EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0016108 (Gene tree)
Gene ID: -
Gene Symbol: Srl
Alias: 9830004M20Rik|sar|sarcalumenin
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 72626 bases
Position: chr12:755075-827700
Accession: 2146620
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0027574	MMR_HSR1	PF01926.23	5.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0027576	-	350	-	-	- (aa)	-	-
MGP_PahariEiJ_T0027574	-	5021	-	MGP_PahariEiJ_P0027574	922 (aa)	-	-
MGP_PahariEiJ_T0027575	-	367	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0016108's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0016108's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0016108	Srl	50	46.400	ENSG00000185739	SRL	100	96.984	Homo_sapiens
MGP_PahariEiJ_G0016108	Srl	98	66.523	ENSAMEG00000010862	SRL	100	66.523	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0016108	Srl	57	66.111	ENSACLG00000024674	SRL	65	65.926	Astatotilapia_calliptera
MGP_PahariEiJ_G0016108	Srl	66	96.460	ENSBTAG00000001078	SRL	98	64.466	Bos_taurus
MGP_PahariEiJ_G0016108	Srl	52	92.917	ENSCAFG00000019233	SRL	82	97.291	Canis_familiaris
MGP_PahariEiJ_G0016108	Srl	69	81.377	ENSCAFG00020025024	SRL	98	69.374	Canis_lupus_dingo
MGP_PahariEiJ_G0016108	Srl	78	94.255	ENSCHIG00000017927	SRL	98	64.829	Capra_hircus
MGP_PahariEiJ_G0016108	Srl	100	67.101	ENSCATG00000032227	-	96	96.264	Cercocebus_atys
MGP_PahariEiJ_G0016108	Srl	100	68.618	ENSCSAG00000009635	-	98	68.308	Chlorocebus_sabaeus
MGP_PahariEiJ_G0016108	Srl	70	96.364	ENSCHOG00000001618	SRL	85	96.364	Choloepus_hoffmanni
MGP_PahariEiJ_G0016108	Srl	58	92.784	ENSCPBG00000026371	SRL	93	89.823	Chrysemys_picta_bellii
MGP_PahariEiJ_G0016108	Srl	98	80.480	ENSCGRG00001016630	Srl	96	97.566	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0016108	Srl	98	80.480	ENSCGRG00000005458	Srl	96	97.566	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0016108	Srl	50	82.495	ENSCSEG00000016151	srl	94	84.389	Cynoglossus_semilaevis
MGP_PahariEiJ_G0016108	Srl	50	72.651	ENSCVAG00000022465	SRL	60	75.442	Cyprinodon_variegatus
MGP_PahariEiJ_G0016108	Srl	50	82.789	ENSDARG00000104587	srl	94	85.520	Danio_rerio
MGP_PahariEiJ_G0016108	Srl	100	69.762	ENSDNOG00000011643	SRL	98	67.952	Dasypus_novemcinctus
MGP_PahariEiJ_G0016108	Srl	99	67.603	ENSEASG00005000942	SRL	98	68.977	Equus_asinus_asinus
MGP_PahariEiJ_G0016108	Srl	99	65.049	ENSECAG00000024219	SRL	93	96.154	Equus_caballus
MGP_PahariEiJ_G0016108	Srl	50	79.281	ENSELUG00000015616	srl	94	81.140	Esox_lucius
MGP_PahariEiJ_G0016108	Srl	100	66.879	ENSFCAG00000022075	SRL	94	97.065	Felis_catus
MGP_PahariEiJ_G0016108	Srl	50	88.387	ENSFALG00000004328	SRL	65	87.879	Ficedula_albicollis
MGP_PahariEiJ_G0016108	Srl	56	64.298	ENSFHEG00000011854	SRL	98	76.417	Fundulus_heteroclitus
MGP_PahariEiJ_G0016108	Srl	69	69.367	ENSGALG00000038884	SRL	93	91.818	Gallus_gallus
MGP_PahariEiJ_G0016108	Srl	99	68.673	ENSGGOG00000011312	-	96	96.264	Gorilla_gorilla
MGP_PahariEiJ_G0016108	Srl	98	77.381	ENSSTOG00000021151	-	96	97.345	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0016108	Srl	52	69.960	ENSKMAG00000019537	SRL	99	75.909	Kryptolebias_marmoratus
MGP_PahariEiJ_G0016108	Srl	50	73.638	ENSLBEG00000013811	SRL	95	75.566	Labrus_bergylta
MGP_PahariEiJ_G0016108	Srl	50	83.404	ENSLACG00000002825	SRL	98	87.133	Latimeria_chalumnae
