGP_PahariEiJ_G0015967	Mtrex	99	65.425	ENSCSAVG00000009304	-	100	69.892	Ciona_savignyi
MGP_PahariEiJ_G0015967	Mtrex	100	97.121	ENSCANG00000035770	MTREX	100	97.121	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0015967	Mtrex	100	98.175	ENSCGRG00001024680	Mtrex	100	98.175	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0015967	Mtrex	100	98.175	ENSCGRG00000000307	Mtrex	100	98.175	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0015967	Mtrex	100	81.757	ENSCSEG00000018621	mtrex	98	81.757	Cynoglossus_semilaevis
MGP_PahariEiJ_G0015967	Mtrex	100	83.636	ENSCVAG00000004556	mtrex	100	83.636	Cyprinodon_variegatus
MGP_PahariEiJ_G0015967	Mtrex	100	84.880	ENSDARG00000013457	mtrex	100	84.593	Danio_rerio
MGP_PahariEiJ_G0015967	Mtrex	100	95.507	ENSDNOG00000015375	MTREX	100	95.507	Dasypus_novemcinctus
MGP_PahariEiJ_G0015967	Mtrex	100	96.641	ENSDORG00000006782	Mtrex	100	96.641	Dipodomys_ordii
MGP_PahariEiJ_G0015967	Mtrex	99	62.571	FBgn0001986	Mtr4	92	65.886	Drosophila_melanogaster
MGP_PahariEiJ_G0015967	Mtrex	90	80.138	ENSETEG00000000727	MTREX	90	80.138	Echinops_telfairi
MGP_PahariEiJ_G0015967	Mtrex	99	74.060	ENSEBUG00000012869	mtrex	99	73.755	Eptatretus_burgeri
MGP_PahariEiJ_G0015967	Mtrex	100	96.545	ENSEASG00005013270	MTREX	100	96.545	Equus_asinus_asinus
MGP_PahariEiJ_G0015967	Mtrex	100	96.641	ENSECAG00000023723	MTREX	100	99.074	Equus_caballus
MGP_PahariEiJ_G0015967	Mtrex	98	87.707	ENSEEUG00000000527	MTREX	100	87.707	Erinaceus_europaeus
MGP_PahariEiJ_G0015967	Mtrex	98	84.205	ENSELUG00000004898	mtrex	100	89.286	Esox_lucius
MGP_PahariEiJ_G0015967	Mtrex	100	97.025	ENSFCAG00000010575	MTREX	100	97.025	Felis_catus
MGP_PahariEiJ_G0015967	Mtrex	100	90.000	ENSFALG00000010850	MTREX	100	90.000	Ficedula_albicollis
MGP_PahariEiJ_G0015967	Mtrex	100	96.538	ENSFDAG00000011199	MTREX	100	96.538	Fukomys_damarensis
MGP_PahariEiJ_G0015967	Mtrex	100	82.936	ENSFHEG00000023014	mtrex	100	82.000	Fundulus_heteroclitus
MGP_PahariEiJ_G0015967	Mtrex	100	79.063	ENSGMOG00000014702	mtrex	100	79.350	Gadus_morhua
MGP_PahariEiJ_G0015967	Mtrex	100	90.970	ENSGALG00000014709	MTREX	86	90.970	Gallus_gallus
MGP_PahariEiJ_G0015967	Mtrex	100	83.652	ENSGAFG00000012425	mtrex	100	83.652	Gambusia_affinis
MGP_PahariEiJ_G0015967	Mtrex	100	79.179	ENSGACG00000016260	mtrex	96	85.000	Gasterosteus_aculeatus
MGP_PahariEiJ_G0015967	Mtrex	100	91.739	ENSGAGG00000020036	MTREX	100	91.739	Gopherus_agassizii
MGP_PahariEiJ_G0015967	Mtrex	100	97.505	ENSGGOG00000001867	MTREX	100	97.505	Gorilla_gorilla
MGP_PahariEiJ_G0015967	Mtrex	100	82.330	ENSHBUG00000006229	mtrex	100	82.218	Haplochromis_burtoni
MGP_PahariEiJ_G0015967	Mtrex	100	96.731	ENSHGLG00000019445	SKIV2L2	100	96.731	Heterocephalus_glaber_female
