EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0016057 (Gene tree)
Gene ID: 110329176
Gene Symbol: Zfr
Alias: C920030H05Rik
Full Name: zinc finger RNA binding protein
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 65189 bases
Position: chr11:58579947-58645135
Accession: 110329176
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0027395	DZF	PF07528.14	1.7e-69	1	1
MGP_PahariEiJ_P0027400	DZF	PF07528.14	9.2e-66	1	1
MGP_PahariEiJ_P0027395	zf-met	PF12874.7	3.4e-21	1	3
MGP_PahariEiJ_P0027395	zf-met	PF12874.7	3.4e-21	2	3
MGP_PahariEiJ_P0027395	zf-met	PF12874.7	3.4e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0027402	-	664	-	-	- (aa)	-	-
MGP_PahariEiJ_T0027403	-	857	-	-	- (aa)	-	-
MGP_PahariEiJ_T0027400	-	897	-	MGP_PahariEiJ_P0027400	298 (aa)	-	-
MGP_PahariEiJ_T0027401	-	932	-	MGP_PahariEiJ_P0027401	43 (aa)	-	-
MGP_PahariEiJ_T0027398	-	517	-	-	- (aa)	-	-
MGP_PahariEiJ_T0027399	-	565	-	MGP_PahariEiJ_P0027399	114 (aa)	-	-
MGP_PahariEiJ_T0027396	-	812	-	MGP_PahariEiJ_P0027396	247 (aa)	-	-
MGP_PahariEiJ_T0027397	-	633	-	MGP_PahariEiJ_P0027397	193 (aa)	-	-
MGP_PahariEiJ_T0027395	-	4839	XM_021208777	MGP_PahariEiJ_P0027395	1074 (aa)	XP_021064436	UPI000A30C94D

Gene Model

Click here to download MGP_PahariEiJ_G0016057's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0016057's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0016057	Zfr	100	56.522	MGP_PahariEiJ_G0031040	Zfr2	91	51.534
MGP_PahariEiJ_G0016057	Zfr	100	53.443	MGP_PahariEiJ_G0024973	Strbp	97	46.825

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0016057	Zfr	100	98.045	ENSG00000056097	ZFR	100	98.045	Homo_sapiens
MGP_PahariEiJ_G0016057	Zfr	100	78.188	ENSAPOG00000009740	zfr	100	72.551	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0016057	Zfr	100	98.324	ENSAMEG00000006184	ZFR	100	98.324	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0016057	Zfr	100	79.195	ENSACIG00000015926	zfr	100	74.738	Amphilophus_citrinellus
MGP_PahariEiJ_G0016057	Zfr	100	73.564	ENSAOCG00000013876	zfr	100	74.771	Amphiprion_ocellaris
MGP_PahariEiJ_G0016057	Zfr	100	79.195	ENSAPEG00000024383	zfr	100	77.422	Amphiprion_percula
MGP_PahariEiJ_G0016057	Zfr	100	79.195	ENSATEG00000010271	zfr	100	77.339	Anabas_testudineus
MGP_PahariEiJ_G0016057	Zfr	78	84.790	ENSAPLG00000015627	-	100	85.030	Anas_platyrhynchos
MGP_PahariEiJ_G0016057	Zfr	100	91.275	ENSACAG00000007880	ZFR	100	87.848	Anolis_carolinensis
MGP_PahariEiJ_G0016057	Zfr	100	98.324	ENSANAG00000023333	ZFR	100	98.324	Aotus_nancymaae
MGP_PahariEiJ_G0016057	Zfr	100	78.859	ENSACLG00000016832	zfr	100	74.709	Astatotilapia_calliptera
MGP_PahariEiJ_G0016057	Zfr	100	78.523	ENSAMXG00000019511	zfr	100	79.384	Astyanax_mexicanus
MGP_PahariEiJ_G0016057	Zfr	100	98.324	ENSBTAG00000008414	ZFR	100	98.324	Bos_taurus
MGP_PahariEiJ_G0016057	Zfr	100	98.417	ENSCJAG00000018740	ZFR	100	98.417	Callithrix_jacchus
MGP_PahariEiJ_G0016057	Zfr	100	95.822	ENSCAFG00000018886	ZFR	100	98.269	Canis_familiaris