MGP_PahariEiJ_G0016108	Srl	98	70.479	ENSLAFG00000006329	SRL	98	70.646	Loxodonta_africana
MGP_PahariEiJ_G0016108	Srl	100	65.370	ENSMNEG00000019236	-	96	96.247	Macaca_nemestrina
MGP_PahariEiJ_G0016108	Srl	57	66.111	ENSMZEG00005004010	SRL	65	65.926	Maylandia_zebra
MGP_PahariEiJ_G0016108	Srl	66	72.669	ENSMGAG00000009342	SRL	92	93.425	Meleagris_gallopavo
MGP_PahariEiJ_G0016108	Srl	71	78.560	ENSMICG00000032307	SRL	93	96.606	Microcebus_murinus
MGP_PahariEiJ_G0016108	Srl	69	77.760	ENSMODG00000016380	-	98	64.440	Monodelphis_domestica
MGP_PahariEiJ_G0016108	Srl	98	94.702	MGP_CAROLIEiJ_G0020400	Srl	96	99.558	Mus_caroli
MGP_PahariEiJ_G0016108	Srl	100	95.445	ENSMUSG00000022519	Srl	96	99.558	Mus_musculus
MGP_PahariEiJ_G0016108	Srl	100	95.011	MGP_SPRETEiJ_G0021294	Srl	96	99.558	Mus_spretus
MGP_PahariEiJ_G0016108	Srl	100	69.297	ENSMPUG00000015025	SRL	97	68.867	Mustela_putorius_furo
MGP_PahariEiJ_G0016108	Srl	98	79.877	ENSMLUG00000030733	SRL	100	79.877	Myotis_lucifugus
MGP_PahariEiJ_G0016108	Srl	57	65.926	ENSNBRG00000002422	SRL	56	74.419	Neolamprologus_brichardi
MGP_PahariEiJ_G0016108	Srl	100	67.459	ENSOPRG00000000477	-	98	69.011	Ochotona_princeps
MGP_PahariEiJ_G0016108	Srl	50	82.096	ENSONIG00000005192	srl	94	84.389	Oreochromis_niloticus
MGP_PahariEiJ_G0016108	Srl	100	73.065	ENSOCUG00000025140	SRL	98	73.319	Oryctolagus_cuniculus
MGP_PahariEiJ_G0016108	Srl	98	68.290	ENSOGAG00000029266	SRL	100	68.306	Otolemur_garnettii
MGP_PahariEiJ_G0016108	Srl	62	96.460	ENSOARG00000003074	SRL	80	96.460	Ovis_aries
MGP_PahariEiJ_G0016108	Srl	98	67.692	ENSPPAG00000024919	-	100	96.984	Pan_paniscus
MGP_PahariEiJ_G0016108	Srl	99	67.104	ENSPTRG00000007712	SRL	100	96.984	Pan_troglodytes
MGP_PahariEiJ_G0016108	Srl	50	82.353	ENSPKIG00000006405	srl	93	84.389	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0016108	Srl	50	82.174	ENSPMGG00000021081	srl	95	84.199	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0016108	Srl	91	90.264	ENSPCAG00000003378	-	89	90.264	Procavia_capensis
MGP_PahariEiJ_G0016108	Srl	50	95.197	ENSPCOG00000023135	SRL	100	97.216	Propithecus_coquereli
MGP_PahariEiJ_G0016108	Srl	97	81.833	ENSPVAG00000006586	SRL	74	81.862	Pteropus_vampyrus
MGP_PahariEiJ_G0016108	Srl	57	66.111	ENSPNYG00000003423	SRL	65	65.926	Pundamilia_nyererei
MGP_PahariEiJ_G0016108	Srl	50	80.131	ENSPNAG00000023106	srl	94	82.353	Pygocentrus_nattereri
MGP_PahariEiJ_G0016108	Srl	98	88.487	ENSRNOG00000005269	Srl	98	88.938	Rattus_norvegicus
MGP_PahariEiJ_G0016108	Srl	100	69.080	ENSRBIG00000042358	SRL	98	71.172	Rhinopithecus_bieti
MGP_PahariEiJ_G0016108	Srl	100	71.504	ENSSBOG00000029273	SRL	96	96.484	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0016108	Srl	99	63.174	ENSSHAG00000011715	-	99	64.833	Sarcophilus_harrisii
MGP_PahariEiJ_G0016108	Srl	99	73.913	ENSSSCG00000007949	SRL	98	95.928	Sus_scrofa
MGP_PahariEiJ_G0016108	Srl	69	95.909	ENSTTRG00000002709	-	66	96.288	Tursiops_truncatus
MGP_PahariEiJ_G0016108	Srl	68	81.600	ENSUAMG00000005701	SRL	98	68.322	Ursus_americanus
MGP_PahariEiJ_G0016108	Srl	68	81.440	ENSUMAG00000002574	SRL	98	68.247	Ursus_maritimus
MGP_PahariEiJ_G0016108	Srl	69	80.908	ENSVVUG00000016331	-	87	68.531	Vulpes_vulpes
MGP_PahariEiJ_G0016108	Srl	50	88.017	ENSXETG00000017313	srl	98	90.498	Xenopus_tropicalis