MGP_PahariEiJ_G0015967	Mtrex	100	96.731	ENSHGLG00100011833	SKIV2L2	100	96.731	Heterocephalus_glaber_male
MGP_PahariEiJ_G0015967	Mtrex	91	84.521	ENSHCOG00000019995	mtrex	100	84.521	Hippocampus_comes
MGP_PahariEiJ_G0015967	Mtrex	100	84.674	ENSIPUG00000024348	skiv2l2	100	84.512	Ictalurus_punctatus
MGP_PahariEiJ_G0015967	Mtrex	100	97.121	ENSSTOG00000010802	MTREX	100	97.121	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0015967	Mtrex	100	90.865	ENSJJAG00000020975	Mtrex	100	90.865	Jaculus_jaculus
MGP_PahariEiJ_G0015967	Mtrex	100	82.775	ENSKMAG00000012642	mtrex	100	82.775	Kryptolebias_marmoratus
MGP_PahariEiJ_G0015967	Mtrex	100	83.078	ENSLBEG00000019367	mtrex	99	85.714	Labrus_bergylta
MGP_PahariEiJ_G0015967	Mtrex	100	88.088	ENSLACG00000009075	MTREX	100	87.656	Latimeria_chalumnae
MGP_PahariEiJ_G0015967	Mtrex	100	87.044	ENSLOCG00000010186	mtrex	100	86.852	Lepisosteus_oculatus
MGP_PahariEiJ_G0015967	Mtrex	99	94.338	ENSLAFG00000010497	MTREX	100	94.434	Loxodonta_africana
MGP_PahariEiJ_G0015967	Mtrex	100	97.217	ENSMFAG00000031610	MTREX	100	97.217	Macaca_fascicularis
MGP_PahariEiJ_G0015967	Mtrex	100	96.073	ENSMMUG00000010379	MTREX	100	96.073	Macaca_mulatta
MGP_PahariEiJ_G0015967	Mtrex	100	97.217	ENSMNEG00000032746	MTREX	100	97.217	Macaca_nemestrina
MGP_PahariEiJ_G0015967	Mtrex	100	97.217	ENSMLEG00000041051	MTREX	100	97.217	Mandrillus_leucophaeus
MGP_PahariEiJ_G0015967	Mtrex	95	86.203	ENSMAMG00000016753	mtrex	96	88.309	Mastacembelus_armatus
MGP_PahariEiJ_G0015967	Mtrex	100	82.330	ENSMZEG00005000414	mtrex	100	82.218	Maylandia_zebra
MGP_PahariEiJ_G0015967	Mtrex	95	67.510	ENSMGAG00000003980	MTREX	99	67.510	Meleagris_gallopavo
MGP_PahariEiJ_G0015967	Mtrex	100	98.079	ENSMAUG00000010727	Mtrex	100	98.079	Mesocricetus_auratus
MGP_PahariEiJ_G0015967	Mtrex	100	97.697	ENSMICG00000012779	MTREX	100	97.697	Microcebus_murinus
MGP_PahariEiJ_G0015967	Mtrex	100	98.177	ENSMOCG00000019886	Mtrex	100	98.177	Microtus_ochrogaster
MGP_PahariEiJ_G0015967	Mtrex	100	81.836	ENSMMOG00000002476	mtrex	100	81.836	Mola_mola
MGP_PahariEiJ_G0015967	Mtrex	100	92.981	ENSMODG00000019494	MTREX	100	93.269	Monodelphis_domestica
MGP_PahariEiJ_G0015967	Mtrex	92	82.088	ENSMALG00000002917	mtrex	99	82.088	Monopterus_albus
MGP_PahariEiJ_G0015967	Mtrex	100	98.846	MGP_CAROLIEiJ_G0018896	Mtrex	100	98.846	Mus_caroli
MGP_PahariEiJ_G0015967	Mtrex	100	99.038	ENSMUSG00000016018	Mtrex	100	99.038	Mus_musculus
MGP_PahariEiJ_G0015967	Mtrex	100	99.038	MGP_SPRETEiJ_G0019775	Mtrex	100	99.038	Mus_spretus
MGP_PahariEiJ_G0015967	Mtrex	100	97.217	ENSMPUG00000007619	MTREX	100	97.217	Mustela_putorius_furo
MGP_PahariEiJ_G0015967	Mtrex	100	95.877	ENSMLUG00000001152	MTREX	100	95.877	Myotis_lucifugus
MGP_PahariEiJ_G0015967	Mtrex	100	97.889	ENSNGAG00000011938	Mtrex	100	97.889	Nannospalax_galili