MGP_PahariEiJ_G0016057	Zfr	100	98.324	ENSCAFG00020016859	-	100	98.324	Canis_lupus_dingo
MGP_PahariEiJ_G0016057	Zfr	100	98.138	ENSCHIG00000007710	ZFR	100	98.138	Capra_hircus
MGP_PahariEiJ_G0016057	Zfr	100	97.315	ENSTSYG00000010670	ZFR	99	97.222	Carlito_syrichta
MGP_PahariEiJ_G0016057	Zfr	100	85.570	ENSCAPG00000015655	ZFR	100	74.854	Cavia_aperea
MGP_PahariEiJ_G0016057	Zfr	100	96.980	ENSCPOG00000000862	ZFR	100	92.315	Cavia_porcellus
MGP_PahariEiJ_G0016057	Zfr	100	98.231	ENSCCAG00000024473	ZFR	100	98.231	Cebus_capucinus
MGP_PahariEiJ_G0016057	Zfr	100	98.231	ENSCATG00000038311	ZFR	100	98.231	Cercocebus_atys
MGP_PahariEiJ_G0016057	Zfr	100	96.980	ENSCLAG00000007408	ZFR	100	97.665	Chinchilla_lanigera
MGP_PahariEiJ_G0016057	Zfr	100	98.045	ENSCSAG00000017180	ZFR	100	98.045	Chlorocebus_sabaeus
MGP_PahariEiJ_G0016057	Zfr	100	77.852	ENSCHOG00000003848	ZFR	100	78.021	Choloepus_hoffmanni
MGP_PahariEiJ_G0016057	Zfr	100	91.611	ENSCPBG00000024211	ZFR	100	91.466	Chrysemys_picta_bellii
MGP_PahariEiJ_G0016057	Zfr	100	98.045	ENSCANG00000017807	ZFR	100	98.045	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0016057	Zfr	100	98.976	ENSCGRG00001016009	Zfr	100	98.976	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0016057	Zfr	100	97.315	ENSCGRG00000001228	Zfr	99	96.872	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0016057	Zfr	100	77.517	ENSCSEG00000011169	ZFR	99	75.207	Cynoglossus_semilaevis
MGP_PahariEiJ_G0016057	Zfr	100	79.195	ENSCSEG00000009224	zfr	100	74.590	Cynoglossus_semilaevis
MGP_PahariEiJ_G0016057	Zfr	100	77.852	ENSCVAG00000016494	zfr	100	73.565	Cyprinodon_variegatus
MGP_PahariEiJ_G0016057	Zfr	100	77.901	ENSDARG00000027109	zfr	100	78.851	Danio_rerio
MGP_PahariEiJ_G0016057	Zfr	100	97.305	ENSDNOG00000008852	ZFR	100	97.305	Dasypus_novemcinctus
MGP_PahariEiJ_G0016057	Zfr	100	98.045	ENSDORG00000016643	Zfr	100	98.045	Dipodomys_ordii
MGP_PahariEiJ_G0016057	Zfr	100	96.309	ENSETEG00000008937	ZFR	100	92.086	Echinops_telfairi
MGP_PahariEiJ_G0016057	Zfr	100	61.745	ENSEBUG00000012503	-	90	60.624	Eptatretus_burgeri
MGP_PahariEiJ_G0016057	Zfr	100	98.045	ENSEASG00005007104	ZFR	100	98.045	Equus_asinus_asinus
MGP_PahariEiJ_G0016057	Zfr	82	97.955	ENSECAG00000012851	ZFR	99	97.955	Equus_caballus
MGP_PahariEiJ_G0016057	Zfr	95	84.631	ENSEEUG00000014206	ZFR	94	84.631	Erinaceus_europaeus
MGP_PahariEiJ_G0016057	Zfr	100	73.026	ENSELUG00000022743	zfr	99	68.556	Esox_lucius
MGP_PahariEiJ_G0016057	Zfr	100	98.417	ENSFCAG00000000354	ZFR	100	98.417	Felis_catus
MGP_PahariEiJ_G0016057	Zfr	100	92.953	ENSFALG00000002149	ZFR	100	89.944	Ficedula_albicollis
MGP_PahariEiJ_G0016057	Zfr	100	97.315	ENSFDAG00000012993	ZFR	100	97.172	Fukomys_damarensis
MGP_PahariEiJ_G0016057	Zfr	100	75.839	ENSFHEG00000012064	zfr	100	68.913	Fundulus_heteroclitus
MGP_PahariEiJ_G0016057	Zfr	94	83.750	ENSGMOG00000003967	zfr	94	82.432	Gadus_morhua
