EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0016164 (Gene tree)
Gene ID: 110329626
Gene Symbol: Rsl1d1
Alias: 2410005K20Rik
Full Name: ribosomal L1 domain containing 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 12497 bases
Position: chr12:7270139-7282635
Accession: 110329626
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0027791	Ribosomal_L1	PF00687.21	4.1e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0027792	-	758	-	-	- (aa)	-	-
MGP_PahariEiJ_T0027793	-	770	-	-	- (aa)	-	-
MGP_PahariEiJ_T0027791	-	1930	XM_021209375	MGP_PahariEiJ_P0027791	452 (aa)	XP_021065034	UPI000A30BE76

Gene Model

Click here to download MGP_PahariEiJ_G0016164's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0016164's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0016164	Rsl1d1	94	55.315	ENSG00000171490	RSL1D1	99	70.103	Homo_sapiens
MGP_PahariEiJ_G0016164	Rsl1d1	54	45.679	ENSAPOG00000004544	rsl1d1	83	41.590	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0016164	Rsl1d1	93	54.860	ENSAMEG00000009570	RSL1D1	99	54.675	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0016164	Rsl1d1	52	43.277	ENSACIG00000006608	rsl1d1	88	39.091	Amphilophus_citrinellus
MGP_PahariEiJ_G0016164	Rsl1d1	52	46.610	ENSAOCG00000001548	rsl1d1	82	40.979	Amphiprion_ocellaris
MGP_PahariEiJ_G0016164	Rsl1d1	52	46.610	ENSAPEG00000003334	rsl1d1	82	40.673	Amphiprion_percula
MGP_PahariEiJ_G0016164	Rsl1d1	52	47.034	ENSATEG00000009247	rsl1d1	84	42.202	Anabas_testudineus
MGP_PahariEiJ_G0016164	Rsl1d1	90	40.044	ENSAPLG00000004451	RSL1D1	99	39.602	Anas_platyrhynchos
MGP_PahariEiJ_G0016164	Rsl1d1	98	49.478	ENSANAG00000026520	-	97	49.254	Aotus_nancymaae
MGP_PahariEiJ_G0016164	Rsl1d1	92	53.812	ENSANAG00000028185	-	98	52.754	Aotus_nancymaae
MGP_PahariEiJ_G0016164	Rsl1d1	91	55.310	ENSANAG00000034590	-	97	54.603	Aotus_nancymaae
MGP_PahariEiJ_G0016164	Rsl1d1	72	40.367	ENSACLG00000017535	rsl1d1	85	41.159	Astatotilapia_calliptera
MGP_PahariEiJ_G0016164	Rsl1d1	77	39.155	ENSAMXG00000008624	rsl1d1	97	38.228	Astyanax_mexicanus
MGP_PahariEiJ_G0016164	Rsl1d1	99	52.567	ENSBTAG00000014588	RSL1D1	99	53.183	Bos_taurus
MGP_PahariEiJ_G0016164	Rsl1d1	91	54.767	ENSCJAG00000042606	-	97	54.681	Callithrix_jacchus
MGP_PahariEiJ_G0016164	Rsl1d1	91	54.185	ENSCJAG00000008375	-	97	55.106	Callithrix_jacchus
MGP_PahariEiJ_G0016164	Rsl1d1	93	55.895	ENSCAFG00000018865	RSL1D1	98	56.133	Canis_familiaris