MGP_PahariEiJ_G0015967	Mtrex	100	82.426	ENSNBRG00000011293	mtrex	100	82.314	Neolamprologus_brichardi
MGP_PahariEiJ_G0015967	Mtrex	100	93.199	ENSNLEG00000001494	MTREX	100	93.295	Nomascus_leucogenys
MGP_PahariEiJ_G0015967	Mtrex	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
MGP_PahariEiJ_G0015967	Mtrex	100	82.212	ENSOPRG00000008009	MTREX	100	82.212	Ochotona_princeps
MGP_PahariEiJ_G0015967	Mtrex	100	96.353	ENSODEG00000017234	MTREX	100	96.353	Octodon_degus
MGP_PahariEiJ_G0015967	Mtrex	100	82.235	ENSONIG00000007587	mtrex	100	82.409	Oreochromis_niloticus
MGP_PahariEiJ_G0015967	Mtrex	100	97.596	ENSOCUG00000004463	MTREX	100	97.596	Oryctolagus_cuniculus
MGP_PahariEiJ_G0015967	Mtrex	100	82.364	ENSORLG00000005443	mtrex	100	82.235	Oryzias_latipes
MGP_PahariEiJ_G0015967	Mtrex	100	82.269	ENSORLG00020006329	mtrex	100	82.139	Oryzias_latipes_hni
MGP_PahariEiJ_G0015967	Mtrex	100	82.173	ENSORLG00015012924	mtrex	100	82.139	Oryzias_latipes_hsok
MGP_PahariEiJ_G0015967	Mtrex	100	81.506	ENSOMEG00000008825	mtrex	100	81.679	Oryzias_melastigma
MGP_PahariEiJ_G0015967	Mtrex	100	97.313	ENSOGAG00000002886	MTREX	100	97.313	Otolemur_garnettii
MGP_PahariEiJ_G0015967	Mtrex	100	96.746	ENSOARG00000007764	MTREX	100	96.746	Ovis_aries
MGP_PahariEiJ_G0015967	Mtrex	100	97.409	ENSPPAG00000039291	MTREX	100	97.409	Pan_paniscus
MGP_PahariEiJ_G0015967	Mtrex	100	97.025	ENSPPRG00000019701	MTREX	100	97.025	Panthera_pardus
MGP_PahariEiJ_G0015967	Mtrex	100	95.489	ENSPTIG00000009313	MTREX	100	95.489	Panthera_tigris_altaica
MGP_PahariEiJ_G0015967	Mtrex	100	97.409	ENSPTRG00000016878	MTREX	100	97.409	Pan_troglodytes
MGP_PahariEiJ_G0015967	Mtrex	100	97.121	ENSPANG00000009697	MTREX	100	97.121	Papio_anubis
MGP_PahariEiJ_G0015967	Mtrex	100	86.603	ENSPKIG00000020833	mtrex	100	86.603	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0015967	Mtrex	100	90.363	ENSPSIG00000012150	MTREX	100	92.027	Pelodiscus_sinensis
MGP_PahariEiJ_G0015967	Mtrex	100	81.184	ENSPMGG00000002582	mtrex	100	81.280	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0015967	Mtrex	95	65.628	ENSPMAG00000009668	mtrex	100	65.392	Petromyzon_marinus
MGP_PahariEiJ_G0015967	Mtrex	91	96.304	ENSPCIG00000024730	MTREX	100	96.304	Phascolarctos_cinereus
MGP_PahariEiJ_G0015967	Mtrex	75	86.946	ENSPFOG00000003141	mtrex	100	87.183	Poecilia_formosa
MGP_PahariEiJ_G0015967	Mtrex	100	83.270	ENSPLAG00000021311	mtrex	100	83.636	Poecilia_latipinna
MGP_PahariEiJ_G0015967	Mtrex	92	87.198	ENSPMEG00000010597	mtrex	99	87.513	Poecilia_mexicana
MGP_PahariEiJ_G0015967	Mtrex	100	83.078	ENSPREG00000003089	mtrex	100	83.445	Poecilia_reticulata
MGP_PahariEiJ_G0015967	Mtrex	98	97.463	ENSPPYG00000015469	MTREX	98	97.463	Pongo_abelii
MGP_PahariEiJ_G0015967	Mtrex	94	83.256	ENSPCAG00000013120	MTREX	94	83.256	Procavia_capensis