MGP_PahariEiJ_G0016057	Zfr	100	91.611	ENSGALG00000003235	-	100	91.713	Gallus_gallus
MGP_PahariEiJ_G0016057	Zfr	100	90.268	ENSGALG00000034488	-	100	89.665	Gallus_gallus
MGP_PahariEiJ_G0016057	Zfr	99	62.139	ENSGAFG00000016229	zfr	100	68.880	Gambusia_affinis
MGP_PahariEiJ_G0016057	Zfr	100	77.517	ENSGACG00000005045	zfr	100	73.129	Gasterosteus_aculeatus
MGP_PahariEiJ_G0016057	Zfr	96	91.638	ENSGAGG00000013544	ZFR	99	90.784	Gopherus_agassizii
MGP_PahariEiJ_G0016057	Zfr	100	98.045	ENSGGOG00000016302	ZFR	100	98.045	Gorilla_gorilla
MGP_PahariEiJ_G0016057	Zfr	100	97.672	ENSHGLG00000008088	ZFR	100	97.672	Heterocephalus_glaber_female
MGP_PahariEiJ_G0016057	Zfr	100	96.980	ENSHGLG00100016776	ZFR	99	97.568	Heterocephalus_glaber_male
MGP_PahariEiJ_G0016057	Zfr	100	76.254	ENSHCOG00000001548	zfr	100	75.480	Hippocampus_comes
MGP_PahariEiJ_G0016057	Zfr	100	79.530	ENSIPUG00000008192	zfr	100	79.072	Ictalurus_punctatus
MGP_PahariEiJ_G0016057	Zfr	100	97.300	ENSSTOG00000008742	ZFR	100	97.300	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0016057	Zfr	100	97.315	ENSJJAG00000023064	Zfr	98	92.439	Jaculus_jaculus
MGP_PahariEiJ_G0016057	Zfr	92	75.225	ENSKMAG00000009468	zfr	99	76.214	Kryptolebias_marmoratus
MGP_PahariEiJ_G0016057	Zfr	100	77.303	ENSLBEG00000010783	zfr	100	76.287	Labrus_bergylta
MGP_PahariEiJ_G0016057	Zfr	100	77.613	ENSLACG00000000831	ZFR	100	79.278	Latimeria_chalumnae
MGP_PahariEiJ_G0016057	Zfr	100	81.208	ENSLOCG00000006727	zfr	100	79.892	Lepisosteus_oculatus
MGP_PahariEiJ_G0016057	Zfr	100	97.315	ENSLAFG00000002308	ZFR	100	97.433	Loxodonta_africana
MGP_PahariEiJ_G0016057	Zfr	100	97.315	ENSMFAG00000042691	ZFR	100	97.300	Macaca_fascicularis
MGP_PahariEiJ_G0016057	Zfr	100	98.231	ENSMMUG00000001317	ZFR	100	98.231	Macaca_mulatta
MGP_PahariEiJ_G0016057	Zfr	100	98.231	ENSMNEG00000029441	ZFR	100	98.231	Macaca_nemestrina
MGP_PahariEiJ_G0016057	Zfr	100	97.315	ENSMLEG00000028503	ZFR	100	98.060	Mandrillus_leucophaeus
MGP_PahariEiJ_G0016057	Zfr	100	77.181	ENSMAMG00000017351	zfr	100	76.379	Mastacembelus_armatus
MGP_PahariEiJ_G0016057	Zfr	100	78.859	ENSMZEG00005021243	zfr	100	74.709	Maylandia_zebra
MGP_PahariEiJ_G0016057	Zfr	100	74.000	ENSMGAG00000002841	ZFR	99	77.444	Meleagris_gallopavo
MGP_PahariEiJ_G0016057	Zfr	100	98.231	ENSMAUG00000000976	Zfr	100	98.231	Mesocricetus_auratus
MGP_PahariEiJ_G0016057	Zfr	100	98.045	ENSMICG00000001244	ZFR	100	98.045	Microcebus_murinus
MGP_PahariEiJ_G0016057	Zfr	100	98.790	ENSMOCG00000018630	Zfr	100	98.790	Microtus_ochrogaster
MGP_PahariEiJ_G0016057	Zfr	100	80.201	ENSMMOG00000012585	zfr	90	76.085	Mola_mola
MGP_PahariEiJ_G0016057	Zfr	100	94.631	ENSMODG00000020412	ZFR	100	94.320	Monodelphis_domestica
MGP_PahariEiJ_G0016057	Zfr	100	78.523	ENSMALG00000007123	zfr	94	84.932	Monopterus_albus
MGP_PahariEiJ_G0016057	Zfr	100	99.721	MGP_CAROLIEiJ_G0019681	Zfr	100	99.721	Mus_caroli
MGP_PahariEiJ_G0016057	Zfr	100	99.664	ENSMUSG00000022201	Zfr	100	100.000	Mus_musculus