MGP_PahariEiJ_G0016164	Rsl1d1	89	45.913	ENSCAFG00020002457	-	93	45.067	Canis_lupus_dingo
MGP_PahariEiJ_G0016164	Rsl1d1	98	57.582	ENSCAFG00020024488	-	98	55.789	Canis_lupus_dingo
MGP_PahariEiJ_G0016164	Rsl1d1	99	52.846	ENSCHIG00000018658	-	99	52.965	Capra_hircus
MGP_PahariEiJ_G0016164	Rsl1d1	99	54.626	ENSCHIG00000009867	-	99	54.505	Capra_hircus
MGP_PahariEiJ_G0016164	Rsl1d1	98	54.088	ENSTSYG00000009276	RSL1D1	99	53.112	Carlito_syrichta
MGP_PahariEiJ_G0016164	Rsl1d1	94	58.352	ENSCPOG00000010630	RSL1D1	96	57.906	Cavia_porcellus
MGP_PahariEiJ_G0016164	Rsl1d1	99	52.990	ENSCCAG00000017391	-	98	53.320	Cebus_capucinus
MGP_PahariEiJ_G0016164	Rsl1d1	99	51.064	ENSCCAG00000031641	-	97	50.851	Cebus_capucinus
MGP_PahariEiJ_G0016164	Rsl1d1	97	48.584	ENSCCAG00000025197	-	98	49.251	Cebus_capucinus
MGP_PahariEiJ_G0016164	Rsl1d1	90	54.587	ENSCATG00000031153	RSL1D1	96	53.696	Cercocebus_atys
MGP_PahariEiJ_G0016164	Rsl1d1	96	56.223	ENSCLAG00000010975	RSL1D1	97	58.351	Chinchilla_lanigera
MGP_PahariEiJ_G0016164	Rsl1d1	92	54.867	ENSCSAG00000008255	RSL1D1	99	54.527	Chlorocebus_sabaeus
MGP_PahariEiJ_G0016164	Rsl1d1	74	64.045	ENSCHOG00000010827	RSL1D1	73	64.045	Choloepus_hoffmanni
MGP_PahariEiJ_G0016164	Rsl1d1	53	53.975	ENSCPBG00000004564	RSL1D1	92	55.556	Chrysemys_picta_bellii
MGP_PahariEiJ_G0016164	Rsl1d1	94	56.136	ENSCANG00000029202	RSL1D1	99	55.144	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0016164	Rsl1d1	96	70.068	ENSCGRG00001014989	Rsl1d1	100	71.744	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0016164	Rsl1d1	96	70.068	ENSCGRG00000001905	Rsl1d1	100	71.744	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0016164	Rsl1d1	52	46.218	ENSCSEG00000019693	rsl1d1	64	46.218	Cynoglossus_semilaevis
MGP_PahariEiJ_G0016164	Rsl1d1	66	42.244	ENSCVAG00000000672	rsl1d1	82	40.061	Cyprinodon_variegatus
MGP_PahariEiJ_G0016164	Rsl1d1	60	41.758	ENSDARG00000055868	rsl1d1	95	36.935	Danio_rerio
MGP_PahariEiJ_G0016164	Rsl1d1	98	48.880	ENSDNOG00000004601	-	98	48.560	Dasypus_novemcinctus
MGP_PahariEiJ_G0016164	Rsl1d1	98	48.485	ENSDNOG00000040779	-	99	48.163	Dasypus_novemcinctus
MGP_PahariEiJ_G0016164	Rsl1d1	66	45.048	ENSDNOG00000047567	-	91	47.097	Dasypus_novemcinctus
MGP_PahariEiJ_G0016164	Rsl1d1	98	48.643	ENSDORG00000013432	-	99	48.989	Dipodomys_ordii
MGP_PahariEiJ_G0016164	Rsl1d1	52	45.378	ENSEBUG00000005400	-	57	45.378	Eptatretus_burgeri
MGP_PahariEiJ_G0016164	Rsl1d1	93	54.428	ENSEASG00005011499	RSL1D1	99	54.898	Equus_asinus_asinus