MGP_PahariEiJ_G0015967	Mtrex	99	91.886	ENSPCOG00000018092	MTREX	100	91.886	Propithecus_coquereli
MGP_PahariEiJ_G0015967	Mtrex	100	97.217	ENSPVAG00000002445	MTREX	100	97.217	Pteropus_vampyrus
MGP_PahariEiJ_G0015967	Mtrex	100	82.235	ENSPNYG00000006164	mtrex	100	82.122	Pundamilia_nyererei
MGP_PahariEiJ_G0015967	Mtrex	100	85.646	ENSPNAG00000008794	mtrex	100	85.646	Pygocentrus_nattereri
MGP_PahariEiJ_G0015967	Mtrex	99	98.348	ENSRNOG00000010125	Mtrex	97	98.348	Rattus_norvegicus
MGP_PahariEiJ_G0015967	Mtrex	100	95.489	ENSRBIG00000034930	MTREX	100	95.489	Rhinopithecus_bieti
MGP_PahariEiJ_G0015967	Mtrex	100	97.217	ENSRROG00000039895	MTREX	100	97.217	Rhinopithecus_roxellana
MGP_PahariEiJ_G0015967	Mtrex	90	55.870	YJL050W	MTR4	89	55.870	Saccharomyces_cerevisiae
MGP_PahariEiJ_G0015967	Mtrex	100	97.121	ENSSBOG00000026693	MTREX	100	97.121	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0015967	Mtrex	96	94.885	ENSSHAG00000004600	MTREX	100	94.885	Sarcophilus_harrisii
MGP_PahariEiJ_G0015967	Mtrex	100	87.452	ENSSFOG00015014355	skiv2l2	100	87.452	Scleropages_formosus
MGP_PahariEiJ_G0015967	Mtrex	100	82.729	ENSSMAG00000007572	mtrex	100	82.887	Scophthalmus_maximus
MGP_PahariEiJ_G0015967	Mtrex	100	83.397	ENSSDUG00000023789	mtrex	100	83.461	Seriola_dumerili
MGP_PahariEiJ_G0015967	Mtrex	100	83.174	ENSSLDG00000006301	mtrex	100	83.174	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0015967	Mtrex	100	93.762	ENSSARG00000008387	MTREX	100	93.762	Sorex_araneus
MGP_PahariEiJ_G0015967	Mtrex	100	79.347	ENSSPUG00000007071	MTREX	100	79.347	Sphenodon_punctatus
MGP_PahariEiJ_G0015967	Mtrex	100	81.584	ENSSPAG00000011319	mtrex	100	81.966	Stegastes_partitus
MGP_PahariEiJ_G0015967	Mtrex	100	97.025	ENSSSCG00000016911	MTREX	100	97.025	Sus_scrofa
MGP_PahariEiJ_G0015967	Mtrex	100	89.721	ENSTGUG00000002480	MTREX	100	89.519	Taeniopygia_guttata
MGP_PahariEiJ_G0015967	Mtrex	100	83.078	ENSTRUG00000014571	mtrex	100	83.078	Takifugu_rubripes
MGP_PahariEiJ_G0015967	Mtrex	100	81.478	ENSTBEG00000007769	MTREX	100	81.766	Tupaia_belangeri
MGP_PahariEiJ_G0015967	Mtrex	100	97.019	ENSTTRG00000008678	MTREX	100	97.019	Tursiops_truncatus
MGP_PahariEiJ_G0015967	Mtrex	100	96.929	ENSUAMG00000023061	MTREX	100	96.929	Ursus_americanus
MGP_PahariEiJ_G0015967	Mtrex	100	96.360	ENSUMAG00000009373	MTREX	99	98.966	Ursus_maritimus
MGP_PahariEiJ_G0015967	Mtrex	100	85.988	ENSVPAG00000011174	MTREX	100	85.893	Vicugna_pacos
MGP_PahariEiJ_G0015967	Mtrex	100	97.217	ENSVVUG00000021337	MTREX	100	97.217	Vulpes_vulpes
MGP_PahariEiJ_G0015967	Mtrex	100	88.314	ENSXETG00000032798	MTREX	100	88.314	Xenopus_tropicalis
MGP_PahariEiJ_G0015967	Mtrex	100	83.349	ENSXMAG00000004799	mtrex	100	83.349	Xiphophorus_maculatus