MGP_PahariEiJ_G0016057	Zfr	100	99.348	MGP_SPRETEiJ_G0020574	Zfr	100	99.348	Mus_spretus
MGP_PahariEiJ_G0016057	Zfr	73	97.840	ENSMPUG00000015193	-	99	97.840	Mustela_putorius_furo
MGP_PahariEiJ_G0016057	Zfr	52	100.000	ENSMPUG00000015194	-	84	100.000	Mustela_putorius_furo
MGP_PahariEiJ_G0016057	Zfr	100	97.315	ENSMLUG00000011797	ZFR	100	97.295	Myotis_lucifugus
MGP_PahariEiJ_G0016057	Zfr	100	98.231	ENSNGAG00000018328	Zfr	100	98.231	Nannospalax_galili
MGP_PahariEiJ_G0016057	Zfr	94	84.656	ENSNBRG00000008378	zfr	100	73.617	Neolamprologus_brichardi
MGP_PahariEiJ_G0016057	Zfr	100	97.315	ENSNLEG00000014098	ZFR	100	97.963	Nomascus_leucogenys
MGP_PahariEiJ_G0016057	Zfr	96	87.646	ENSMEUG00000010225	ZFR	100	87.646	Notamacropus_eugenii
MGP_PahariEiJ_G0016057	Zfr	83	98.800	ENSOPRG00000016756	ZFR	84	98.800	Ochotona_princeps
MGP_PahariEiJ_G0016057	Zfr	100	96.980	ENSODEG00000001990	ZFR	100	97.471	Octodon_degus
MGP_PahariEiJ_G0016057	Zfr	100	69.868	ENSONIG00000013960	zfr	100	60.294	Oreochromis_niloticus
MGP_PahariEiJ_G0016057	Zfr	100	94.631	ENSOANG00000014434	ZFR	99	93.495	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0016057	Zfr	100	97.858	ENSOCUG00000016737	ZFR	100	97.858	Oryctolagus_cuniculus
MGP_PahariEiJ_G0016057	Zfr	100	77.517	ENSORLG00000017243	zfr	99	75.486	Oryzias_latipes
MGP_PahariEiJ_G0016057	Zfr	100	77.517	ENSORLG00020014823	zfr	99	75.414	Oryzias_latipes_hni
MGP_PahariEiJ_G0016057	Zfr	100	77.517	ENSORLG00015005801	zfr	99	75.414	Oryzias_latipes_hsok
MGP_PahariEiJ_G0016057	Zfr	100	77.852	ENSOMEG00000003336	zfr	99	76.147	Oryzias_melastigma
MGP_PahariEiJ_G0016057	Zfr	100	95.628	ENSOGAG00000015117	ZFR	100	95.628	Otolemur_garnettii
MGP_PahariEiJ_G0016057	Zfr	100	97.315	ENSOARG00000012233	ZFR	100	97.187	Ovis_aries
MGP_PahariEiJ_G0016057	Zfr	100	96.980	ENSPPAG00000027447	ZFR	99	97.767	Pan_paniscus
MGP_PahariEiJ_G0016057	Zfr	100	98.510	ENSPPRG00000008253	ZFR	100	98.510	Panthera_pardus
MGP_PahariEiJ_G0016057	Zfr	100	97.315	ENSPTIG00000010038	ZFR	99	95.518	Panthera_tigris_altaica
MGP_PahariEiJ_G0016057	Zfr	100	98.138	ENSPTRG00000016771	ZFR	100	98.138	Pan_troglodytes
MGP_PahariEiJ_G0016057	Zfr	100	97.315	ENSPANG00000003729	ZFR	100	96.089	Papio_anubis
MGP_PahariEiJ_G0016057	Zfr	100	80.201	ENSPKIG00000016781	ZFR	100	78.841	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0016057	Zfr	100	75.168	ENSPKIG00000007596	ZFR	100	69.362	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0016057	Zfr	100	91.946	ENSPSIG00000005779	ZFR	100	93.153	Pelodiscus_sinensis
MGP_PahariEiJ_G0016057	Zfr	100	74.161	ENSPMGG00000015984	zfr	100	70.833	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0016057	Zfr	96	97.488	ENSPEMG00000014573	Zfr	98	97.488	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0016057	Zfr	100	94.295	ENSPCIG00000020906	ZFR	100	94.134	Phascolarctos_cinereus
MGP_PahariEiJ_G0016057	Zfr	100	77.852	ENSPFOG00000005931	zfr	100	75.755	Poecilia_formosa