MGP_PahariEiJ_G0016164	Rsl1d1	93	53.996	ENSECAG00000025036	RSL1D1	99	54.286	Equus_caballus
MGP_PahariEiJ_G0016164	Rsl1d1	71	63.441	ENSEEUG00000015569	-	79	63.441	Erinaceus_europaeus
MGP_PahariEiJ_G0016164	Rsl1d1	72	41.284	ENSELUG00000019243	rsl1d1	81	45.378	Esox_lucius
MGP_PahariEiJ_G0016164	Rsl1d1	98	56.818	ENSFCAG00000010114	RSL1D1	98	57.708	Felis_catus
MGP_PahariEiJ_G0016164	Rsl1d1	91	40.449	ENSFALG00000003869	RSL1D1	90	40.090	Ficedula_albicollis
MGP_PahariEiJ_G0016164	Rsl1d1	97	58.824	ENSFDAG00000011414	RSL1D1	97	58.730	Fukomys_damarensis
MGP_PahariEiJ_G0016164	Rsl1d1	56	43.874	ENSFHEG00000017235	rsl1d1	84	37.861	Fundulus_heteroclitus
MGP_PahariEiJ_G0016164	Rsl1d1	54	46.939	ENSGMOG00000013048	rsl1d1	86	46.939	Gadus_morhua
MGP_PahariEiJ_G0016164	Rsl1d1	54	52.459	ENSGALG00000033690	RSL1D1	96	41.629	Gallus_gallus
MGP_PahariEiJ_G0016164	Rsl1d1	52	47.458	ENSGAFG00000020794	rsl1d1	78	41.212	Gambusia_affinis
MGP_PahariEiJ_G0016164	Rsl1d1	58	44.030	ENSGACG00000004483	rsl1d1	77	43.820	Gasterosteus_aculeatus
MGP_PahariEiJ_G0016164	Rsl1d1	94	54.664	ENSGGOG00000013463	RSL1D1	99	54.433	Gorilla_gorilla
MGP_PahariEiJ_G0016164	Rsl1d1	72	41.284	ENSHBUG00000001551	rsl1d1	84	40.979	Haplochromis_burtoni
MGP_PahariEiJ_G0016164	Rsl1d1	99	58.370	ENSHGLG00000006774	RSL1D1	99	58.370	Heterocephalus_glaber_female
MGP_PahariEiJ_G0016164	Rsl1d1	99	58.150	ENSHGLG00100017781	RSL1D1	99	58.150	Heterocephalus_glaber_male
MGP_PahariEiJ_G0016164	Rsl1d1	53	43.515	ENSHCOG00000015208	rsl1d1	68	43.515	Hippocampus_comes
MGP_PahariEiJ_G0016164	Rsl1d1	89	38.425	ENSIPUG00000001677	rsl1d1	99	37.346	Ictalurus_punctatus
MGP_PahariEiJ_G0016164	Rsl1d1	85	56.532	ENSSTOG00000015400	RSL1D1	99	56.501	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0016164	Rsl1d1	90	58.588	ENSJJAG00000012115	Rsl1d1	99	57.556	Jaculus_jaculus
MGP_PahariEiJ_G0016164	Rsl1d1	54	42.857	ENSLBEG00000001076	rsl1d1	93	36.438	Labrus_bergylta
MGP_PahariEiJ_G0016164	Rsl1d1	52	46.639	ENSLOCG00000007416	rsl1d1	57	46.639	Lepisosteus_oculatus
MGP_PahariEiJ_G0016164	Rsl1d1	94	54.649	ENSLAFG00000013664	RSL1D1	94	53.333	Loxodonta_africana
MGP_PahariEiJ_G0016164	Rsl1d1	92	56.570	ENSMFAG00000037288	RSL1D1	99	55.556	Macaca_fascicularis
MGP_PahariEiJ_G0016164	Rsl1d1	92	56.570	ENSMMUG00000019632	RSL1D1	99	70.701	Macaca_mulatta
MGP_PahariEiJ_G0016164	Rsl1d1	92	56.347	ENSMNEG00000044196	RSL1D1	99	55.350	Macaca_nemestrina
MGP_PahariEiJ_G0016164	Rsl1d1	92	57.143	ENSMLEG00000042058	RSL1D1	99	55.670	Mandrillus_leucophaeus
MGP_PahariEiJ_G0016164	Rsl1d1	52	44.915	ENSMAMG00000004385	rsl1d1	83	40.367	Mastacembelus_armatus
MGP_PahariEiJ_G0016164	Rsl1d1	72	39.144	ENSMZEG00005007150	rsl1d1	85	40.979	Maylandia_zebra
MGP_PahariEiJ_G0016164	Rsl1d1	89	43.552	ENSMGAG00000000863	RSL1D1	95	43.499	Meleagris_gallopavo
MGP_PahariEiJ_G0016164	Rsl1d1	100	51.844	ENSMICG00000008229	RSL1D1	100	51.844	Microcebus_murinus
MGP_PahariEiJ_G0016164	Rsl1d1	95	72.222	ENSMOCG00000017724	Rsl1d1	99	69.231	Microtus_ochrogaster
MGP_PahariEiJ_G0016164	Rsl1d1	52	42.437	ENSMMOG00000003730	rsl1d1	79	43.277	Mola_mola
MGP_PahariEiJ_G0016164	Rsl1d1	81	46.335	ENSMODG00000004625	-	81	46.094	Monodelphis_domestica
MGP_PahariEiJ_G0016164	Rsl1d1	85	40.769	ENSMODG00000029494	-	82	40.256	Monodelphis_domestica
MGP_PahariEiJ_G0016164	Rsl1d1	52	45.763	ENSMALG00000009531	rsl1d1	84	40.367	Monopterus_albus
MGP_PahariEiJ_G0016164	Rsl1d1	100	92.053	ENSMUSG00000005846	Rsl1d1	100	90.728	Mus_musculus
MGP_PahariEiJ_G0016164	Rsl1d1	100	92.274	MGP_SPRETEiJ_G0021352	Rsl1d1	100	90.949	Mus_spretus
MGP_PahariEiJ_G0016164	Rsl1d1	95	54.071	ENSMPUG00000014548	RSL1D1	99	54.819	Mustela_putorius_furo
MGP_PahariEiJ_G0016164	Rsl1d1	98	54.527	ENSMLUG00000000784	RSL1D1	98	54.733	Myotis_lucifugus
MGP_PahariEiJ_G0016164	Rsl1d1	92	66.820	ENSNGAG00000009086	-	100	63.341	Nannospalax_galili
MGP_PahariEiJ_G0016164	Rsl1d1	92	63.146	ENSNGAG00000013578	-	99	63.146	Nannospalax_galili
MGP_PahariEiJ_G0016164	Rsl1d1	52	45.339	ENSNBRG00000002777	rsl1d1	84	40.367	Neolamprologus_brichardi
MGP_PahariEiJ_G0016164	Rsl1d1	73	57.971	ENSNLEG00000012149	-	96	58.242	Nomascus_leucogenys
MGP_PahariEiJ_G0016164	Rsl1d1	92	56.236	ENSNLEG00000010196	-	99	54.878	Nomascus_leucogenys
MGP_PahariEiJ_G0016164	Rsl1d1	100	53.027	ENSOPRG00000004442	-	100	53.236	Ochotona_princeps
MGP_PahariEiJ_G0016164	Rsl1d1	52	46.186	ENSONIG00000019757	rsl1d1	87	42.378	Oreochromis_niloticus
MGP_PahariEiJ_G0016164	Rsl1d1	89	43.478	ENSOANG00000009408	-	92	43.237	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0016164	Rsl1d1	92	56.473	ENSOCUG00000004751	RSL1D1	97	55.720	Oryctolagus_cuniculus
MGP_PahariEiJ_G0016164	Rsl1d1	52	42.373	ENSORLG00000002877	rsl1d1	97	35.233	Oryzias_latipes
MGP_PahariEiJ_G0016164	Rsl1d1	59	39.493	ENSORLG00020006636	rsl1d1	78	39.483	Oryzias_latipes_hni