MGP_PahariEiJ_G0016057	Zfr	100	77.517	ENSPREG00000011947	zfr	100	76.243	Poecilia_reticulata
MGP_PahariEiJ_G0016057	Zfr	100	96.644	ENSPPYG00000015378	ZFR	99	97.672	Pongo_abelii
MGP_PahariEiJ_G0016057	Zfr	100	89.385	ENSPCAG00000007277	ZFR	100	89.385	Procavia_capensis
MGP_PahariEiJ_G0016057	Zfr	96	96.864	ENSPCOG00000000045	ZFR	99	97.843	Propithecus_coquereli
MGP_PahariEiJ_G0016057	Zfr	94	97.576	ENSPVAG00000004780	ZFR	94	97.576	Pteropus_vampyrus
MGP_PahariEiJ_G0016057	Zfr	100	78.859	ENSPNYG00000006239	zfr	100	74.709	Pundamilia_nyererei
MGP_PahariEiJ_G0016057	Zfr	100	79.866	ENSPNAG00000025151	zfr	100	80.952	Pygocentrus_nattereri
MGP_PahariEiJ_G0016057	Zfr	100	99.348	ENSRNOG00000011627	Zfr	100	100.000	Rattus_norvegicus
MGP_PahariEiJ_G0016057	Zfr	100	98.138	ENSRBIG00000041561	ZFR	100	98.138	Rhinopithecus_bieti
MGP_PahariEiJ_G0016057	Zfr	100	98.138	ENSRROG00000044008	ZFR	100	98.138	Rhinopithecus_roxellana
MGP_PahariEiJ_G0016057	Zfr	100	96.980	ENSSBOG00000024150	ZFR	99	97.860	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0016057	Zfr	100	94.631	ENSSHAG00000015478	ZFR	100	93.883	Sarcophilus_harrisii
MGP_PahariEiJ_G0016057	Zfr	100	78.188	ENSSFOG00015017300	ZFR	100	73.535	Scleropages_formosus
MGP_PahariEiJ_G0016057	Zfr	100	77.076	ENSSMAG00000000320	zfr	100	76.203	Scophthalmus_maximus
MGP_PahariEiJ_G0016057	Zfr	100	79.195	ENSSDUG00000013882	zfr	100	77.319	Seriola_dumerili
MGP_PahariEiJ_G0016057	Zfr	100	79.530	ENSSLDG00000000762	zfr	100	70.432	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0016057	Zfr	89	99.099	ENSSARG00000006571	ZFR	93	99.099	Sorex_araneus
MGP_PahariEiJ_G0016057	Zfr	100	89.933	ENSSPUG00000016786	ZFR	100	90.185	Sphenodon_punctatus
MGP_PahariEiJ_G0016057	Zfr	100	78.859	ENSSPAG00000019293	zfr	100	77.135	Stegastes_partitus
MGP_PahariEiJ_G0016057	Zfr	100	98.138	ENSSSCG00000027681	ZFR	100	98.138	Sus_scrofa
MGP_PahariEiJ_G0016057	Zfr	100	92.333	ENSTGUG00000001909	ZFR	100	91.174	Taeniopygia_guttata
MGP_PahariEiJ_G0016057	Zfr	100	79.195	ENSTRUG00000016620	zfr	100	77.156	Takifugu_rubripes
MGP_PahariEiJ_G0016057	Zfr	100	76.510	ENSTNIG00000018856	zfr	98	72.559	Tetraodon_nigroviridis
MGP_PahariEiJ_G0016057	Zfr	100	77.654	ENSTBEG00000017687	ZFR	100	77.467	Tupaia_belangeri
MGP_PahariEiJ_G0016057	Zfr	100	97.315	ENSTTRG00000017321	ZFR	100	93.017	Tursiops_truncatus
MGP_PahariEiJ_G0016057	Zfr	78	97.969	ENSUAMG00000000172	-	99	97.969	Ursus_americanus
MGP_PahariEiJ_G0016057	Zfr	78	97.969	ENSUMAG00000013805	-	99	97.969	Ursus_maritimus
MGP_PahariEiJ_G0016057	Zfr	100	97.651	ENSVPAG00000011011	ZFR	100	94.972	Vicugna_pacos
MGP_PahariEiJ_G0016057	Zfr	100	98.417	ENSVVUG00000022171	-	100	98.417	Vulpes_vulpes
MGP_PahariEiJ_G0016057	Zfr	100	86.577	ENSXETG00000015598	zfr	100	79.740	Xenopus_tropicalis
MGP_PahariEiJ_G0016057	Zfr	100	77.852	ENSXCOG00000009361	zfr	100	74.291	Xiphophorus_couchianus
MGP_PahariEiJ_G0016057	Zfr	100	77.517	ENSXMAG00000013356	zfr	100	74.197	Xiphophorus_maculatus