MGP_PahariEiJ_G0016164	Rsl1d1	59	39.493	ENSORLG00015005427	rsl1d1	78	39.483	Oryzias_latipes_hsok
MGP_PahariEiJ_G0016164	Rsl1d1	99	53.498	ENSOGAG00000015151	RSL1D1	99	52.738	Otolemur_garnettii
MGP_PahariEiJ_G0016164	Rsl1d1	99	52.138	ENSOARG00000006923	RSL1D1	99	53.388	Ovis_aries
MGP_PahariEiJ_G0016164	Rsl1d1	94	54.957	ENSPPAG00000039716	RSL1D1	99	54.601	Pan_paniscus
MGP_PahariEiJ_G0016164	Rsl1d1	93	57.267	ENSPPRG00000005220	RSL1D1	98	57.588	Panthera_pardus
MGP_PahariEiJ_G0016164	Rsl1d1	90	57.045	ENSPTIG00000005526	RSL1D1	92	57.500	Panthera_tigris_altaica
MGP_PahariEiJ_G0016164	Rsl1d1	94	54.741	ENSPTRG00000007777	RSL1D1	99	54.397	Pan_troglodytes
MGP_PahariEiJ_G0016164	Rsl1d1	92	56.347	ENSPANG00000023073	RSL1D1	99	55.144	Papio_anubis
MGP_PahariEiJ_G0016164	Rsl1d1	62	41.135	ENSPKIG00000022687	rsl1d1	98	34.803	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0016164	Rsl1d1	54	54.508	ENSPSIG00000011642	RSL1D1	96	42.377	Pelodiscus_sinensis
MGP_PahariEiJ_G0016164	Rsl1d1	53	44.813	ENSPMGG00000022261	rsl1d1	97	38.272	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0016164	Rsl1d1	96	72.336	ENSPEMG00000009523	Rsl1d1	97	73.016	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0016164	Rsl1d1	82	47.059	ENSPCIG00000026851	-	87	46.791	Phascolarctos_cinereus
MGP_PahariEiJ_G0016164	Rsl1d1	72	39.286	ENSPFOG00000005017	rsl1d1	92	40.179	Poecilia_formosa
MGP_PahariEiJ_G0016164	Rsl1d1	52	47.458	ENSPLAG00000000482	rsl1d1	70	40.729	Poecilia_latipinna
MGP_PahariEiJ_G0016164	Rsl1d1	72	40.979	ENSPMEG00000007032	rsl1d1	79	40.426	Poecilia_mexicana
MGP_PahariEiJ_G0016164	Rsl1d1	54	46.122	ENSPREG00000016619	rsl1d1	74	40.248	Poecilia_reticulata
MGP_PahariEiJ_G0016164	Rsl1d1	93	55.870	ENSPPYG00000007112	RSL1D1	99	55.579	Pongo_abelii
MGP_PahariEiJ_G0016164	Rsl1d1	95	51.370	ENSPPYG00000019335	-	97	51.927	Pongo_abelii
MGP_PahariEiJ_G0016164	Rsl1d1	81	50.758	ENSPCAG00000011264	-	83	50.758	Procavia_capensis
MGP_PahariEiJ_G0016164	Rsl1d1	76	55.125	ENSPCOG00000022456	RSL1D1	99	54.712	Propithecus_coquereli
MGP_PahariEiJ_G0016164	Rsl1d1	98	52.381	ENSPVAG00000005014	RSL1D1	99	53.236	Pteropus_vampyrus
MGP_PahariEiJ_G0016164	Rsl1d1	52	45.339	ENSPNYG00000002850	rsl1d1	84	40.673	Pundamilia_nyererei
MGP_PahariEiJ_G0016164	Rsl1d1	82	39.785	ENSPNAG00000011848	rsl1d1	91	40.054	Pygocentrus_nattereri
MGP_PahariEiJ_G0016164	Rsl1d1	71	71.651	ENSRNOG00000032439	Rsl1d1	52	72.414	Rattus_norvegicus
MGP_PahariEiJ_G0016164	Rsl1d1	100	82.675	ENSRNOG00000048608	Rsl1d1l1	99	82.675	Rattus_norvegicus
MGP_PahariEiJ_G0016164	Rsl1d1	100	82.675	ENSRNOG00000061236	LOC108348298	99	82.675	Rattus_norvegicus
MGP_PahariEiJ_G0016164	Rsl1d1	92	56.444	ENSRBIG00000030317	RSL1D1	99	55.967	Rhinopithecus_bieti
MGP_PahariEiJ_G0016164	Rsl1d1	95	55.965	ENSRROG00000033658	RSL1D1	99	55.967	Rhinopithecus_roxellana
MGP_PahariEiJ_G0016164	Rsl1d1	74	46.524	ENSSBOG00000029329	-	86	47.978	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0016164	Rsl1d1	95	49.576	ENSSBOG00000028384	-	97	50.422	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0016164	Rsl1d1	91	54.102	ENSSBOG00000035910	-	98	54.149	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0016164	Rsl1d1	52	49.580	ENSSFOG00015011354	rsl1d1	69	49.580	Scleropages_formosus
MGP_PahariEiJ_G0016164	Rsl1d1	51	44.156	ENSSMAG00000007957	rsl1d1	66	44.156	Scophthalmus_maximus
MGP_PahariEiJ_G0016164	Rsl1d1	52	44.492	ENSSDUG00000008447	rsl1d1	76	40.367	Seriola_dumerili
MGP_PahariEiJ_G0016164	Rsl1d1	52	44.915	ENSSLDG00000008293	rsl1d1	82	40.673	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0016164	Rsl1d1	92	39.602	ENSSPUG00000007525	RSL1D1	96	39.381	Sphenodon_punctatus
MGP_PahariEiJ_G0016164	Rsl1d1	52	45.763	ENSSPAG00000009755	rsl1d1	83	40.303	Stegastes_partitus
MGP_PahariEiJ_G0016164	Rsl1d1	94	53.928	ENSSSCG00000023984	RSL1D1	99	53.737	Sus_scrofa
MGP_PahariEiJ_G0016164	Rsl1d1	54	53.279	ENSTGUG00000005174	RSL1D1	99	53.279	Taeniopygia_guttata
MGP_PahariEiJ_G0016164	Rsl1d1	53	45.267	ENSTRUG00000016970	rsl1d1	68	45.267	Takifugu_rubripes
MGP_PahariEiJ_G0016164	Rsl1d1	69	37.791	ENSTNIG00000012925	rsl1d1	83	38.209	Tetraodon_nigroviridis
MGP_PahariEiJ_G0016164	Rsl1d1	81	48.039	ENSTBEG00000014678	RSL1D1	99	47.549	Tupaia_belangeri
MGP_PahariEiJ_G0016164	Rsl1d1	84	56.533	ENSTTRG00000011629	RSL1D1	87	55.687	Tursiops_truncatus
MGP_PahariEiJ_G0016164	Rsl1d1	93	56.782	ENSUAMG00000004470	RSL1D1	99	53.939	Ursus_americanus
MGP_PahariEiJ_G0016164	Rsl1d1	85	50.327	ENSUMAG00000003994	RSL1D1	99	52.298	Ursus_maritimus
MGP_PahariEiJ_G0016164	Rsl1d1	91	52.706	ENSVVUG00000024962	-	94	52.423	Vulpes_vulpes
MGP_PahariEiJ_G0016164	Rsl1d1	93	55.531	ENSVVUG00000018170	-	98	56.133	Vulpes_vulpes
MGP_PahariEiJ_G0016164	Rsl1d1	79	42.936	ENSXETG00000033365	-	75	42.936	Xenopus_tropicalis
MGP_PahariEiJ_G0016164	Rsl1d1	51	46.552	ENSXMAG00000025111	rsl1d1	67	46.552	Xiphophorus_maculatus